RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 CROCCQ5TZA2 2017 aa14.27□□□□□ -0.13
USB1-202ENST00000423271 A0A0G2JN53 185 aa14.26□□□□□ -0.13
USB1-202ENST00000423271 EXOC1LA0A1B0GW35 172 aa14.26□□□□□ -0.13
USB1-202ENST00000423271 FAM227AF5H4B4 570 aa14.26□□□□□ -0.13
USB1-202ENST00000423271 PRAMEF4O60810 478 aa14.26□□□□□ -0.13
USB1-202ENST00000423271 SERPINA6P08185 405 aa14.26□□□□□ -0.13
USB1-202ENST00000423271 INHBAP08476 426 aa14.26□□□□□ -0.13
USB1-202ENST00000423271 C1GALT1C1LP0DN25 315 aa14.26□□□□□ -0.13
USB1-202ENST00000423271 STMN1P16949 149 aa14.26□□□□□ -0.13
USB1-202ENST00000423271 GNAZP19086 355 aa14.26□□□□□ -0.13
USB1-202ENST00000423271 JAK1P23458 1154 aa14.26□□□□□ -0.13
USB1-202ENST00000423271 MSH2P43246 934 aa14.26□□□□□ -0.13
USB1-202ENST00000423271 SLC26A5P58743 744 aa14.26□□□□□ -0.13
USB1-202ENST00000423271 SKP1P63208 163 aa14.26□□□□□ -0.13
USB1-202ENST00000423271 BTG2P78543 158 aa14.26□□□□□ -0.13
USB1-202ENST00000423271 PMP22Q01453 160 aa14.26□□□□□ -0.13
USB1-202ENST00000423271 ACTN3Q08043 901 aaPredicted RBP14.26□□□□□ -0.13
USB1-202ENST00000423271 SLC29A2Q14542 456 aa14.26□□□□□ -0.13
USB1-202ENST00000423271 NAA30Q147X3 362 aaPredicted RBP14.26□□□□□ -0.13
USB1-202ENST00000423271 INAQ16352 499 aa14.26□□□□□ -0.13
USB1-202ENST00000423271 EXT1Q16394 746 aa14.26□□□□□ -0.13
USB1-202ENST00000423271 C4orf17Q53FE4 359 aa14.26□□□□□ -0.13
USB1-202ENST00000423271 PRAMEF9Q5VWM5 478 aa14.26□□□□□ -0.13
USB1-202ENST00000423271 H3F3CQ6NXT2 135 aa14.26□□□□□ -0.13
USB1-202ENST00000423271 GPSM1Q86YR5 675 aa14.26□□□□□ -0.13
USB1-202ENST00000423271 CA13Q8N1Q1 262 aa14.26□□□□□ -0.13
USB1-202ENST00000423271 M1APQ8TC57 530 aa14.26□□□□□ -0.13
USB1-202ENST00000423271 DCAKDQ8WVC6 231 aa14.26□□□□□ -0.13
USB1-202ENST00000423271 NR4A3Q92570 626 aa14.26□□□□□ -0.13
USB1-202ENST00000423271 LPAR4Q99677 370 aa14.26□□□□□ -0.13
USB1-202ENST00000423271 RHBGQ9H310 441 aa14.26□□□□□ -0.13
USB1-202ENST00000423271 CENPEQ02224 2701 aa14.25□□□□□ -0.13
USB1-202ENST00000423271 PRAMEF2O60811 474 aa14.25□□□□□ -0.13
USB1-202ENST00000423271 MAOAP21397 527 aa14.25□□□□□ -0.13
USB1-202ENST00000423271 COL8A1P27658 744 aa14.25□□□□□ -0.13
USB1-202ENST00000423271 GCAP28676 217 aa14.25□□□□□ -0.13
USB1-202ENST00000423271 HNRNPH1P31943 449 aaKnown RBP14.25□□□□□ -0.13
USB1-202ENST00000423271 HSPA7P48741 367 aa14.25□□□□□ -0.13
USB1-202ENST00000423271 KCNK10P57789 538 aa14.25□□□□□ -0.13
USB1-202ENST00000423271 TUBA3CQ13748 450 aa14.25□□□□□ -0.13
USB1-202ENST00000423271 ADNP2Q6IQ32 1131 aa14.25□□□□□ -0.13
USB1-202ENST00000423271 NIPAL1Q6NVV3 410 aa14.25□□□□□ -0.13
USB1-202ENST00000423271 TUBA3EQ6PEY2 450 aa14.25□□□□□ -0.13
USB1-202ENST00000423271 TMIGD1Q6UXZ0 262 aa14.25□□□□□ -0.13
USB1-202ENST00000423271 QSOX2Q6ZRP7 698 aa14.25□□□□□ -0.13
USB1-202ENST00000423271 RAPH1Q70E73 1250 aa14.25□□□□□ -0.13
USB1-202ENST00000423271 VN1R5Q7Z5H4 357 aa14.25□□□□□ -0.13
USB1-202ENST00000423271 KIF2BQ8N4N8 673 aa14.25□□□□□ -0.13
USB1-202ENST00000423271 AENQ8WTP8 325 aaKnown RBP14.25□□□□□ -0.13
USB1-202ENST00000423271 UBLCP1Q8WVY7 318 aaPredicted RBP14.25□□□□□ -0.13
USB1-202ENST00000423271 CCT6BQ92526 530 aa14.25□□□□□ -0.13
USB1-202ENST00000423271 EXT2Q93063 718 aa14.25□□□□□ -0.13
USB1-202ENST00000423271 ZNF354BQ96LW1 612 aa14.25□□□□□ -0.13
USB1-202ENST00000423271 PTCHD1Q96NR3 888 aa14.25□□□□□ -0.13
USB1-202ENST00000423271 SIGLEC12Q96PQ1 595 aa14.25□□□□□ -0.13
USB1-202ENST00000423271 HES7Q9BYE0 225 aa14.25□□□□□ -0.13
USB1-202ENST00000423271 PARD6BQ9BYG5 372 aa14.25□□□□□ -0.13
USB1-202ENST00000423271 SNX15Q9NRS6 342 aa14.25□□□□□ -0.13
USB1-202ENST00000423271 DNAJC11Q9NVH1 559 aa14.25□□□□□ -0.13
USB1-202ENST00000423271 ANKRD10Q9NXR5 420 aa14.25□□□□□ -0.13
USB1-202ENST00000423271 IKBKGQ9Y6K9 419 aa14.25□□□□□ -0.13
USB1-202ENST00000423271 TEX15Q9BXT5 2789 aa14.24□□□□□ -0.13
USB1-202ENST00000423271 IGKV3D-11A0A0A0MRZ8 115 aa14.24□□□□□ -0.13
USB1-202ENST00000423271 URADA6NGE7 173 aa14.24□□□□□ -0.13
USB1-202ENST00000423271 LRRTM2O43300 516 aa14.24□□□□□ -0.13
USB1-202ENST00000423271 PRMT3O60678 531 aa14.24□□□□□ -0.13
USB1-202ENST00000423271 RASAL1O95294 804 aa14.24□□□□□ -0.13
USB1-202ENST00000423271 TBX6O95947 436 aaPredicted RBP14.24□□□□□ -0.13
USB1-202ENST00000423271 SLC35E2BP0CK96 405 aa14.24□□□□□ -0.13
USB1-202ENST00000423271 RNH1P13489 461 aaKnown RBP14.24□□□□□ -0.13
USB1-202ENST00000423271 MST1P26927 711 aa14.24□□□□□ -0.13
USB1-202ENST00000423271 GGT5P36269 586 aa14.24□□□□□ -0.13
USB1-202ENST00000423271 SERPINB9P50453 376 aa14.24□□□□□ -0.13
USB1-202ENST00000423271 ATP6V0D1P61421 351 aa14.24□□□□□ -0.13
USB1-202ENST00000423271 BTN3A2P78410 334 aa14.24□□□□□ -0.13
USB1-202ENST00000423271 DLG1Q12959 904 aa14.24□□□□□ -0.13
USB1-202ENST00000423271 MEP1AQ16819 746 aa14.24□□□□□ -0.13
USB1-202ENST00000423271 ZNF766Q5HY98 468 aa14.24□□□□□ -0.13
USB1-202ENST00000423271 TAOK1Q7L7X3 1001 aa14.24□□□□□ -0.13
USB1-202ENST00000423271 MAMDC2Q7Z304 686 aaPredicted RBP14.24□□□□□ -0.13
USB1-202ENST00000423271 CYP4X1Q8N118 509 aa14.24□□□□□ -0.13
USB1-202ENST00000423271 TCAIMQ8N3R3 496 aa14.24□□□□□ -0.13
USB1-202ENST00000423271 SNX31Q8N9S9 440 aa14.24□□□□□ -0.13
USB1-202ENST00000423271 SUN3Q8TAQ9 357 aa14.24□□□□□ -0.13
USB1-202ENST00000423271 GAL3ST3Q96A11 431 aa14.24□□□□□ -0.13
USB1-202ENST00000423271 UBXN10Q96LJ8 280 aa14.24□□□□□ -0.13
USB1-202ENST00000423271 RRAGDQ9NQL2 400 aaPredicted RBP14.24□□□□□ -0.13
USB1-202ENST00000423271 NECTIN3Q9NQS3 549 aa14.24□□□□□ -0.13
USB1-202ENST00000423271 GPRC5BQ9NZH0 403 aa14.24□□□□□ -0.13
USB1-202ENST00000423271 CD274Q9NZQ7 290 aa14.24□□□□□ -0.13
USB1-202ENST00000423271 COPG2Q9UBF2 871 aa14.24□□□□□ -0.13
USB1-202ENST00000423271 ZNF180Q9UJW8 692 aa14.24□□□□□ -0.13
USB1-202ENST00000423271 ASB1Q9Y576 335 aa14.24□□□□□ -0.13
USB1-202ENST00000423271 TCRBV16S1A1N1A0A5B0 115 aa14.23□□□□□ -0.13
USB1-202ENST00000423271 GABRR3A8MPY1 467 aa14.23□□□□□ -0.13
USB1-202ENST00000423271 A8MUA0 341 aa14.23□□□□□ -0.13
USB1-202ENST00000423271 PSMD12O00232 456 aaPredicted RBP14.23□□□□□ -0.13
USB1-202ENST00000423271 ERI3O43414 337 aaKnown RBP14.23□□□□□ -0.13
USB1-202ENST00000423271 H2AFYO75367 372 aaKnown RBP14.23□□□□□ -0.13
USB1-202ENST00000423271 WISP2O76076 250 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms