RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 DMRT3Q9NQL9 472 aa14.2□□□□□ -0.14
CSNK1E-210ENST00000442216 MKL2Q9ULH7 1088 aa14.2□□□□□ -0.14
CSNK1E-210ENST00000442216 PLLPQ9Y342 182 aa14.2□□□□□ -0.14
CSNK1E-210ENST00000442216 PCDHGA9Q9Y5G4 932 aaKnown RBP14.2□□□□□ -0.14
CSNK1E-210ENST00000442216 CHD6Q8TD26 2715 aa14.2□□□□□ -0.14
CSNK1E-210ENST00000442216 IGSF10Q6WRI0 2623 aa14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 ZNF860A6NHJ4 632 aa14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 H3BQF6 201 aa14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 FFAR3O14843 346 aa14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 GPR42O15529 346 aa14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 B3GALT2O43825 422 aa14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 ALOX12BO75342 701 aa14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 SCELO95171 688 aa14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 MLYCDO95822 493 aa14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 FHP07954 510 aa14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 RNH1P13489 461 aaKnown RBP14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 ACPPP15309 386 aa14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 PTX3P26022 381 aaPredicted RBP14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 ARL1P40616 181 aaPredicted RBP14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 MTTPP55157 894 aa14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 CDH13P55290 713 aa14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 ZNF844Q08AG5 666 aa14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 AIMP2Q13155 320 aaKnown RBP14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 CUL3Q13618 768 aa14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 LY6DQ14210 128 aa14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 RCN2Q14257 317 aa14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 ZRSR2Q15696 482 aaKnown RBP14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 KHDRBS2Q5VWX1 349 aaKnown RBP14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 LRIG3Q6UXM1 1119 aa14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 SRRM1Q8IYB3 904 aaKnown RBP14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 PRSS58Q8IYP2 241 aa14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 CA13Q8N1Q1 262 aa14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 CLEC1AQ8NC01 280 aa14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 OR4F6Q8NGB9 312 aa14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 OR11G2Q8NGC1 345 aa14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 METTL21AQ8WXB1 218 aa14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 PEX11GQ96HA9 241 aa14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 CDK15Q96Q40 435 aa14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 F2RL3Q96RI0 385 aa14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 SMC6Q96SB8 1091 aa14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 ZNF382Q96SR6 550 aa14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 TRIM55Q9BYV6 548 aa14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 VN1R1Q9GZP7 353 aa14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 SLC25A18Q9H1K4 315 aa14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 COPS7BQ9H9Q2 264 aaPredicted RBP14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 ATP13A2Q9NQ11 1180 aa14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 PRDM7Q9NQW5 492 aa14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 LANCL2Q9NS86 450 aa14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 OXSMQ9NWU1 459 aa14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 C19orf25Q9UFG5 118 aaPredicted RBP14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 TRPS1Q9UHF7 1281 aa14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 G3BP2Q9UN86 482 aaKnown RBP14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 PCDHGB7Q9Y5F8 929 aa14.19□□□□□ -0.14
CSNK1E-210ENST00000442216 COL6A6A6NMZ7 2263 aa14.18□□□□□ -0.14
CSNK1E-210ENST00000442216 ZFYVE26Q68DK2 2539 aa14.18□□□□□ -0.14
CSNK1E-210ENST00000442216 B3GALT4O96024 378 aa14.18□□□□□ -0.14
CSNK1E-210ENST00000442216 HPP00738 406 aa14.18□□□□□ -0.14
CSNK1E-210ENST00000442216 TGFB1P01137 390 aa14.18□□□□□ -0.14
CSNK1E-210ENST00000442216 C8orf89P0DMQ9 161 aa14.18□□□□□ -0.14
CSNK1E-210ENST00000442216 CPA3P15088 417 aa14.18□□□□□ -0.14
CSNK1E-210ENST00000442216 PLA2G16P53816 162 aa14.18□□□□□ -0.14
CSNK1E-210ENST00000442216 PKNOX1P55347 436 aa14.18□□□□□ -0.14
CSNK1E-210ENST00000442216 MINDY4Q4G0A6 757 aa14.18□□□□□ -0.14
CSNK1E-210ENST00000442216 FRG2Q64ET8 278 aa14.18□□□□□ -0.14
CSNK1E-210ENST00000442216 CPZQ66K79 652 aa14.18□□□□□ -0.14
CSNK1E-210ENST00000442216 TCTN3Q6NUS6 607 aa14.18□□□□□ -0.14
CSNK1E-210ENST00000442216 CCDC63Q8NA47 563 aa14.18□□□□□ -0.14
CSNK1E-210ENST00000442216 TRPC4APQ8TEL6 797 aa14.18□□□□□ -0.14
CSNK1E-210ENST00000442216 RGMAQ96B86 450 aa14.18□□□□□ -0.14
CSNK1E-210ENST00000442216 ABHD17AQ96GS6 310 aa14.18□□□□□ -0.14
CSNK1E-210ENST00000442216 ZIM3Q96PE6 472 aa14.18□□□□□ -0.14
CSNK1E-210ENST00000442216 FRG2BQ96QU4 278 aa14.18□□□□□ -0.14
CSNK1E-210ENST00000442216 MTERF1Q99551 399 aaKnown RBP14.18□□□□□ -0.14
CSNK1E-210ENST00000442216 MLXIPLQ9NP71 852 aa14.18□□□□□ -0.14
CSNK1E-210ENST00000442216 FBXL4Q9UKA2 621 aa14.18□□□□□ -0.14
CSNK1E-210ENST00000442216 SNX6Q9UNH7 406 aa14.18□□□□□ -0.14
CSNK1E-210ENST00000442216 TNRC6AQ8NDV7 1962 aaKnown RBP14.17□□□□□ -0.14
CSNK1E-210ENST00000442216 SYNDIG1LA6NDD5 238 aa14.17□□□□□ -0.14
CSNK1E-210ENST00000442216 EIF4E1BA6NMX2 242 aaKnown RBP14.17□□□□□ -0.14
CSNK1E-210ENST00000442216 MAGEB17A8MXT2 336 aa14.17□□□□□ -0.14
CSNK1E-210ENST00000442216 PSMD12O00232 456 aaPredicted RBP14.17□□□□□ -0.14
CSNK1E-210ENST00000442216 RGS16O15492 202 aaPredicted RBP14.17□□□□□ -0.14
CSNK1E-210ENST00000442216 DNAJB6O75190 326 aa14.17□□□□□ -0.14
CSNK1E-210ENST00000442216 JRKO75564 520 aa14.17□□□□□ -0.14
CSNK1E-210ENST00000442216 CCL11P51671 97 aa14.17□□□□□ -0.14
CSNK1E-210ENST00000442216 RAB38P57729 211 aa14.17□□□□□ -0.14
CSNK1E-210ENST00000442216 RPS13P62277 151 aaKnown RBP14.17□□□□□ -0.14
CSNK1E-210ENST00000442216 OLR1P78380 273 aa14.17□□□□□ -0.14
CSNK1E-210ENST00000442216 RHAGQ02094 409 aa14.17□□□□□ -0.14
CSNK1E-210ENST00000442216 ZNF33BQ06732 778 aa14.17□□□□□ -0.14
CSNK1E-210ENST00000442216 ASPHQ12797 758 aa14.17□□□□□ -0.14
CSNK1E-210ENST00000442216 LCP2Q13094 533 aa14.17□□□□□ -0.14
CSNK1E-210ENST00000442216 IFT88Q13099 833 aa14.17□□□□□ -0.14
CSNK1E-210ENST00000442216 DDX39BQ13838 428 aaKnown RBP14.17□□□□□ -0.14
CSNK1E-210ENST00000442216 AP5B1Q2VPB7 878 aa14.17□□□□□ -0.14
CSNK1E-210ENST00000442216 BEND6Q5SZJ8 279 aaPredicted RBP14.17□□□□□ -0.14
CSNK1E-210ENST00000442216 MFSD4BQ5TF39 518 aa14.17□□□□□ -0.14
CSNK1E-210ENST00000442216 LIPMQ5VYY2 423 aa14.17□□□□□ -0.14
CSNK1E-210ENST00000442216 TTC19Q6DKK2 380 aaPredicted RBP14.17□□□□□ -0.14
CSNK1E-210ENST00000442216 OR4C11Q6IEV9 310 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms