RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 DNAJB6O75190 326 aa18.65■□□□□ 0.58
SHROOM1-204ENST00000440118 RASAL1O95294 804 aa18.65■□□□□ 0.58
SHROOM1-204ENST00000440118 LTA4HP09960 611 aaKnown RBP18.65■□□□□ 0.58
SHROOM1-204ENST00000440118 SLC35E2BP0CK96 405 aa18.65■□□□□ 0.58
SHROOM1-204ENST00000440118 MAOAP21397 527 aa18.65■□□□□ 0.58
SHROOM1-204ENST00000440118 GGT5P36269 586 aa18.65■□□□□ 0.58
SHROOM1-204ENST00000440118 IRF8Q02556 426 aa18.65■□□□□ 0.58
SHROOM1-204ENST00000440118 HYAL2Q12891 473 aa18.65■□□□□ 0.58
SHROOM1-204ENST00000440118 CRLF3Q8IUI8 442 aa18.65■□□□□ 0.58
SHROOM1-204ENST00000440118 CA13Q8N1Q1 262 aa18.65■□□□□ 0.58
SHROOM1-204ENST00000440118 PTCD3Q96EY7 689 aaKnown RBP18.65■□□□□ 0.58
SHROOM1-204ENST00000440118 UBXN10Q96LJ8 280 aa18.65■□□□□ 0.58
SHROOM1-204ENST00000440118 UTP23Q9BRU9 249 aaKnown RBP18.65■□□□□ 0.58
SHROOM1-204ENST00000440118 REXO4Q9GZR2 422 aaKnown RBP18.65■□□□□ 0.58
SHROOM1-204ENST00000440118 PRDM9Q9NQV7 894 aa18.65■□□□□ 0.58
SHROOM1-204ENST00000440118 ERRFI1Q9UJM3 462 aaPredicted RBP18.65■□□□□ 0.58
SHROOM1-204ENST00000440118 MRPS33Q9Y291 106 aaKnown RBP18.65■□□□□ 0.58
SHROOM1-204ENST00000440118 POLEQ07864 2286 aa18.65■□□□□ 0.58
SHROOM1-204ENST00000440118 CLEC3AO75596 197 aa18.64■□□□□ 0.57
SHROOM1-204ENST00000440118 CRYABP02511 175 aaKnown RBP18.64■□□□□ 0.57
SHROOM1-204ENST00000440118 HNRNPH1P31943 449 aaKnown RBP18.64■□□□□ 0.57
SHROOM1-204ENST00000440118 GMPRP36959 345 aa18.64■□□□□ 0.57
SHROOM1-204ENST00000440118 PLA2G16P53816 162 aa18.64■□□□□ 0.57
SHROOM1-204ENST00000440118 SLC26A5P58743 744 aa18.64■□□□□ 0.57
SHROOM1-204ENST00000440118 BTG2P78543 158 aa18.64■□□□□ 0.57
SHROOM1-204ENST00000440118 OC90Q02509 493 aaPredicted RBP18.64■□□□□ 0.57
SHROOM1-204ENST00000440118 LAPTM5Q13571 262 aa18.64■□□□□ 0.57
SHROOM1-204ENST00000440118 BMPR2Q13873 1038 aa18.64■□□□□ 0.57
SHROOM1-204ENST00000440118 MNS1Q8NEH6 495 aa18.64■□□□□ 0.57
SHROOM1-204ENST00000440118 ADAMTS18Q8TE60 1221 aa18.64■□□□□ 0.57
SHROOM1-204ENST00000440118 NT5DC2Q9H857 520 aa18.64■□□□□ 0.57
SHROOM1-204ENST00000440118 ANKRD10Q9NXR5 420 aa18.64■□□□□ 0.57
SHROOM1-204ENST00000440118 OPTCQ9UBM4 332 aa18.64■□□□□ 0.57
SHROOM1-204ENST00000440118 PLEKHB1Q9UF11 243 aaPredicted RBP18.64■□□□□ 0.57
SHROOM1-204ENST00000440118 OSGIN2Q9Y236 505 aa18.64■□□□□ 0.57
SHROOM1-204ENST00000440118 ACOT9Q9Y305 439 aa18.64■□□□□ 0.57
SHROOM1-204ENST00000440118 ANGPTL3Q9Y5C1 460 aa18.64■□□□□ 0.57
SHROOM1-204ENST00000440118 DOPEY1Q5JWR5 2465 aa18.64■□□□□ 0.57
SHROOM1-204ENST00000440118 A0A087X1B8 175 aa18.63■□□□□ 0.57
SHROOM1-204ENST00000440118 LRIT2A6NDA9 550 aa18.63■□□□□ 0.57
SHROOM1-204ENST00000440118 SYCE1LA8MT33 242 aa18.63■□□□□ 0.57
SHROOM1-204ENST00000440118 A8MUA0 341 aa18.63■□□□□ 0.57
SHROOM1-204ENST00000440118 C4orf51C9J302 202 aa18.63■□□□□ 0.57
SHROOM1-204ENST00000440118 UBXN8O00124 270 aa18.63■□□□□ 0.57
SHROOM1-204ENST00000440118 E2F3O00716 465 aa18.63■□□□□ 0.57
SHROOM1-204ENST00000440118 KERAO60938 352 aa18.63■□□□□ 0.57
SHROOM1-204ENST00000440118 C1QAP02745 245 aa18.63■□□□□ 0.57
SHROOM1-204ENST00000440118 PER3P56645 1201 aa18.63■□□□□ 0.57
SHROOM1-204ENST00000440118 SLC13A2Q13183 592 aa18.63■□□□□ 0.57
SHROOM1-204ENST00000440118 CHIT1Q13231 466 aa18.63■□□□□ 0.57
SHROOM1-204ENST00000440118 DOC2AQ14183 400 aa18.63■□□□□ 0.57
SHROOM1-204ENST00000440118 RCN2Q14257 317 aa18.63■□□□□ 0.57
SHROOM1-204ENST00000440118 ZNF766Q5HY98 468 aa18.63■□□□□ 0.57
SHROOM1-204ENST00000440118 MROH9Q5TGP6 573 aa18.63■□□□□ 0.57
SHROOM1-204ENST00000440118 KLC3Q6P597 504 aa18.63■□□□□ 0.57
SHROOM1-204ENST00000440118 CCDC91Q7Z6B0 441 aa18.63■□□□□ 0.57
SHROOM1-204ENST00000440118 OR2L5Q8NG80 312 aa18.63■□□□□ 0.57
SHROOM1-204ENST00000440118 MS4A6EQ96DS6 147 aa18.63■□□□□ 0.57
SHROOM1-204ENST00000440118 SLX1AQ9BQ83 275 aa18.63■□□□□ 0.57
SHROOM1-204ENST00000440118 CD244Q9BZW8 370 aa18.63■□□□□ 0.57
SHROOM1-204ENST00000440118 PTBP2Q9UKA9 531 aaKnown RBP18.63■□□□□ 0.57
SHROOM1-204ENST00000440118 MMACHCQ9Y4U1 282 aa18.63■□□□□ 0.57
SHROOM1-204ENST00000440118 SAGE2PA6NJ88 616 aa18.62■□□□□ 0.57
SHROOM1-204ENST00000440118 GABRR3A8MPY1 467 aa18.62■□□□□ 0.57
SHROOM1-204ENST00000440118 FAM227AF5H4B4 570 aa18.62■□□□□ 0.57
SHROOM1-204ENST00000440118 CLDN4O14493 209 aa18.62■□□□□ 0.57
SHROOM1-204ENST00000440118 RNF224P0DH78 156 aa18.62■□□□□ 0.57
SHROOM1-204ENST00000440118 SMIM10L1P0DMW3 83 aa18.62■□□□□ 0.57
SHROOM1-204ENST00000440118 PCNAP12004 261 aa18.62■□□□□ 0.57
SHROOM1-204ENST00000440118 GFAPP14136 432 aa18.62■□□□□ 0.57
SHROOM1-204ENST00000440118 CD46P15529 392 aa18.62■□□□□ 0.57
SHROOM1-204ENST00000440118 MSH2P43246 934 aa18.62■□□□□ 0.57
SHROOM1-204ENST00000440118 SERPINB8P50452 374 aa18.62■□□□□ 0.57
SHROOM1-204ENST00000440118 OR1C1Q15619 314 aa18.62■□□□□ 0.57
SHROOM1-204ENST00000440118 FAM83EQ2M2I3 478 aa18.62■□□□□ 0.57
SHROOM1-204ENST00000440118 MYLK4Q86YV6 388 aaPredicted RBP18.62■□□□□ 0.57
SHROOM1-204ENST00000440118 HORMAD2Q8N7B1 307 aa18.62■□□□□ 0.57
SHROOM1-204ENST00000440118 FAM47BQ8NA70 645 aa18.62■□□□□ 0.57
SHROOM1-204ENST00000440118 KCTD4Q8WVF5 259 aa18.62■□□□□ 0.57
SHROOM1-204ENST00000440118 NR4A3Q92570 626 aa18.62■□□□□ 0.57
SHROOM1-204ENST00000440118 UBE2E3Q969T4 207 aa18.62■□□□□ 0.57
SHROOM1-204ENST00000440118 SMIM10Q96HG1 83 aa18.62■□□□□ 0.57
SHROOM1-204ENST00000440118 NPLQ9BXD5 320 aaPredicted RBP18.62■□□□□ 0.57
SHROOM1-204ENST00000440118 PRTFDC1Q9NRG1 225 aa18.62■□□□□ 0.57
SHROOM1-204ENST00000440118 IKBKGQ9Y6K9 419 aa18.62■□□□□ 0.57
SHROOM1-204ENST00000440118 TCRBV16S1A1N1A0A5B0 115 aa18.61■□□□□ 0.57
SHROOM1-204ENST00000440118 CERS1P27544 350 aa18.61■□□□□ 0.57
SHROOM1-204ENST00000440118 ST13P50502 369 aaKnown RBP18.61■□□□□ 0.57
SHROOM1-204ENST00000440118 MTTPP55157 894 aa18.61■□□□□ 0.57
SHROOM1-204ENST00000440118 RAB38P57729 211 aa18.61■□□□□ 0.57
SHROOM1-204ENST00000440118 DLG1Q12959 904 aa18.61■□□□□ 0.57
SHROOM1-204ENST00000440118 TUBA3CQ13748 450 aa18.61■□□□□ 0.57
SHROOM1-204ENST00000440118 ADNP2Q6IQ32 1131 aa18.61■□□□□ 0.57
SHROOM1-204ENST00000440118 H3F3CQ6NXT2 135 aa18.61■□□□□ 0.57
SHROOM1-204ENST00000440118 TUBA3EQ6PEY2 450 aa18.61■□□□□ 0.57
SHROOM1-204ENST00000440118 GFRALQ6UXV0 394 aa18.61■□□□□ 0.57
SHROOM1-204ENST00000440118 TAOK1Q7L7X3 1001 aa18.61■□□□□ 0.57
SHROOM1-204ENST00000440118 ISCA2Q86U28 154 aa18.61■□□□□ 0.57
SHROOM1-204ENST00000440118 KIF2BQ8N4N8 673 aa18.61■□□□□ 0.57
SHROOM1-204ENST00000440118 IFT81Q8WYA0 676 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms