RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 MRPL28Q13084 256 aaKnown RBP9.56□□□□□ -0.88
CDC42SE1-202ENST00000439374 HNRNPA0Q13151 305 aaKnown RBP9.56□□□□□ -0.88
CDC42SE1-202ENST00000439374 CCSMST1Q4G0I0 132 aa9.56□□□□□ -0.88
CDC42SE1-202ENST00000439374 GAREM2Q75VX8 874 aa9.56□□□□□ -0.88
CDC42SE1-202ENST00000439374 KBTBD8Q8NFY9 601 aa9.56□□□□□ -0.88
CDC42SE1-202ENST00000439374 ZNF296Q8WUU4 475 aaPredicted RBP9.56□□□□□ -0.88
CDC42SE1-202ENST00000439374 KAT2AQ92830 837 aa9.56□□□□□ -0.88
CDC42SE1-202ENST00000439374 MGLLQ99685 303 aa9.56□□□□□ -0.88
CDC42SE1-202ENST00000439374 NIPSNAP1Q9BPW8 284 aa9.56□□□□□ -0.88
CDC42SE1-202ENST00000439374 YTHDF1Q9BYJ9 559 aaKnown RBP9.56□□□□□ -0.88
CDC42SE1-202ENST00000439374 ZC4H2Q9NQZ6 224 aa9.56□□□□□ -0.88
CDC42SE1-202ENST00000439374 SPG21Q9NZD8 308 aa9.56□□□□□ -0.88
CDC42SE1-202ENST00000439374 IL20RAQ9UHF4 553 aa9.56□□□□□ -0.88
CDC42SE1-202ENST00000439374 PLAGL1Q9UM63 463 aa9.56□□□□□ -0.88
CDC42SE1-202ENST00000439374 LOC102723532A0A0G2JNH3 316 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 TMEM202A6NGA9 273 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 FAM25AB3EWG3 89 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 FAM25CB3EWG5 89 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 FAM25GB3EWG6 89 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 TMEM189-UBE2V1I3L0A0 370 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 SLC28A1O00337 649 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 EPN2O95208 641 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 SYPP08247 313 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 GSTM1P09488 218 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 JUNBP17275 347 aaPredicted RBP9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 ACRV1P26436 265 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 ATP6V1E1P36543 226 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 ATP4BP51164 291 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 RAB15P59190 212 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 AP1S1P61966 158 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 GALK2Q01415 458 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 ACVR1Q04771 509 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 PCBP2Q15366 365 aaKnown RBP eCLIP9.55□□□□□ -0.887e-7■■■■■ 29.1
CDC42SE1-202ENST00000439374 C5orf22Q49AR2 442 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 LHX8Q68G74 356 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 CFAP206Q8IYR0 622 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 GRPEL2Q8TAA5 225 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 ACPTQ9BZG2 426 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 FAM83DQ9H4H8 585 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 TBC1D17Q9HA65 648 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 SGK2Q9HBY8 427 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 NECTIN3Q9NQS3 549 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 FBXL12Q9NXK8 326 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 KCTD5Q9NXV2 234 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 PDCD11Q14690 1871 aaKnown RBP9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 FAM240BA0A1B0GVZ2 78 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 FABP12A6NFH5 140 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 METTL15A6NJ78 407 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 M0R082 166 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 ERVH48-1M5A8F1 160 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 HAT1O14929 419 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 TSPAN9O75954 239 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 HLA-FP30511 346 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 NSG1P42857 185 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 ZFP36L2P47974 494 aaKnown RBP9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 LRRC32Q14392 662 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 GPNMBQ14956 572 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 POU4F3Q15319 338 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 LY6G5CQ5SRR4 150 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 PLET1Q6UQ28 207 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 PHC2Q8IXK0 858 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 LGI4Q8N135 537 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 PAPD5Q8NDF8 572 aaKnown RBP9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 GANCQ8TET4 914 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 P2RY13Q9BPV8 354 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 SPATA2Q9UM82 520 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 CACNA1IQ9P0X4 2223 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 ISPDA4D126 451 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 LEFTY2O00292 366 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 ADAMDEC1O15204 470 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 CH25HO95992 272 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 CYP2A7P20853 494 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 RPL6Q02878 288 aaKnown RBP9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 ELP6Q0PNE2 266 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 CSTF3Q12996 717 aaKnown RBP9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 IL18Q14116 193 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 ARTNQ5T4W7 220 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 SLC8B1Q6J4K2 584 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 PTRH1Q86Y79 214 aaKnown RBP9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 SVOPLQ8N434 492 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 C1orf52Q8N6N3 182 aaKnown RBP9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 DCAF4L2Q8NA75 395 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 BEST4Q8NFU0 473 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 OR10G2Q8NGC3 310 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 GGHQ92820 318 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 TXNDC15Q96J42 360 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 HDHD5Q9BXW7 423 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 POLR2J2Q9GZM3 115 aaKnown RBP9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 TRIM45Q9H8W5 580 aaPredicted RBP9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 POPDC3Q9HBV1 291 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 CPNE5Q9HCH3 593 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 SLAMF7Q9NQ25 335 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 ASAH2Q9NR71 780 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 DCAF13Q9NV06 445 aaKnown RBP9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 STMN3Q9NZ72 180 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 ATP6V1HQ9UI12 483 aa9.55□□□□□ -0.88
CDC42SE1-202ENST00000439374 LRRC37A2A6NM11 1700 aa9.54□□□□□ -0.88
CDC42SE1-202ENST00000439374 H3BUI4 141 aa9.54□□□□□ -0.88
CDC42SE1-202ENST00000439374 TGM5O43548 720 aa9.54□□□□□ -0.88
CDC42SE1-202ENST00000439374 NME6O75414 186 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms