RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 SNRPB2P08579 225 aaKnown RBP19.39■□□□□ 0.69
CPNE1-219ENST00000440240 GSTM2P28161 218 aa19.39■□□□□ 0.69
CPNE1-219ENST00000440240 HPDP32754 393 aaPredicted RBP19.39■□□□□ 0.69
CPNE1-219ENST00000440240 CLCN2P51788 898 aa19.39■□□□□ 0.69
CPNE1-219ENST00000440240 BTN3A2P78410 334 aa19.39■□□□□ 0.69
CPNE1-219ENST00000440240 TERF2Q15554 542 aa19.39■□□□□ 0.69
CPNE1-219ENST00000440240 TMIGD1Q6UXZ0 262 aa19.39■□□□□ 0.69
CPNE1-219ENST00000440240 FRA10AC1Q70Z53 315 aa19.39■□□□□ 0.69
CPNE1-219ENST00000440240 ADAMTSL2Q86TH1 951 aa19.39■□□□□ 0.69
CPNE1-219ENST00000440240 ZNF227Q86WZ6 799 aa19.39■□□□□ 0.69
CPNE1-219ENST00000440240 KLHL7Q8IXQ5 586 aa19.39■□□□□ 0.69
CPNE1-219ENST00000440240 CA13Q8N1Q1 262 aa19.39■□□□□ 0.69
CPNE1-219ENST00000440240 CPSF7Q8N684 471 aaKnown RBP19.39■□□□□ 0.69
CPNE1-219ENST00000440240 B3GNT7Q8NFL0 401 aa19.39■□□□□ 0.69
CPNE1-219ENST00000440240 GAL3ST3Q96A11 431 aa19.39■□□□□ 0.69
CPNE1-219ENST00000440240 SEC16BQ96JE7 1060 aa19.39■□□□□ 0.69
CPNE1-219ENST00000440240 WDR83Q9BRX9 315 aaKnown RBP19.39■□□□□ 0.69
CPNE1-219ENST00000440240 NPLQ9BXD5 320 aaPredicted RBP19.39■□□□□ 0.69
CPNE1-219ENST00000440240 TRMT1Q9NXH9 659 aaKnown RBP19.39■□□□□ 0.69
CPNE1-219ENST00000440240 NSMCE4AQ9NXX6 385 aa19.39■□□□□ 0.69
CPNE1-219ENST00000440240 TEP1Q99973 2627 aaKnown RBP19.39■□□□□ 0.69
CPNE1-219ENST00000440240 GTF3C1Q12789 2109 aa19.39■□□□□ 0.69
CPNE1-219ENST00000440240 A0A088AWK7 358 aa19.38■□□□□ 0.69
CPNE1-219ENST00000440240 NPEPPSL1A6NEC2 478 aa19.38■□□□□ 0.69
CPNE1-219ENST00000440240 E9PLN8 166 aa19.38■□□□□ 0.69
CPNE1-219ENST00000440240 WDR47O94967 919 aa19.38■□□□□ 0.69
CPNE1-219ENST00000440240 ZNF10P21506 573 aaPredicted RBP19.38■□□□□ 0.69
CPNE1-219ENST00000440240 TAS2R39P59534 338 aa19.38■□□□□ 0.69
CPNE1-219ENST00000440240 RNFT1Q5M7Z0 435 aa19.38■□□□□ 0.69
CPNE1-219ENST00000440240 SLCO4C1Q6ZQN7 724 aa19.38■□□□□ 0.69
CPNE1-219ENST00000440240 DOLPP1Q86YN1 238 aa19.38■□□□□ 0.69
CPNE1-219ENST00000440240 ANKMY2Q8IV38 441 aa19.38■□□□□ 0.69
CPNE1-219ENST00000440240 KRT78Q8N1N4 520 aa19.38■□□□□ 0.69
CPNE1-219ENST00000440240 APCDD1LQ8NCL9 501 aa19.38■□□□□ 0.69
CPNE1-219ENST00000440240 AGAP11Q8TF27 550 aa19.38■□□□□ 0.69
CPNE1-219ENST00000440240 PHF10Q8WUB8 498 aaKnown RBP19.38■□□□□ 0.69
CPNE1-219ENST00000440240 VKORC1Q9BQB6 163 aa19.38■□□□□ 0.69
CPNE1-219ENST00000440240 PITHD1Q9GZP4 211 aaPredicted RBP19.38■□□□□ 0.69
CPNE1-219ENST00000440240 POPDC3Q9HBV1 291 aa19.38■□□□□ 0.69
CPNE1-219ENST00000440240 FBN2P35556 2912 aa19.38■□□□□ 0.69
CPNE1-219ENST00000440240 TACC2O95359 2948 aa19.37■□□□□ 0.69
CPNE1-219ENST00000440240 LRIT2A6NDA9 550 aa19.37■□□□□ 0.69
CPNE1-219ENST00000440240 SYNDIG1LA6NDD5 238 aa19.37■□□□□ 0.69
CPNE1-219ENST00000440240 MYO1DO94832 1006 aa19.37■□□□□ 0.69
CPNE1-219ENST00000440240 SLC12A2P55011 1212 aa19.37■□□□□ 0.69
CPNE1-219ENST00000440240 HSD17B7P56937 341 aa19.37■□□□□ 0.69
CPNE1-219ENST00000440240 PDIA2Q13087 525 aaKnown RBP19.37■□□□□ 0.69
CPNE1-219ENST00000440240 TSNQ15631 228 aaKnown RBP19.37■□□□□ 0.69
CPNE1-219ENST00000440240 KLHDC8AQ8IYD2 350 aa19.37■□□□□ 0.69
CPNE1-219ENST00000440240 TMEM156Q8N614 296 aa19.37■□□□□ 0.69
CPNE1-219ENST00000440240 FBXO36Q8NEA4 188 aa19.37■□□□□ 0.69
CPNE1-219ENST00000440240 RHBDF1Q96CC6 855 aa19.37■□□□□ 0.69
CPNE1-219ENST00000440240 NT5DC2Q9H857 520 aa19.37■□□□□ 0.69
CPNE1-219ENST00000440240 PPIEQ9UNP9 301 aaKnown RBP19.37■□□□□ 0.69
CPNE1-219ENST00000440240 MRPS33Q9Y291 106 aaKnown RBP19.37■□□□□ 0.69
CPNE1-219ENST00000440240 NCOA6Q14686 2063 aaPredicted RBP19.36■□□□□ 0.69
CPNE1-219ENST00000440240 TRBV11-1A0A0K0K1C0 115 aa19.36■□□□□ 0.69
CPNE1-219ENST00000440240 ANKDD1BA6NHY2 528 aa19.36■□□□□ 0.69
CPNE1-219ENST00000440240 SEC31AO94979 1220 aaKnown RBP19.36■□□□□ 0.69
CPNE1-219ENST00000440240 GDF5P43026 501 aa19.36■□□□□ 0.69
CPNE1-219ENST00000440240 HSF1Q00613 529 aa19.36■□□□□ 0.69
CPNE1-219ENST00000440240 SLC13A2Q13183 592 aa19.36■□□□□ 0.69
CPNE1-219ENST00000440240 RUNX2Q13950 521 aa19.36■□□□□ 0.69
CPNE1-219ENST00000440240 ZNF460Q14592 562 aa19.36■□□□□ 0.69
CPNE1-219ENST00000440240 SULF2Q8IWU5 870 aa19.36■□□□□ 0.69
CPNE1-219ENST00000440240 CHERPQ8IWX8 916 aaKnown RBP19.36■□□□□ 0.69
CPNE1-219ENST00000440240 SCUBE1Q8IWY4 988 aa19.36■□□□□ 0.69
CPNE1-219ENST00000440240 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.36■□□□□ 0.69
CPNE1-219ENST00000440240 C16orf52Q8NHV5 167 aa19.36■□□□□ 0.69
CPNE1-219ENST00000440240 ANKRD49Q8WVL7 239 aa19.36■□□□□ 0.69
CPNE1-219ENST00000440240 CCT6BQ92526 530 aa19.36■□□□□ 0.69
CPNE1-219ENST00000440240 MS4A6EQ96DS6 147 aa19.36■□□□□ 0.69
CPNE1-219ENST00000440240 VMP1Q96GC9 406 aa19.36■□□□□ 0.69
CPNE1-219ENST00000440240 PDLIM2Q96JY6 352 aa19.36■□□□□ 0.69
CPNE1-219ENST00000440240 CAPZA3Q96KX2 299 aa19.36■□□□□ 0.69
CPNE1-219ENST00000440240 CCDC77Q9BR77 488 aa19.36■□□□□ 0.69
CPNE1-219ENST00000440240 AICDAQ9GZX7 198 aa19.36■□□□□ 0.69
CPNE1-219ENST00000440240 RHOJQ9H4E5 214 aa19.36■□□□□ 0.69
CPNE1-219ENST00000440240 PRTFDC1Q9NRG1 225 aa19.36■□□□□ 0.69
CPNE1-219ENST00000440240 PNO1Q9NRX1 252 aaKnown RBP19.36■□□□□ 0.69
CPNE1-219ENST00000440240 GPRC5BQ9NZH0 403 aa19.36■□□□□ 0.69
CPNE1-219ENST00000440240 FBXW2Q9UKT8 454 aa19.36■□□□□ 0.69
CPNE1-219ENST00000440240 ASB1Q9Y576 335 aa19.36■□□□□ 0.69
CPNE1-219ENST00000440240 PDZD2O15018 2839 aa19.36■□□□□ 0.69
CPNE1-219ENST00000440240 DCHS2Q6V1P9 2916 aa19.35■□□□□ 0.69
CPNE1-219ENST00000440240 POLQO75417 2590 aa19.35■□□□□ 0.69
CPNE1-219ENST00000440240 C4orf51C9J302 202 aa19.35■□□□□ 0.69
CPNE1-219ENST00000440240 TFECO14948 347 aaPredicted RBP19.35■□□□□ 0.69
CPNE1-219ENST00000440240 ERI3O43414 337 aaKnown RBP19.35■□□□□ 0.69
CPNE1-219ENST00000440240 B3GALT2O43825 422 aa19.35■□□□□ 0.69
CPNE1-219ENST00000440240 PEX1O43933 1283 aa19.35■□□□□ 0.69
CPNE1-219ENST00000440240 ITGA10O75578 1167 aa19.35■□□□□ 0.69
CPNE1-219ENST00000440240 CLEC3AO75596 197 aa19.35■□□□□ 0.69
CPNE1-219ENST00000440240 SLC6A12P48065 614 aa19.35■□□□□ 0.69
CPNE1-219ENST00000440240 MEOX1P50221 254 aa19.35■□□□□ 0.69
CPNE1-219ENST00000440240 SLBPQ14493 270 aaKnown RBP eCLIP19.35■□□□□ 0.69
CPNE1-219ENST00000440240 CREG2Q8IUH2 290 aa19.35■□□□□ 0.69
CPNE1-219ENST00000440240 CEP97Q8IW35 865 aa19.35■□□□□ 0.69
CPNE1-219ENST00000440240 ZNF595Q8IYB9 648 aa19.35■□□□□ 0.69
CPNE1-219ENST00000440240 CYP4Z2PQ8N1L4 340 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms