RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 SLBPQ14493 270 aaKnown RBP eCLIP11.03□□□□□ -0.64
TTC28-203ENST00000442232 ZXDCQ2QGD7 858 aaPredicted RBP11.03□□□□□ -0.64
TTC28-203ENST00000442232 TRIM40Q6P9F5 258 aa11.03□□□□□ -0.64
TTC28-203ENST00000442232 XKRXQ6PP77 449 aa11.03□□□□□ -0.64
TTC28-203ENST00000442232 TMIGD1Q6UXZ0 262 aa11.03□□□□□ -0.64
TTC28-203ENST00000442232 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.03□□□□□ -0.64
TTC28-203ENST00000442232 CREG2Q8IUH2 290 aa11.03□□□□□ -0.64
TTC28-203ENST00000442232 MCEMP1Q8IX19 187 aa11.03□□□□□ -0.64
TTC28-203ENST00000442232 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.03□□□□□ -0.64
TTC28-203ENST00000442232 CA13Q8N1Q1 262 aa11.03□□□□□ -0.64
TTC28-203ENST00000442232 KIF2BQ8N4N8 673 aa11.03□□□□□ -0.64
TTC28-203ENST00000442232 SNX31Q8N9S9 440 aa11.03□□□□□ -0.64
TTC28-203ENST00000442232 PYROXD1Q8WU10 500 aa11.03□□□□□ -0.64
TTC28-203ENST00000442232 SEC16BQ96JE7 1060 aa11.03□□□□□ -0.64
TTC28-203ENST00000442232 FRMD6Q96NE9 622 aa11.03□□□□□ -0.64
TTC28-203ENST00000442232 NPAS2Q99743 824 aa11.03□□□□□ -0.64
TTC28-203ENST00000442232 WDR83Q9BRX9 315 aaKnown RBP11.03□□□□□ -0.64
TTC28-203ENST00000442232 NPLQ9BXD5 320 aaPredicted RBP11.03□□□□□ -0.64
TTC28-203ENST00000442232 UNKQ9C0B0 810 aaKnown RBP11.03□□□□□ -0.64
TTC28-203ENST00000442232 PITHD1Q9GZP4 211 aaPredicted RBP11.03□□□□□ -0.64
TTC28-203ENST00000442232 KCNF1Q9H3M0 494 aa11.03□□□□□ -0.64
TTC28-203ENST00000442232 KLHL31Q9H511 634 aa11.03□□□□□ -0.64
TTC28-203ENST00000442232 RNF14Q9UBS8 474 aa11.03□□□□□ -0.64
TTC28-203ENST00000442232 TINAGQ9UJW2 476 aa11.03□□□□□ -0.64
TTC28-203ENST00000442232 FBXW2Q9UKT8 454 aa11.03□□□□□ -0.64
TTC28-203ENST00000442232 IKZF3Q9UKT9 509 aa11.03□□□□□ -0.64
TTC28-203ENST00000442232 NPIPA1Q9UND3 350 aa11.03□□□□□ -0.64
TTC28-203ENST00000442232 KLF13Q9Y2Y9 288 aaPredicted RBP11.03□□□□□ -0.64
TTC28-203ENST00000442232 TRBV11-1A0A0K0K1C0 115 aa11.02□□□□□ -0.65
TTC28-203ENST00000442232 TFECO14948 347 aaPredicted RBP11.02□□□□□ -0.65
TTC28-203ENST00000442232 MAN1A2O60476 641 aa11.02□□□□□ -0.65
TTC28-203ENST00000442232 NEURL1O76050 574 aa11.02□□□□□ -0.65
TTC28-203ENST00000442232 MYO1DO94832 1006 aa11.02□□□□□ -0.65
TTC28-203ENST00000442232 PTGER4P35408 488 aa11.02□□□□□ -0.65
TTC28-203ENST00000442232 HLCSP50747 726 aa11.02□□□□□ -0.65
TTC28-203ENST00000442232 RAB38P57729 211 aa11.02□□□□□ -0.65
TTC28-203ENST00000442232 MLF1P58340 268 aa11.02□□□□□ -0.65
TTC28-203ENST00000442232 BTG2P78543 158 aa11.02□□□□□ -0.65
TTC28-203ENST00000442232 SLC13A2Q13183 592 aa11.02□□□□□ -0.65
TTC28-203ENST00000442232 FASTKD3Q14CZ7 662 aaKnown RBP11.02□□□□□ -0.65
TTC28-203ENST00000442232 TERF2Q15554 542 aa11.02□□□□□ -0.65
TTC28-203ENST00000442232 TGFBIQ15582 683 aa11.02□□□□□ -0.65
TTC28-203ENST00000442232 C3AR1Q16581 482 aa11.02□□□□□ -0.65
TTC28-203ENST00000442232 GDF7Q7Z4P5 450 aa11.02□□□□□ -0.65
TTC28-203ENST00000442232 GPSM1Q86YR5 675 aa11.02□□□□□ -0.65
TTC28-203ENST00000442232 SPPL2CQ8IUH8 684 aa11.02□□□□□ -0.65
TTC28-203ENST00000442232 KLHDC8AQ8IYD2 350 aa11.02□□□□□ -0.65
TTC28-203ENST00000442232 TMEM156Q8N614 296 aa11.02□□□□□ -0.65
TTC28-203ENST00000442232 POGLUT1Q8NBL1 392 aa11.02□□□□□ -0.65
TTC28-203ENST00000442232 B3GNT7Q8NFL0 401 aa11.02□□□□□ -0.65
TTC28-203ENST00000442232 CREB3L4Q8TEY5 395 aa11.02□□□□□ -0.65
TTC28-203ENST00000442232 RHBDF1Q96CC6 855 aa11.02□□□□□ -0.65
TTC28-203ENST00000442232 VMP1Q96GC9 406 aa11.02□□□□□ -0.65
TTC28-203ENST00000442232 PDLIM2Q96JY6 352 aa11.02□□□□□ -0.65
TTC28-203ENST00000442232 KRT12Q99456 494 aa11.02□□□□□ -0.65
TTC28-203ENST00000442232 DERL2Q9GZP9 239 aa11.02□□□□□ -0.65
TTC28-203ENST00000442232 NECTIN3Q9NQS3 549 aa11.02□□□□□ -0.65
TTC28-203ENST00000442232 PRTFDC1Q9NRG1 225 aa11.02□□□□□ -0.65
TTC28-203ENST00000442232 PNO1Q9NRX1 252 aaKnown RBP11.02□□□□□ -0.65
TTC28-203ENST00000442232 DNAJC11Q9NVH1 559 aa11.02□□□□□ -0.65
TTC28-203ENST00000442232 GPRC5BQ9NZH0 403 aa11.02□□□□□ -0.65
TTC28-203ENST00000442232 SNX24Q9Y343 169 aa11.02□□□□□ -0.65
TTC28-203ENST00000442232 PCNX1Q96RV3 2341 aa11.02□□□□□ -0.65
TTC28-203ENST00000442232 ABCA12Q86UK0 2595 aa11.02□□□□□ -0.65
TTC28-203ENST00000442232 LRBAP50851 2863 aa11.02□□□□□ -0.65
TTC28-203ENST00000442232 GTF3C1Q12789 2109 aa11.02□□□□□ -0.65
TTC28-203ENST00000442232 IGKV3D-11A0A0A0MRZ8 115 aa11.01□□□□□ -0.65
TTC28-203ENST00000442232 A0A0G2JN53 185 aa11.01□□□□□ -0.65
TTC28-203ENST00000442232 E7ESA3 106 aa11.01□□□□□ -0.65
TTC28-203ENST00000442232 KLRC4-KLRK1H3BQV0 150 aa11.01□□□□□ -0.65
TTC28-203ENST00000442232 PRRG2O14669 202 aa11.01□□□□□ -0.65
TTC28-203ENST00000442232 ASNA1O43681 348 aa11.01□□□□□ -0.65
TTC28-203ENST00000442232 DNAJB6O75190 326 aa11.01□□□□□ -0.65
TTC28-203ENST00000442232 CLEC3AO75596 197 aa11.01□□□□□ -0.65
TTC28-203ENST00000442232 CCDC166P0CW27 439 aa11.01□□□□□ -0.65
TTC28-203ENST00000442232 SMIM10L1P0DMW3 83 aa11.01□□□□□ -0.65
TTC28-203ENST00000442232 STMN1P16949 149 aa11.01□□□□□ -0.65
TTC28-203ENST00000442232 AGAP20933 346 aa11.01□□□□□ -0.65
TTC28-203ENST00000442232 TRHRP34981 398 aaPredicted RBP11.01□□□□□ -0.65
TTC28-203ENST00000442232 GDF5P43026 501 aa11.01□□□□□ -0.65
TTC28-203ENST00000442232 RPL21P46778 160 aaKnown RBP11.01□□□□□ -0.65
TTC28-203ENST00000442232 SLC6A12P48065 614 aa11.01□□□□□ -0.65
TTC28-203ENST00000442232 HSD17B7P56937 341 aa11.01□□□□□ -0.65
TTC28-203ENST00000442232 ATP6V0D1P61421 351 aa11.01□□□□□ -0.65
TTC28-203ENST00000442232 HYAL2Q12891 473 aa11.01□□□□□ -0.65
TTC28-203ENST00000442232 PDK4Q16654 411 aa11.01□□□□□ -0.65
TTC28-203ENST00000442232 HIST2H2ACQ16777 129 aaPredicted RBP11.01□□□□□ -0.65
TTC28-203ENST00000442232 XKR6Q5GH73 641 aa11.01□□□□□ -0.65
TTC28-203ENST00000442232 PAGE2BQ5JRK9 111 aa11.01□□□□□ -0.65
TTC28-203ENST00000442232 HIST2H2AA3Q6FI13 130 aa11.01□□□□□ -0.65
TTC28-203ENST00000442232 SLCO4C1Q6ZQN7 724 aa11.01□□□□□ -0.65
TTC28-203ENST00000442232 MAATS1Q7Z4T9 603 aa11.01□□□□□ -0.65
TTC28-203ENST00000442232 CEP97Q8IW35 865 aa11.01□□□□□ -0.65
TTC28-203ENST00000442232 ZNF595Q8IYB9 648 aa11.01□□□□□ -0.65
TTC28-203ENST00000442232 CYP4Z2PQ8N1L4 340 aa11.01□□□□□ -0.65
TTC28-203ENST00000442232 CPSF7Q8N684 471 aaKnown RBP11.01□□□□□ -0.65
TTC28-203ENST00000442232 FAM47BQ8NA70 645 aa11.01□□□□□ -0.65
TTC28-203ENST00000442232 ANKRD49Q8WVL7 239 aa11.01□□□□□ -0.65
TTC28-203ENST00000442232 SMIM10Q96HG1 83 aa11.01□□□□□ -0.65
TTC28-203ENST00000442232 CPNE1Q99829 537 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms