RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 CFAP54Q96N23 3096 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 IGLV3-16A0A075B6K0 115 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 CLPXO76031 633 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 ST13P50502 369 aaKnown RBP12.78□□□□□ -0.36
MCF2L-213ENST00000421756 MAPK12P53778 367 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 RAB8AP61006 207 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 HOXC5Q00444 222 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 CDK6Q00534 326 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 SLC13A2Q13183 592 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 RBM48Q5RL73 367 aaKnown RBP12.78□□□□□ -0.36
MCF2L-213ENST00000421756 IGFN1Q86VF2 1251 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 FRMD1Q8N878 549 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 CXorf40AQ8TE69 158 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 C16orf78Q8WTQ4 265 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 RAB2BQ8WUD1 216 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 SLC5A11Q8WWX8 675 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 TAMM41Q96BW9 452 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 LMLNQ96KR4 655 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 FERD3LQ96RJ6 166 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 C11orf49Q9H6J7 331 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 RETREG1Q9H6L5 497 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 TM9SF3Q9HD45 589 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 TRANK1O15050 2925 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 COL4A4P53420 1690 aaPredicted RBP12.78□□□□□ -0.36
MCF2L-213ENST00000421756 A0A1W2PS29 197 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 TRBC2A0A5B9 178 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 MPC1LP0DKB6 136 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 ZNF30P17039 623 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 ZNF763Q0D2J5 394 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 PPIGQ13427 754 aaKnown RBP eCLIP12.78□□□□□ -0.364e-7■■■□□ 15.4
MCF2L-213ENST00000421756 INAQ16352 499 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 MPEG1Q2M385 716 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 METTL3Q86U44 580 aaKnown RBP12.78□□□□□ -0.36
MCF2L-213ENST00000421756 FAM129CQ86XR2 697 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 OR9A1PQ8NGU1 263 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 ZHX1-C8orf76Q96EF9 292 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 CHFRQ96EP1 664 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 VPS35Q96QK1 796 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 IL20RAQ9UHF4 553 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 FBXW2Q9UKT8 454 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 CAB39Q9Y376 341 aaPredicted RBP12.78□□□□□ -0.36
MCF2L-213ENST00000421756 A0A1W2PP55 124 aa12.77□□□□□ -0.36
MCF2L-213ENST00000421756 PSIP1O75475 530 aaKnown RBP12.77□□□□□ -0.36
MCF2L-213ENST00000421756 SEC14L2O76054 403 aa12.77□□□□□ -0.36
MCF2L-213ENST00000421756 ADRB3P13945 408 aa12.77□□□□□ -0.36
MCF2L-213ENST00000421756 GSTM2P28161 218 aa12.77□□□□□ -0.36
MCF2L-213ENST00000421756 COLEC12Q5KU26 742 aa12.77□□□□□ -0.36
MCF2L-213ENST00000421756 PRAMEF14Q5SWL7 426 aa12.77□□□□□ -0.36
MCF2L-213ENST00000421756 PRAMEF13Q5VWM6 474 aa12.77□□□□□ -0.36
MCF2L-213ENST00000421756 KIAA1614Q5VZ46 1190 aa12.77□□□□□ -0.36
MCF2L-213ENST00000421756 EIF3MQ7L2H7 374 aaKnown RBP12.77□□□□□ -0.36
MCF2L-213ENST00000421756 IQCF1Q8N6M8 205 aa12.77□□□□□ -0.36
MCF2L-213ENST00000421756 SPPL3Q8TCT6 385 aa12.77□□□□□ -0.36
MCF2L-213ENST00000421756 HHIPL1Q96JK4 782 aa12.77□□□□□ -0.36
MCF2L-213ENST00000421756 WFDC6Q9BQY6 131 aa12.77□□□□□ -0.36
MCF2L-213ENST00000421756 TMEM106CQ9BVX2 250 aa12.77□□□□□ -0.36
MCF2L-213ENST00000421756 TMEM245Q9H330 911 aa12.77□□□□□ -0.36
MCF2L-213ENST00000421756 MARCH7Q9H992 704 aa12.77□□□□□ -0.36
MCF2L-213ENST00000421756 ZNF556Q9HAH1 456 aa12.77□□□□□ -0.36
MCF2L-213ENST00000421756 GPSM3Q9Y4H4 160 aa12.77□□□□□ -0.36
MCF2L-213ENST00000421756 SLC5A10A0PJK1 596 aa12.77□□□□□ -0.37
MCF2L-213ENST00000421756 OR10H3O60404 316 aa12.77□□□□□ -0.37
MCF2L-213ENST00000421756 C1GALT1C1LP0DN25 315 aa12.77□□□□□ -0.37
MCF2L-213ENST00000421756 TRPC1P48995 793 aa12.77□□□□□ -0.37
MCF2L-213ENST00000421756 CSTF3Q12996 717 aaKnown RBP12.77□□□□□ -0.37
MCF2L-213ENST00000421756 GCNT6Q5T4J0 391 aa12.77□□□□□ -0.37
MCF2L-213ENST00000421756 GRHL2Q6ISB3 625 aa12.77□□□□□ -0.37
MCF2L-213ENST00000421756 AQP11Q8NBQ7 271 aa12.77□□□□□ -0.37
MCF2L-213ENST00000421756 OR8D1Q8WZ84 308 aa12.77□□□□□ -0.37
MCF2L-213ENST00000421756 REEP4Q9H6H4 257 aa12.77□□□□□ -0.37
MCF2L-213ENST00000421756 SACM1LQ9NTJ5 587 aa12.77□□□□□ -0.37
MCF2L-213ENST00000421756 FAM120CQ9NX05 1096 aaKnown RBP12.77□□□□□ -0.37
MCF2L-213ENST00000421756 NDUFAF4Q9P032 175 aa12.77□□□□□ -0.37
MCF2L-213ENST00000421756 TBC1D14Q9P2M4 693 aa12.77□□□□□ -0.37
MCF2L-213ENST00000421756 TMED5Q9Y3A6 229 aa12.77□□□□□ -0.37
MCF2L-213ENST00000421756 MID1O15344 667 aa12.76□□□□□ -0.37
MCF2L-213ENST00000421756 FUCA1P04066 466 aa12.76□□□□□ -0.37
MCF2L-213ENST00000421756 CA3P07451 260 aa12.76□□□□□ -0.37
MCF2L-213ENST00000421756 GPX2P18283 190 aa12.76□□□□□ -0.37
MCF2L-213ENST00000421756 TIE1P35590 1138 aa12.76□□□□□ -0.37
MCF2L-213ENST00000421756 IL12RB1P42701 662 aa12.76□□□□□ -0.37
MCF2L-213ENST00000421756 PRLHRP49683 370 aa12.76□□□□□ -0.37
MCF2L-213ENST00000421756 KCNJ10P78508 379 aa12.76□□□□□ -0.37
MCF2L-213ENST00000421756 MXD1Q05195 221 aa12.76□□□□□ -0.37
MCF2L-213ENST00000421756 ZNF77Q15935 545 aa12.76□□□□□ -0.37
MCF2L-213ENST00000421756 TBC1D25Q3MII6 688 aa12.76□□□□□ -0.37
MCF2L-213ENST00000421756 TECPR1Q7Z6L1 1165 aa12.76□□□□□ -0.37
MCF2L-213ENST00000421756 ENTHD1Q8IYW4 607 aa12.76□□□□□ -0.37
MCF2L-213ENST00000421756 C7orf57Q8NEG2 295 aa12.76□□□□□ -0.37
MCF2L-213ENST00000421756 BORCS5Q969J3 196 aa12.76□□□□□ -0.37
MCF2L-213ENST00000421756 TMEM203Q969S6 136 aa12.76□□□□□ -0.37
MCF2L-213ENST00000421756 CEP295NLQ96MC4 621 aa12.76□□□□□ -0.37
MCF2L-213ENST00000421756 C12orf66Q96MD2 445 aa12.76□□□□□ -0.37
MCF2L-213ENST00000421756 RC3H2Q9HBD1 1191 aaKnown RBP12.76□□□□□ -0.37
MCF2L-213ENST00000421756 SPATA6Q9NWH7 488 aaPredicted RBP12.76□□□□□ -0.37
MCF2L-213ENST00000421756 DNAJC27Q9NZQ0 273 aa12.76□□□□□ -0.37
MCF2L-213ENST00000421756 SERGEFQ9UGK8 458 aa12.76□□□□□ -0.37
MCF2L-213ENST00000421756 RNF6Q9Y252 685 aa12.76□□□□□ -0.37
MCF2L-213ENST00000421756 SH3PXD2BA1X283 911 aa12.76□□□□□ -0.37
MCF2L-213ENST00000421756 A8MU76 341 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms