RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 XKR6Q5GH73 641 aa11.74□□□□□ -0.53
SMPD4-204ENST00000430682 CDKL4Q5MAI5 379 aa11.74□□□□□ -0.53
SMPD4-204ENST00000430682 ACER2Q5QJU3 275 aa11.74□□□□□ -0.53
SMPD4-204ENST00000430682 ZNF468Q5VIY5 522 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-204ENST00000430682 RPUSD3Q6P087 351 aaKnown RBP11.74□□□□□ -0.53
SMPD4-204ENST00000430682 RAPH1Q70E73 1250 aa11.74□□□□□ -0.53
SMPD4-204ENST00000430682 BEST3Q8N1M1 668 aa11.74□□□□□ -0.53
SMPD4-204ENST00000430682 PLD6Q8N2A8 252 aaKnown RBP11.74□□□□□ -0.53
SMPD4-204ENST00000430682 TBC1D19Q8N5T2 526 aa11.74□□□□□ -0.53
SMPD4-204ENST00000430682 SNX31Q8N9S9 440 aa11.74□□□□□ -0.53
SMPD4-204ENST00000430682 M1APQ8TC57 530 aa11.74□□□□□ -0.53
SMPD4-204ENST00000430682 SIGLEC12Q96PQ1 595 aa11.74□□□□□ -0.53
SMPD4-204ENST00000430682 F2RL3Q96RI0 385 aa11.74□□□□□ -0.53
SMPD4-204ENST00000430682 SLX1AQ9BQ83 275 aa11.74□□□□□ -0.53
SMPD4-204ENST00000430682 HES7Q9BYE0 225 aa11.74□□□□□ -0.53
SMPD4-204ENST00000430682 SLC29A3Q9BZD2 475 aa11.74□□□□□ -0.53
SMPD4-204ENST00000430682 CD244Q9BZW8 370 aa11.74□□□□□ -0.53
SMPD4-204ENST00000430682 CDC42EP4Q9H3Q1 356 aaKnown RBP11.74□□□□□ -0.53
SMPD4-204ENST00000430682 KCNK13Q9HB14 408 aa11.74□□□□□ -0.53
SMPD4-204ENST00000430682 MMP25Q9NPA2 562 aa11.74□□□□□ -0.53
SMPD4-204ENST00000430682 SNX15Q9NRS6 342 aa11.74□□□□□ -0.53
SMPD4-204ENST00000430682 ZNF358Q9NW07 568 aa11.74□□□□□ -0.53
SMPD4-204ENST00000430682 STMN3Q9NZ72 180 aa11.74□□□□□ -0.53
SMPD4-204ENST00000430682 GPRC5BQ9NZH0 403 aa11.74□□□□□ -0.53
SMPD4-204ENST00000430682 C19orf25Q9UFG5 118 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-204ENST00000430682 MYOCOSA0A1B0GUC4 107 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 TCRBV16S1A1N1A0A5B0 115 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 DYTNA2CJ06 578 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 OR5H15A6NDH6 313 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 WIPF3A6NGB9 483 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 CLGNO14967 610 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 CCNT2O60583 730 aaKnown RBP11.73□□□□□ -0.53
SMPD4-204ENST00000430682 PRMT3O60678 531 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 KERAO60938 352 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 H2AFYO75367 372 aaKnown RBP11.73□□□□□ -0.53
SMPD4-204ENST00000430682 SH3BGRLO75368 114 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 CLEC3AO75596 197 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 TACC2O95359 2948 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 LTA4HP09960 611 aaKnown RBP11.73□□□□□ -0.53
SMPD4-204ENST00000430682 RNH1P13489 461 aaKnown RBP11.73□□□□□ -0.53
SMPD4-204ENST00000430682 ICAM2P13598 275 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 IL10P22301 178 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 MST1P26927 711 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 CERS1P27544 350 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 PLA2G16P53816 162 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 ACTN3Q08043 901 aaPredicted RBP11.73□□□□□ -0.53
SMPD4-204ENST00000430682 ILF2Q12905 390 aaKnown RBP11.73□□□□□ -0.53
SMPD4-204ENST00000430682 NAB1Q13506 487 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 TUBA3CQ13748 450 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 PDK4Q16654 411 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 ABHD17BQ5VST6 288 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 FAM219BQ5XKK7 198 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 ABHD17CQ6PCB6 329 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 TUBA3EQ6PEY2 450 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 ZNF793Q6ZN11 406 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 QSOX2Q6ZRP7 698 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 ZNF227Q86WZ6 799 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 CYP4X1Q8N118 509 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 TCAIMQ8N3R3 496 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 ST6GALNAC3Q8NDV1 305 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 ELP5Q8TE02 316 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 SSC4DQ8WTU2 575 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 CCT6BQ92526 530 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 GAL3ST3Q96A11 431 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 CSF3RQ99062 836 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 FUT8Q9BYC5 575 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 ZNF407Q9C0G0 2248 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 RNF32Q9H0A6 362 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 EHD1Q9H4M9 534 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 ACSS3Q9H6R3 686 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 NMRAL1Q9HBL8 299 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 PRDM7Q9NQW5 492 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 ANKRD10Q9NXR5 420 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 NUDT4Q9NZJ9 180 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 ACOT9Q9Y305 439 aa11.73□□□□□ -0.53
SMPD4-204ENST00000430682 TRAV17A0A0B4J275 112 aa11.72□□□□□ -0.53
SMPD4-204ENST00000430682 SUPT3HB4E1H0 165 aa11.72□□□□□ -0.53
SMPD4-204ENST00000430682 RTCAO00442 366 aaKnown RBP11.72□□□□□ -0.53
SMPD4-204ENST00000430682 SUPT3HO75486 399 aa11.72□□□□□ -0.53
SMPD4-204ENST00000430682 ACSL3O95573 720 aa11.72□□□□□ -0.53
SMPD4-204ENST00000430682 LDLRP01130 860 aa11.72□□□□□ -0.53
SMPD4-204ENST00000430682 GP1BBP13224 206 aa11.72□□□□□ -0.53
SMPD4-204ENST00000430682 CRABP2P29373 138 aa11.72□□□□□ -0.53
SMPD4-204ENST00000430682 CD96P40200 585 aa11.72□□□□□ -0.53
SMPD4-204ENST00000430682 CASP2P42575 452 aa11.72□□□□□ -0.53
SMPD4-204ENST00000430682 UAP1Q16222 522 aaPredicted RBP11.72□□□□□ -0.53
SMPD4-204ENST00000430682 RELL1Q8IUW5 271 aa11.72□□□□□ -0.53
SMPD4-204ENST00000430682 SCUBE1Q8IWY4 988 aa11.72□□□□□ -0.53
SMPD4-204ENST00000430682 KRT78Q8N1N4 520 aa11.72□□□□□ -0.53
SMPD4-204ENST00000430682 MDS2Q8NDY4 140 aa11.72□□□□□ -0.53
SMPD4-204ENST00000430682 OR2L5Q8NG80 312 aa11.72□□□□□ -0.53
SMPD4-204ENST00000430682 UHMK1Q8TAS1 419 aaKnown RBP11.72□□□□□ -0.53
SMPD4-204ENST00000430682 STAG3L4Q8TBR4 150 aa11.72□□□□□ -0.53
SMPD4-204ENST00000430682 ZNF473Q8WTR7 871 aaKnown RBP11.72□□□□□ -0.53
SMPD4-204ENST00000430682 UBTD2Q8WUN7 234 aa11.72□□□□□ -0.53
SMPD4-204ENST00000430682 PTCD3Q96EY7 689 aaKnown RBP11.72□□□□□ -0.53
SMPD4-204ENST00000430682 LPAR4Q99677 370 aa11.72□□□□□ -0.53
SMPD4-204ENST00000430682 SORBS1Q9BX66 1292 aaKnown RBP11.72□□□□□ -0.53
SMPD4-204ENST00000430682 MS4A8Q9BY19 250 aa11.72□□□□□ -0.53
SMPD4-204ENST00000430682 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms