RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 A0A0G2JN53 185 aa10.07□□□□□ -0.8
NEFM-202ENST00000433454 RNASET2O00584 256 aaKnown RBP10.07□□□□□ -0.8
NEFM-202ENST00000433454 SCN2BO60939 215 aa10.07□□□□□ -0.8
NEFM-202ENST00000433454 DDX5P17844 614 aaKnown RBP10.07□□□□□ -0.8
NEFM-202ENST00000433454 DDCP20711 480 aa10.07□□□□□ -0.8
NEFM-202ENST00000433454 CDH3P22223 829 aa10.07□□□□□ -0.8
NEFM-202ENST00000433454 HIST1H1TP22492 207 aaPredicted RBP10.07□□□□□ -0.8
NEFM-202ENST00000433454 CNR2P34972 360 aa10.07□□□□□ -0.8
NEFM-202ENST00000433454 PPM1FP49593 454 aaPredicted RBP10.07□□□□□ -0.8
NEFM-202ENST00000433454 GSK3BP49841 420 aa10.07□□□□□ -0.8
NEFM-202ENST00000433454 EPHA4P54764 986 aa10.07□□□□□ -0.8
NEFM-202ENST00000433454 TRA2BP62995 288 aaKnown RBP10.07□□□□□ -0.8
NEFM-202ENST00000433454 AP2B1P63010 937 aa10.07□□□□□ -0.8
NEFM-202ENST00000433454 MC1RQ01726 317 aa10.07□□□□□ -0.8
NEFM-202ENST00000433454 IRGCQ6NXR0 463 aa10.07□□□□□ -0.8
NEFM-202ENST00000433454 AAGABQ6PD74 315 aa10.07□□□□□ -0.8
NEFM-202ENST00000433454 PACS2Q86VP3 889 aa10.07□□□□□ -0.8
NEFM-202ENST00000433454 MSRB3Q8IXL7 192 aa10.07□□□□□ -0.8
NEFM-202ENST00000433454 SLC25A45Q8N413 288 aa10.07□□□□□ -0.8
NEFM-202ENST00000433454 GAL3ST3Q96A11 431 aa10.07□□□□□ -0.8
NEFM-202ENST00000433454 ZC3H10Q96K80 434 aaKnown RBP10.07□□□□□ -0.8
NEFM-202ENST00000433454 CCDC115Q96NT0 180 aa10.07□□□□□ -0.8
NEFM-202ENST00000433454 THUMPD3Q9BV44 507 aaKnown RBP10.07□□□□□ -0.8
NEFM-202ENST00000433454 PCDHAC1Q9H158 963 aa10.07□□□□□ -0.8
NEFM-202ENST00000433454 ABCG4Q9H172 646 aa10.07□□□□□ -0.8
NEFM-202ENST00000433454 BTNL2Q9UIR0 455 aa10.07□□□□□ -0.8
NEFM-202ENST00000433454 AP3M1Q9Y2T2 418 aa10.07□□□□□ -0.8
NEFM-202ENST00000433454 C4orf51C9J302 202 aa10.06□□□□□ -0.8
NEFM-202ENST00000433454 NVLO15381 856 aaKnown RBP10.06□□□□□ -0.8
NEFM-202ENST00000433454 TMPRSS11DO60235 418 aa10.06□□□□□ -0.8
NEFM-202ENST00000433454 EPHA8P29322 1005 aaPredicted RBP10.06□□□□□ -0.8
NEFM-202ENST00000433454 PTPN6P29350 595 aa10.06□□□□□ -0.8
NEFM-202ENST00000433454 HOXD12P35452 270 aa10.06□□□□□ -0.8
NEFM-202ENST00000433454 CDKN2CP42773 168 aa10.06□□□□□ -0.8
NEFM-202ENST00000433454 ATXN3P54252 364 aaPredicted RBP10.06□□□□□ -0.8
NEFM-202ENST00000433454 BNIP3Q12983 259 aa10.06□□□□□ -0.8
NEFM-202ENST00000433454 SLC9A5Q14940 896 aa10.06□□□□□ -0.8
NEFM-202ENST00000433454 GTDC1Q4AE62 458 aa10.06□□□□□ -0.8
NEFM-202ENST00000433454 ZNF385BQ569K4 471 aa10.06□□□□□ -0.8
NEFM-202ENST00000433454 PEAR1Q5VY43 1037 aaPredicted RBP10.06□□□□□ -0.8
NEFM-202ENST00000433454 ZNF793Q6ZN11 406 aa10.06□□□□□ -0.8
NEFM-202ENST00000433454 IFNEQ86WN2 208 aa10.06□□□□□ -0.8
NEFM-202ENST00000433454 TICAM1Q8IUC6 712 aa10.06□□□□□ -0.8
NEFM-202ENST00000433454 ZNF655Q8N720 491 aaPredicted RBP10.06□□□□□ -0.8
NEFM-202ENST00000433454 CAMKVQ8NCB2 501 aa10.06□□□□□ -0.8
NEFM-202ENST00000433454 MIEF2Q96C03 454 aa10.06□□□□□ -0.8
NEFM-202ENST00000433454 TM4SF18Q96CE8 201 aa10.06□□□□□ -0.8
NEFM-202ENST00000433454 ECSITQ9BQ95 431 aa10.06□□□□□ -0.8
NEFM-202ENST00000433454 TRIM15Q9C019 465 aa10.06□□□□□ -0.8
NEFM-202ENST00000433454 MUC13Q9H3R2 512 aa10.06□□□□□ -0.8
NEFM-202ENST00000433454 COPS7BQ9H9Q2 264 aaPredicted RBP10.06□□□□□ -0.8
NEFM-202ENST00000433454 SLC6A13Q9NSD5 602 aa10.06□□□□□ -0.8
NEFM-202ENST00000433454 GMPR2Q9P2T1 348 aaKnown RBP10.06□□□□□ -0.8
NEFM-202ENST00000433454 URADA6NGE7 173 aa10.06□□□□□ -0.8
NEFM-202ENST00000433454 NUDT21O43809 227 aaKnown RBP10.06□□□□□ -0.8
NEFM-202ENST00000433454 GPR37L1O60883 481 aa10.06□□□□□ -0.8
NEFM-202ENST00000433454 GUCY1B2O75343 617 aa10.06□□□□□ -0.8
NEFM-202ENST00000433454 CFIP05156 583 aa10.06□□□□□ -0.8
NEFM-202ENST00000433454 GSNP06396 782 aa10.06□□□□□ -0.8
NEFM-202ENST00000433454 HOXB9P17482 250 aaPredicted RBP10.06□□□□□ -0.8
NEFM-202ENST00000433454 ATP5A1P25705 553 aaKnown RBP10.06□□□□□ -0.8
NEFM-202ENST00000433454 RAB8AP61006 207 aa10.06□□□□□ -0.8
NEFM-202ENST00000433454 SELPLGQ14242 412 aa10.06□□□□□ -0.8
NEFM-202ENST00000433454 SHBQ15464 509 aa10.06□□□□□ -0.8
NEFM-202ENST00000433454 RUNDC3AQ59EK9 446 aa10.06□□□□□ -0.8
NEFM-202ENST00000433454 RABEPKQ7Z6M1 372 aa10.06□□□□□ -0.8
NEFM-202ENST00000433454 DHFR2Q86XF0 187 aa10.06□□□□□ -0.8
NEFM-202ENST00000433454 CLECL1Q8IZS7 167 aa10.06□□□□□ -0.8
NEFM-202ENST00000433454 ZCCHC7Q8N3Z6 543 aaKnown RBP10.06□□□□□ -0.8
NEFM-202ENST00000433454 ACOT4Q8N9L9 421 aa10.06□□□□□ -0.8
NEFM-202ENST00000433454 C19orf47Q8N9M1 422 aaKnown RBP10.06□□□□□ -0.8
NEFM-202ENST00000433454 KCT2Q8NC54 265 aa10.06□□□□□ -0.8
NEFM-202ENST00000433454 OR8K5Q8NH50 307 aa10.06□□□□□ -0.8
NEFM-202ENST00000433454 PYDC1Q8WXC3 89 aa10.06□□□□□ -0.8
NEFM-202ENST00000433454 TM4SF19Q96DZ7 209 aa10.06□□□□□ -0.8
NEFM-202ENST00000433454 FAIM2Q9BWQ8 316 aa10.06□□□□□ -0.8
NEFM-202ENST00000433454 S100A14Q9HCY8 104 aa10.06□□□□□ -0.8
NEFM-202ENST00000433454 PRDM7Q9NQW5 492 aa10.06□□□□□ -0.8
NEFM-202ENST00000433454 LRIT1Q9P2V4 623 aa10.06□□□□□ -0.8
NEFM-202ENST00000433454 STX18Q9P2W9 335 aaKnown RBP10.06□□□□□ -0.8
NEFM-202ENST00000433454 NKX1-2Q9UD57 310 aaPredicted RBP10.06□□□□□ -0.8
NEFM-202ENST00000433454 RNF215Q9Y6U7 377 aa10.06□□□□□ -0.8
NEFM-202ENST00000433454 ZSCAN9O15535 394 aaPredicted RBP10.05□□□□□ -0.8
NEFM-202ENST00000433454 EPN2O95208 641 aa10.05□□□□□ -0.8
NEFM-202ENST00000433454 CPSF4O95639 269 aaKnown RBP10.05□□□□□ -0.8
NEFM-202ENST00000433454 FAM58BPP0C7Q3 252 aa10.05□□□□□ -0.8
NEFM-202ENST00000433454 ST6GAL1P15907 406 aa10.05□□□□□ -0.8
NEFM-202ENST00000433454 ALDH9A1P49189 494 aa10.05□□□□□ -0.8
NEFM-202ENST00000433454 MUM1Q2TAK8 710 aa10.05□□□□□ -0.8
NEFM-202ENST00000433454 FRMPD2BQ6IN97 320 aa10.05□□□□□ -0.8
NEFM-202ENST00000433454 SPATA24Q86W54 205 aa10.05□□□□□ -0.8
NEFM-202ENST00000433454 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.05□□□□□ -0.8
NEFM-202ENST00000433454 SLC35F3Q8IY50 421 aa10.05□□□□□ -0.8
NEFM-202ENST00000433454 MMP21Q8N119 569 aa10.05□□□□□ -0.8
NEFM-202ENST00000433454 ZNF764Q96H86 408 aaPredicted RBP10.05□□□□□ -0.8
NEFM-202ENST00000433454 RSRC1Q96IZ7 334 aaKnown RBP10.05□□□□□ -0.8
NEFM-202ENST00000433454 LRGUKQ96M69 825 aa10.05□□□□□ -0.8
NEFM-202ENST00000433454 TRAPPC9Q96Q05 1148 aa10.05□□□□□ -0.8
NEFM-202ENST00000433454 CCDC3Q9BQI4 270 aa10.05□□□□□ -0.8
NEFM-202ENST00000433454 CPPED1Q9BRF8 314 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms