RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 ATP1A4Q13733 1029 aa14.68□□□□□ -0.06
TREX1-201ENST00000433541 E2F2Q14209 437 aa14.68□□□□□ -0.06
TREX1-201ENST00000433541 CRTC2Q53ET0 693 aaPredicted RBP14.68□□□□□ -0.06
TREX1-201ENST00000433541 TMEM35AQ53FP2 167 aa14.68□□□□□ -0.06
TREX1-201ENST00000433541 KHDRBS2Q5VWX1 349 aaKnown RBP14.68□□□□□ -0.06
TREX1-201ENST00000433541 FRG2Q64ET8 278 aa14.68□□□□□ -0.06
TREX1-201ENST00000433541 LETMD1Q6P1Q0 360 aa14.68□□□□□ -0.06
TREX1-201ENST00000433541 HDXQ7Z353 690 aa14.68□□□□□ -0.06
TREX1-201ENST00000433541 MRGPREQ86SM8 312 aa14.68□□□□□ -0.06
TREX1-201ENST00000433541 EXOC3L1Q86VI1 746 aa14.68□□□□□ -0.06
TREX1-201ENST00000433541 AFAP1L2Q8N4X5 818 aa14.68□□□□□ -0.06
TREX1-201ENST00000433541 METTL6Q8TCB7 284 aa14.68□□□□□ -0.06
TREX1-201ENST00000433541 SNRNP27Q8WVK2 155 aaKnown RBP14.68□□□□□ -0.06
TREX1-201ENST00000433541 APOBEC4Q8WW27 367 aaKnown RBP14.68□□□□□ -0.06
TREX1-201ENST00000433541 SELENOMQ8WWX9 145 aa14.68□□□□□ -0.06
TREX1-201ENST00000433541 METTL21AQ8WXB1 218 aa14.68□□□□□ -0.06
TREX1-201ENST00000433541 RGMAQ96B86 450 aa14.68□□□□□ -0.06
TREX1-201ENST00000433541 IP6K3Q96PC2 410 aa14.68□□□□□ -0.06
TREX1-201ENST00000433541 FRG2BQ96QU4 278 aa14.68□□□□□ -0.06
TREX1-201ENST00000433541 ZNF382Q96SR6 550 aa14.68□□□□□ -0.06
TREX1-201ENST00000433541 SPSB2Q99619 263 aa14.68□□□□□ -0.06
TREX1-201ENST00000433541 PAIP2Q9BPZ3 127 aaKnown RBP14.68□□□□□ -0.06
TREX1-201ENST00000433541 MECRQ9BV79 373 aa14.68□□□□□ -0.06
TREX1-201ENST00000433541 SHCBP1LQ9BZQ2 653 aa14.68□□□□□ -0.06
TREX1-201ENST00000433541 GSTO2Q9H4Y5 243 aa14.68□□□□□ -0.06
TREX1-201ENST00000433541 SEMA3GQ9NS98 782 aa14.68□□□□□ -0.06
TREX1-201ENST00000433541 TRPS1Q9UHF7 1281 aa14.68□□□□□ -0.06
TREX1-201ENST00000433541 NBEAQ8NFP9 2946 aa14.67□□□□□ -0.06
TREX1-201ENST00000433541 VSTM2BA6NLU5 285 aa14.67□□□□□ -0.06
TREX1-201ENST00000433541 C4orf51C9J302 202 aa14.67□□□□□ -0.06
TREX1-201ENST00000433541 B4GALT2O60909 372 aa14.67□□□□□ -0.06
TREX1-201ENST00000433541 JRKO75564 520 aa14.67□□□□□ -0.06
TREX1-201ENST00000433541 RECKO95980 971 aa14.67□□□□□ -0.06
TREX1-201ENST00000433541 ITGB2P05107 769 aa14.67□□□□□ -0.06
TREX1-201ENST00000433541 UMODP07911 640 aa14.67□□□□□ -0.06
TREX1-201ENST00000433541 JAK1P23458 1154 aa14.67□□□□□ -0.06
TREX1-201ENST00000433541 PTX3P26022 381 aaPredicted RBP14.67□□□□□ -0.06
TREX1-201ENST00000433541 CERS1P27544 350 aa14.67□□□□□ -0.06
TREX1-201ENST00000433541 ALDH3A1P30838 453 aa14.67□□□□□ -0.06
TREX1-201ENST00000433541 RRADP55042 308 aa14.67□□□□□ -0.06
TREX1-201ENST00000433541 MTTPP55157 894 aa14.67□□□□□ -0.06
TREX1-201ENST00000433541 DNAJB13P59910 316 aa14.67□□□□□ -0.06
TREX1-201ENST00000433541 CHAF1BQ13112 559 aa14.67□□□□□ -0.06
TREX1-201ENST00000433541 TBR1Q16650 682 aa14.67□□□□□ -0.06
TREX1-201ENST00000433541 GGTA1PQ4G0N0 100 aa14.67□□□□□ -0.06
TREX1-201ENST00000433541 FRMD7Q6ZUT3 714 aa14.67□□□□□ -0.06
TREX1-201ENST00000433541 ZC3H7AQ8IWR0 971 aaKnown RBP14.67□□□□□ -0.06
TREX1-201ENST00000433541 ANKRD42Q8N9B4 389 aa14.67□□□□□ -0.06
TREX1-201ENST00000433541 SERINC2Q96SA4 455 aa14.67□□□□□ -0.06
TREX1-201ENST00000433541 SERPINI1Q99574 410 aa14.67□□□□□ -0.06
TREX1-201ENST00000433541 SLC12A4Q9UP95 1085 aa14.67□□□□□ -0.06
TREX1-201ENST00000433541 SPACA6W5XKT8 324 aa14.67□□□□□ -0.06
TREX1-201ENST00000433541 IGLV3-12A0A075B6K2 115 aa14.66□□□□□ -0.06
TREX1-201ENST00000433541 A0A1B0GTL3 188 aa14.66□□□□□ -0.06
TREX1-201ENST00000433541 WDR91A4D1P6 747 aa14.66□□□□□ -0.06
TREX1-201ENST00000433541 RTCAO00442 366 aaKnown RBP14.66□□□□□ -0.06
TREX1-201ENST00000433541 TYROBPO43914 113 aa14.66□□□□□ -0.06
TREX1-201ENST00000433541 BMP10O95393 424 aa14.66□□□□□ -0.06
TREX1-201ENST00000433541 ENO1P06733 434 aaKnown RBP14.66□□□□□ -0.06
TREX1-201ENST00000433541 UQCRHP07919 91 aa14.66□□□□□ -0.06
TREX1-201ENST00000433541 ACPPP15309 386 aa14.66□□□□□ -0.06
TREX1-201ENST00000433541 MMP11P24347 488 aa14.66□□□□□ -0.06
TREX1-201ENST00000433541 RCN2Q14257 317 aa14.66□□□□□ -0.06
TREX1-201ENST00000433541 ADPRMQ3LIE5 342 aa14.66□□□□□ -0.06
TREX1-201ENST00000433541 C10orf62Q5T681 223 aaPredicted RBP14.66□□□□□ -0.06
TREX1-201ENST00000433541 DEPDC1Q5TB30 811 aa14.66□□□□□ -0.06
TREX1-201ENST00000433541 ABHD17CQ6PCB6 329 aa14.66□□□□□ -0.06
TREX1-201ENST00000433541 LAPTM4BQ86VI4 370 aa14.66□□□□□ -0.06
TREX1-201ENST00000433541 TMEM151BQ8IW70 566 aa14.66□□□□□ -0.06
TREX1-201ENST00000433541 EFCAB3Q8N7B9 438 aa14.66□□□□□ -0.06
TREX1-201ENST00000433541 FAM47BQ8NA70 645 aa14.66□□□□□ -0.06
TREX1-201ENST00000433541 CLEC1AQ8NC01 280 aa14.66□□□□□ -0.06
TREX1-201ENST00000433541 WDR20Q8TBZ3 569 aa14.66□□□□□ -0.06
TREX1-201ENST00000433541 TBC1D20Q96BZ9 403 aa14.66□□□□□ -0.06
TREX1-201ENST00000433541 FER1L6-AS2Q96M78 137 aa14.66□□□□□ -0.06
TREX1-201ENST00000433541 OR1F2PQ96R84 312 aa14.66□□□□□ -0.06
TREX1-201ENST00000433541 HBEGFQ99075 208 aa14.66□□□□□ -0.06
TREX1-201ENST00000433541 TBCDQ9BTW9 1192 aa14.66□□□□□ -0.06
TREX1-201ENST00000433541 SLC29A3Q9BZD2 475 aa14.66□□□□□ -0.06
TREX1-201ENST00000433541 TGIF2Q9GZN2 237 aa14.66□□□□□ -0.06
TREX1-201ENST00000433541 AICDAQ9GZX7 198 aa14.66□□□□□ -0.06
TREX1-201ENST00000433541 SSU72Q9NP77 194 aaKnown RBP14.66□□□□□ -0.06
TREX1-201ENST00000433541 P4HTMQ9NXG6 502 aa14.66□□□□□ -0.06
TREX1-201ENST00000433541 G3BP2Q9UN86 482 aaKnown RBP14.66□□□□□ -0.06
TREX1-201ENST00000433541 MRPS33Q9Y291 106 aaKnown RBP14.66□□□□□ -0.06
TREX1-201ENST00000433541 FIS1Q9Y3D6 152 aa14.66□□□□□ -0.06
TREX1-201ENST00000433541 ACTL7BQ9Y614 415 aa14.66□□□□□ -0.06
TREX1-201ENST00000433541 ARHGAP10A1A4S6 786 aa14.65□□□□□ -0.06
TREX1-201ENST00000433541 ERVH48-1M5A8F1 160 aa14.65□□□□□ -0.06
TREX1-201ENST00000433541 FOXE1O00358 373 aaPredicted RBP14.65□□□□□ -0.06
TREX1-201ENST00000433541 TM9SF1O15321 606 aa14.65□□□□□ -0.06
TREX1-201ENST00000433541 ULK1O75385 1050 aa14.65□□□□□ -0.06
TREX1-201ENST00000433541 ZWINTO95229 277 aa14.65□□□□□ -0.06
TREX1-201ENST00000433541 ESRRBO95718 433 aa14.65□□□□□ -0.06
TREX1-201ENST00000433541 PDYNP01213 254 aa14.65□□□□□ -0.06
TREX1-201ENST00000433541 FHP07954 510 aa14.65□□□□□ -0.06
TREX1-201ENST00000433541 C8orf89P0DMQ9 161 aa14.65□□□□□ -0.06
TREX1-201ENST00000433541 SMIM10L1P0DMW3 83 aa14.65□□□□□ -0.06
TREX1-201ENST00000433541 IL10P22301 178 aa14.65□□□□□ -0.06
TREX1-201ENST00000433541 MAGOHP61326 146 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms