RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 ADAMTS18Q8TE60 1221 aa11.16□□□□□ -0.62
HSPG2-206ENST00000439717 TRPC4APQ8TEL6 797 aa11.16□□□□□ -0.62
HSPG2-206ENST00000439717 SLC39A7Q92504 469 aa11.16□□□□□ -0.62
HSPG2-206ENST00000439717 TBC1D20Q96BZ9 403 aa11.16□□□□□ -0.62
HSPG2-206ENST00000439717 PEX11GQ96HA9 241 aa11.16□□□□□ -0.62
HSPG2-206ENST00000439717 QRFPRQ96P65 431 aa11.16□□□□□ -0.62
HSPG2-206ENST00000439717 ZIM3Q96PE6 472 aa11.16□□□□□ -0.62
HSPG2-206ENST00000439717 CDK15Q96Q40 435 aa11.16□□□□□ -0.62
HSPG2-206ENST00000439717 F2RL3Q96RI0 385 aa11.16□□□□□ -0.62
HSPG2-206ENST00000439717 SERINC2Q96SA4 455 aa11.16□□□□□ -0.62
HSPG2-206ENST00000439717 ZNF382Q96SR6 550 aa11.16□□□□□ -0.62
HSPG2-206ENST00000439717 TBCDQ9BTW9 1192 aa11.16□□□□□ -0.62
HSPG2-206ENST00000439717 VN1R1Q9GZP7 353 aa11.16□□□□□ -0.62
HSPG2-206ENST00000439717 COPS7BQ9H9Q2 264 aaPredicted RBP11.16□□□□□ -0.62
HSPG2-206ENST00000439717 PRM3Q9NNZ6 103 aa11.16□□□□□ -0.62
HSPG2-206ENST00000439717 DMRT3Q9NQL9 472 aa11.16□□□□□ -0.62
HSPG2-206ENST00000439717 PRDM7Q9NQW5 492 aa11.16□□□□□ -0.62
HSPG2-206ENST00000439717 TRPS1Q9UHF7 1281 aa11.16□□□□□ -0.62
HSPG2-206ENST00000439717 LOC102723996A0A087X1L8 192 aa11.15□□□□□ -0.62
HSPG2-206ENST00000439717 A0A1W2PQ72 361 aa11.15□□□□□ -0.62
HSPG2-206ENST00000439717 MKRN2OSH3BPM6 223 aa11.15□□□□□ -0.62
HSPG2-206ENST00000439717 H3BQF6 201 aa11.15□□□□□ -0.62
HSPG2-206ENST00000439717 PSMD12O00232 456 aaPredicted RBP11.15□□□□□ -0.62
HSPG2-206ENST00000439717 KLHL41O60662 606 aa11.15□□□□□ -0.62
HSPG2-206ENST00000439717 ALOX12BO75342 701 aa11.15□□□□□ -0.62
HSPG2-206ENST00000439717 CEACAM4O75871 244 aa11.15□□□□□ -0.62
HSPG2-206ENST00000439717 B3GALT4O96024 378 aa11.15□□□□□ -0.62
HSPG2-206ENST00000439717 FHP07954 510 aa11.15□□□□□ -0.62
HSPG2-206ENST00000439717 C8orf89P0DMQ9 161 aa11.15□□□□□ -0.62
HSPG2-206ENST00000439717 RNH1P13489 461 aaKnown RBP11.15□□□□□ -0.62
HSPG2-206ENST00000439717 ACPPP15309 386 aa11.15□□□□□ -0.62
HSPG2-206ENST00000439717 PKNOX1P55347 436 aa11.15□□□□□ -0.62
HSPG2-206ENST00000439717 SOX8P57073 446 aa11.15□□□□□ -0.62
HSPG2-206ENST00000439717 OLR1P78380 273 aa11.15□□□□□ -0.62
HSPG2-206ENST00000439717 LCP2Q13094 533 aa11.15□□□□□ -0.62
HSPG2-206ENST00000439717 IFT88Q13099 833 aa11.15□□□□□ -0.62
HSPG2-206ENST00000439717 CUL3Q13618 768 aa11.15□□□□□ -0.62
HSPG2-206ENST00000439717 DDX39BQ13838 428 aaKnown RBP11.15□□□□□ -0.62
HSPG2-206ENST00000439717 RCN2Q14257 317 aa11.15□□□□□ -0.62
HSPG2-206ENST00000439717 MINDY4Q4G0A6 757 aa11.15□□□□□ -0.62
HSPG2-206ENST00000439717 SOWAHCQ53LP3 525 aaPredicted RBP11.15□□□□□ -0.62
HSPG2-206ENST00000439717 DCAF10Q5QP82 559 aa11.15□□□□□ -0.62
HSPG2-206ENST00000439717 CEP85LQ5SZL2 805 aa11.15□□□□□ -0.62
HSPG2-206ENST00000439717 MFSD4BQ5TF39 518 aa11.15□□□□□ -0.62
HSPG2-206ENST00000439717 LIPMQ5VYY2 423 aa11.15□□□□□ -0.62
HSPG2-206ENST00000439717 FRG2Q64ET8 278 aa11.15□□□□□ -0.62
HSPG2-206ENST00000439717 CPZQ66K79 652 aa11.15□□□□□ -0.62
HSPG2-206ENST00000439717 TTC19Q6DKK2 380 aaPredicted RBP11.15□□□□□ -0.62
HSPG2-206ENST00000439717 LETMD1Q6P1Q0 360 aa11.15□□□□□ -0.62
HSPG2-206ENST00000439717 RPS27LQ71UM5 84 aaKnown RBP11.15□□□□□ -0.62
HSPG2-206ENST00000439717 UBE3DQ7Z6J8 389 aa11.15□□□□□ -0.62
HSPG2-206ENST00000439717 CA13Q8N1Q1 262 aa11.15□□□□□ -0.62
HSPG2-206ENST00000439717 CLEC1AQ8NC01 280 aa11.15□□□□□ -0.62
HSPG2-206ENST00000439717 PLPP5Q8NEB5 264 aa11.15□□□□□ -0.62
HSPG2-206ENST00000439717 OR11G2Q8NGC1 345 aa11.15□□□□□ -0.62
HSPG2-206ENST00000439717 METTL21AQ8WXB1 218 aa11.15□□□□□ -0.62
HSPG2-206ENST00000439717 RGMAQ96B86 450 aa11.15□□□□□ -0.62
HSPG2-206ENST00000439717 BBC3Q96PG8 261 aaPredicted RBP11.15□□□□□ -0.62
HSPG2-206ENST00000439717 FRG2BQ96QU4 278 aa11.15□□□□□ -0.62
HSPG2-206ENST00000439717 MTERF1Q99551 399 aaKnown RBP11.15□□□□□ -0.62
HSPG2-206ENST00000439717 GSTO2Q9H4Y5 243 aa11.15□□□□□ -0.62
HSPG2-206ENST00000439717 ATP13A2Q9NQ11 1180 aa11.15□□□□□ -0.62
HSPG2-206ENST00000439717 RRAGDQ9NQL2 400 aaPredicted RBP11.15□□□□□ -0.62
HSPG2-206ENST00000439717 LANCL2Q9NS86 450 aa11.15□□□□□ -0.62
HSPG2-206ENST00000439717 OXSMQ9NWU1 459 aa11.15□□□□□ -0.62
HSPG2-206ENST00000439717 C19orf25Q9UFG5 118 aaPredicted RBP11.15□□□□□ -0.62
HSPG2-206ENST00000439717 FBXL4Q9UKA2 621 aa11.15□□□□□ -0.62
HSPG2-206ENST00000439717 G3BP2Q9UN86 482 aaKnown RBP11.15□□□□□ -0.62
HSPG2-206ENST00000439717 SNX6Q9UNH7 406 aa11.15□□□□□ -0.62
HSPG2-206ENST00000439717 ATMQ13315 3056 aa11.15□□□□□ -0.62
HSPG2-206ENST00000439717 CHD6Q8TD26 2715 aa11.14□□□□□ -0.63
HSPG2-206ENST00000439717 A0A0G2JN53 185 aa11.14□□□□□ -0.63
HSPG2-206ENST00000439717 MAGEB17A8MXT2 336 aa11.14□□□□□ -0.63
HSPG2-206ENST00000439717 DNAJB6O75190 326 aa11.14□□□□□ -0.63
HSPG2-206ENST00000439717 JRKO75564 520 aa11.14□□□□□ -0.63
HSPG2-206ENST00000439717 SEMA3DO95025 777 aa11.14□□□□□ -0.63
HSPG2-206ENST00000439717 SCELO95171 688 aa11.14□□□□□ -0.63
HSPG2-206ENST00000439717 HPP00738 406 aa11.14□□□□□ -0.63
HSPG2-206ENST00000439717 TSPAN8P19075 237 aa11.14□□□□□ -0.63
HSPG2-206ENST00000439717 CCL11P51671 97 aa11.14□□□□□ -0.63
HSPG2-206ENST00000439717 NEK2P51955 445 aa11.14□□□□□ -0.63
HSPG2-206ENST00000439717 RAP1GDS1P52306 607 aa11.14□□□□□ -0.63
HSPG2-206ENST00000439717 NAGLUP54802 743 aa11.14□□□□□ -0.63
HSPG2-206ENST00000439717 RAB38P57729 211 aa11.14□□□□□ -0.63
HSPG2-206ENST00000439717 RPS13P62277 151 aaKnown RBP11.14□□□□□ -0.63
HSPG2-206ENST00000439717 RHAGQ02094 409 aa11.14□□□□□ -0.63
HSPG2-206ENST00000439717 ASPHQ12797 758 aa11.14□□□□□ -0.63
HSPG2-206ENST00000439717 AIMP2Q13155 320 aaKnown RBP11.14□□□□□ -0.63
HSPG2-206ENST00000439717 RUNX2Q13950 521 aa11.14□□□□□ -0.63
HSPG2-206ENST00000439717 LY6DQ14210 128 aa11.14□□□□□ -0.63
HSPG2-206ENST00000439717 AP5B1Q2VPB7 878 aa11.14□□□□□ -0.63
HSPG2-206ENST00000439717 TNFAIP8L3Q5GJ75 292 aa11.14□□□□□ -0.63
HSPG2-206ENST00000439717 CFAP157Q5JU67 520 aa11.14□□□□□ -0.63
HSPG2-206ENST00000439717 GPRIN3Q6ZVF9 776 aa11.14□□□□□ -0.63
HSPG2-206ENST00000439717 NDUFAF7Q7L592 441 aa11.14□□□□□ -0.63
HSPG2-206ENST00000439717 ARMC2Q8NEN0 867 aa11.14□□□□□ -0.63
HSPG2-206ENST00000439717 TCP10LQ8TDR4 215 aa11.14□□□□□ -0.63
HSPG2-206ENST00000439717 PGM2Q96G03 612 aa11.14□□□□□ -0.63
HSPG2-206ENST00000439717 SERPINI1Q99574 410 aa11.14□□□□□ -0.63
HSPG2-206ENST00000439717 TRIM55Q9BYV6 548 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms