RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 SOX6P35712 828 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 DHPSP49366 369 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 COPZ1P61923 177 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 CDK3Q00526 305 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 CDK6Q00534 326 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 DAG1Q14118 895 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 MED22Q15528 200 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 ARMCX4Q5H9R4 360 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 COQ5Q5HYK3 327 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 PNCKQ6P2M8 343 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 DEPDC4Q8N2C3 294 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 SVOPLQ8N434 492 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 OXR1Q8N573 874 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 ZNF597Q96LX8 424 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 COL21A1Q96P44 957 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 CTPS2Q9NRF8 586 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 A0A096LPI6 279 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 FEZF1A0PJY2 475 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 OR52A4PA6NMU1 304 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 CFIP05156 583 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 CAPGP40121 348 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 TAS2R41P59536 307 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 DSTNP60981 165 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 SRP54P61011 504 aaKnown RBP11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 YBX1P67809 324 aaKnown RBP11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 DUSP6Q16828 381 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 CEACAM20Q6UY09 585 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 NEK10Q6ZWH5 1172 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 LMNTD1Q8N9Z9 388 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 FAM3CQ92520 227 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 P2RY12Q9H244 342 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 SPATA6Q9NWH7 488 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 SPATA2Q9UM82 520 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 OTOFQ9HC10 1997 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 EFCAB10A6NFE3 127 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 CLDN4O14493 209 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 OLFM2O95897 454 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 IL3P08700 152 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 HTR1EP28566 365 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 CTSKP43235 329 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 RAB28P51157 221 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 HK3P52790 923 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 CLDN2P57739 230 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 RPA4Q13156 261 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 RCAN2Q14206 197 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 GTDC1Q4AE62 458 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 FBXO43Q4G163 708 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 TMEM150AQ86TG1 271 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 SAMD14Q8IZD0 417 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 LILRA3Q8N6C8 439 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 ZNF480Q8WV37 535 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 ACPTQ9BZG2 426 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 NAA50Q9GZZ1 169 aaKnown RBP11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 STOML2Q9UJZ1 356 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 FZD6O60353 706 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 C8orf89P0DMQ9 161 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 DRD1P21728 446 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 CD9P21926 228 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 CENPAP49450 140 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 RGS8P57771 180 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 SUZ12Q15022 739 aaKnown RBP11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 AMZ1Q400G9 498 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 SPATS1Q496A3 300 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 ZNF57Q68EA5 555 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 VRK3Q8IV63 474 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 CAMKK1Q8N5S9 505 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 CAMKVQ8NCB2 501 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 OR5K1Q8NHB7 308 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 TADA1Q96BN2 335 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 ISOC1Q96CN7 298 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 MVB12BQ9H7P6 319 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 IDH3BO43837 385 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 LAMP2P13473 410 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 FMO3P31513 532 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 MXD1Q05195 221 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 NCF4Q15080 339 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 PUS10Q3MIT2 529 aaKnown RBP11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 ASTLQ6HA08 431 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 GRHL2Q6ISB3 625 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 KLHL17Q6TDP4 642 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 COMMD6Q7Z4G1 85 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 ARMC8Q8IUR7 673 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 CLIP4Q8N3C7 705 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 SMYD1Q8NB12 490 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 RPLP0P6Q8NHW5 317 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 EGLN2Q96KS0 407 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 TPSD1Q9BZJ3 242 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 CCM2LQ9NUG4 571 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 HRASLS2Q9NWW9 162 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 CMTM6Q9NX76 183 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 LYVE1Q9Y5Y7 322 aa11.11□□□□□ -0.63
TRAPPC9-202ENST00000438773 UGT2B11O75310 529 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 ATE1O95260 518 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 ASGR2P07307 311 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 ALPPL2P10696 532 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 HSD17B1P14061 328 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 CD247P20963 164 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 PAICSP22234 425 aaKnown RBP11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 FEN1P39748 380 aaKnown RBP11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 ALDH3B2P48448 385 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms