RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 MRM3Q9HC36 420 aaKnown RBP11.94□□□□□ -0.5
CLCN4-203ENST00000421085 NEUROD4Q9HD90 331 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 STUB1Q9UNE7 303 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 ZNF451Q9Y4E5 1061 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 H3BMQ9 156 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 NDUFS4O43181 175 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 ATP1B2P14415 290 aaPredicted RBP11.94□□□□□ -0.5
CLCN4-203ENST00000421085 OPRL1P41146 370 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 LRRC32Q14392 662 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 NTRK2Q16620 822 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 C10orf62Q5T681 223 aaPredicted RBP11.94□□□□□ -0.5
CLCN4-203ENST00000421085 PLPP4Q5VZY2 271 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 REEP3Q6NUK4 255 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 COG8Q96MW5 612 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 NELL2Q99435 816 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 SPATA9Q9BWV2 254 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 ACTR6Q9GZN1 396 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 KCNH6Q9H252 994 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 PTGDR2Q9Y5Y4 395 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 CD8B2A6NJW9 211 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 RBBP9O75884 186 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 APODP05090 189 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 CD8BP10966 210 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 UBE2UQ5VVX9 321 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 FBXL22Q6P050 247 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 FUT10Q6P4F1 479 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 ZSWIM9Q86XI8 627 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 PRSS58Q8IYP2 241 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 CLDN19Q8N6F1 224 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 ZSCAN1Q8NBB4 408 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 DPF3Q92784 378 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 RIOK2Q9BVS4 552 aaKnown RBP11.93□□□□□ -0.5
CLCN4-203ENST00000421085 OR51B5Q9H339 312 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 CPNE5Q9HCH3 593 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 OR2S2Q9NQN1 319 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 NLKQ9UBE8 527 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 ERVK-19Q9WJR5 959 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 GPR89AB7ZAQ6 455 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 BHMG1C9JSJ3 638 aaPredicted RBP11.93□□□□□ -0.5
CLCN4-203ENST00000421085 M0R2N6 131 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 FARS2O95363 451 aaKnown RBP11.93□□□□□ -0.5
CLCN4-203ENST00000421085 CSTBP04080 98 aaKnown RBP11.93□□□□□ -0.5
CLCN4-203ENST00000421085 IL3P08700 152 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 GPR89BP0CG08 455 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 NPRL3Q12980 569 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 PTPRCAPQ14761 206 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.93□□□□□ -0.5
CLCN4-203ENST00000421085 CEACAM19Q7Z692 300 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 TICAM1Q8IUC6 712 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 PDZD9Q8IXQ8 264 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 OR4K1Q8NGD4 311 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 DENND1AQ8TEH3 1009 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 EIF5A2Q9GZV4 153 aaKnown RBP11.93□□□□□ -0.5
CLCN4-203ENST00000421085 FOLH1BQ9HBA9 442 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 VNN3Q9NY84 501 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 ARHGEF28Q8N1W1 1705 aaKnown RBP11.93□□□□□ -0.5
CLCN4-203ENST00000421085 PCDHGA12O60330 932 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 ITGA5P08648 1049 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 HSD17B2P37059 387 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 GALNT2Q10471 571 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 TMEM69Q5SWH9 247 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 ARSKQ6UWY0 536 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 CARM1Q86X55 608 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 DDX1Q92499 740 aaKnown RBP11.93□□□□□ -0.5
CLCN4-203ENST00000421085 RNF208Q9H0X6 261 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 MRPL15Q9P015 296 aaKnown RBP11.93□□□□□ -0.5
CLCN4-203ENST00000421085 PCDHGB2Q9Y5G2 931 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 HS3ST4Q9Y661 456 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 VIRMAQ69YN4 1812 aaKnown RBP11.93□□□□□ -0.5
CLCN4-203ENST00000421085 BTBD19C9JJ37 291 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 PEX10O60683 326 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 CD47Q08722 323 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 SPHARQ15513 63 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 LHFPL3Q86UP9 236 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 NDNFQ8TB73 568 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 FANK1Q8TC84 345 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 SLC35F5Q8WV83 523 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 SUV39H2Q9H5I1 410 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 TMEM184CQ9NVA4 438 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 TAC3Q9UHF0 121 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 EIF1AYO14602 144 aaKnown RBP11.93□□□□□ -0.5
CLCN4-203ENST00000421085 CNTN5O94779 1100 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 PET100P0DJ07 73 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 EIF1AXP47813 144 aaKnown RBP11.93□□□□□ -0.5
CLCN4-203ENST00000421085 SOX2P48431 317 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 CTBP2P56545 445 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 CARD16Q5EG05 197 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 TLDC1Q6P9B6 456 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 RAB8BQ92930 207 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 PEX13Q92968 403 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 CCM2Q9BSQ5 444 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 DOHHQ9BU89 302 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 PARPBPQ9NWS1 579 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 LAMP5Q9UJQ1 280 aa11.93□□□□□ -0.5
CLCN4-203ENST00000421085 A0A096LPI6 279 aa11.92□□□□□ -0.5
CLCN4-203ENST00000421085 BLOC1S5-TXNDC5H3BN57 136 aa11.92□□□□□ -0.5
CLCN4-203ENST00000421085 EEDO75530 441 aaKnown RBP11.92□□□□□ -0.5
CLCN4-203ENST00000421085 CLDN7O95471 211 aa11.92□□□□□ -0.5
CLCN4-203ENST00000421085 HCKP08631 526 aa11.92□□□□□ -0.5
CLCN4-203ENST00000421085 CCND3P30281 292 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms