RNA–Protein interactions for RNA: ENST00000420077.5

SEMA4F-204, Transcript of ssemaphorin 4F, humanhuman

TSL 1 (best)

Gene SEMA4F, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4F-204ENST00000420077 C1GALT1Q9NS00 363 aa16.09■□□□□ 0.17
SEMA4F-204ENST00000420077 GPR34Q9UPC5 381 aa16.09■□□□□ 0.17
SEMA4F-204ENST00000420077 B3GNT3Q9Y2A9 372 aa16.09■□□□□ 0.17
SEMA4F-204ENST00000420077 MRPS23Q9Y3D9 190 aaKnown RBP16.09■□□□□ 0.17
SEMA4F-204ENST00000420077 TSC22D4Q9Y3Q8 395 aa16.09■□□□□ 0.17
SEMA4F-204ENST00000420077 SZT2Q5T011 3432 aa16.09■□□□□ 0.17
SEMA4F-204ENST00000420077 EDDM13A0A1B0GTR0 161 aa16.08■□□□□ 0.16
SEMA4F-204ENST00000420077 TLL1O43897 1013 aa16.08■□□□□ 0.16
SEMA4F-204ENST00000420077 LZTS3O60299 673 aaPredicted RBP16.08■□□□□ 0.16
SEMA4F-204ENST00000420077 KLK1P06870 262 aa16.08■□□□□ 0.16
SEMA4F-204ENST00000420077 PSMB9P28065 219 aa16.08■□□□□ 0.16
SEMA4F-204ENST00000420077 OPRL1P41146 370 aa16.08■□□□□ 0.16
SEMA4F-204ENST00000420077 ST13P50502 369 aaKnown RBP16.08■□□□□ 0.16
SEMA4F-204ENST00000420077 PHEXP78562 749 aa16.08■□□□□ 0.16
SEMA4F-204ENST00000420077 EEF1A2Q05639 463 aaKnown RBP16.08■□□□□ 0.16
SEMA4F-204ENST00000420077 ADPRMQ3LIE5 342 aa16.08■□□□□ 0.16
SEMA4F-204ENST00000420077 TBC1D25Q3MII6 688 aa16.08■□□□□ 0.16
SEMA4F-204ENST00000420077 IER5LQ5T953 404 aa16.08■□□□□ 0.16
SEMA4F-204ENST00000420077 GPR153Q6NV75 609 aa16.08■□□□□ 0.16
SEMA4F-204ENST00000420077 TRIM40Q6P9F5 258 aa16.08■□□□□ 0.16
SEMA4F-204ENST00000420077 ZNF740Q8NDX6 193 aa16.08■□□□□ 0.16
SEMA4F-204ENST00000420077 OR4C15Q8NGM1 316 aa16.08■□□□□ 0.16
SEMA4F-204ENST00000420077 UBE2E3Q969T4 207 aa16.08■□□□□ 0.16
SEMA4F-204ENST00000420077 KCNC2Q96PR1 638 aa16.08■□□□□ 0.16
SEMA4F-204ENST00000420077 ZNF300Q96RE9 604 aaPredicted RBP16.08■□□□□ 0.16
SEMA4F-204ENST00000420077 FEVQ99581 238 aa16.08■□□□□ 0.16
SEMA4F-204ENST00000420077 THSD1Q9NS62 852 aa16.08■□□□□ 0.16
SEMA4F-204ENST00000420077 TAS2R9Q9NYW1 312 aa16.08■□□□□ 0.16
SEMA4F-204ENST00000420077 SPASTQ9UBP0 616 aa16.08■□□□□ 0.16
SEMA4F-204ENST00000420077 RNF6Q9Y252 685 aa16.08■□□□□ 0.16
SEMA4F-204ENST00000420077 REV3LO60673 3130 aa16.08■□□□□ 0.16
SEMA4F-204ENST00000420077 GRXCR1A8MXD5 290 aa16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 PI15O43692 258 aa16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 PTX3P26022 381 aaPredicted RBP16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 PRIM2P49643 509 aa16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 CSNK2BP67870 215 aa16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 DGCR6Q14129 220 aa16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 ELAVL3Q14576 367 aaKnown RBP16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 SLC5A12Q1EHB4 618 aa16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 PRSS53Q2L4Q9 553 aa16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 PRAMEF14Q5SWL7 426 aa16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 PRAMEF13Q5VWM6 474 aa16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 UNC5DQ6UXZ4 953 aa16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 DCDC5Q6ZRR9 648 aa16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 IKBIPQ70UQ0 350 aa16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 AHSA2Q719I0 299 aa16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 VN1R5Q7Z5H4 357 aa16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 C11orf96Q7Z7L8 435 aa16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 RNF130Q86XS8 419 aa16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 OR10G2Q8NGC3 310 aa16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 NDNFQ8TB73 568 aa16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 SETD7Q8WTS6 366 aaKnown RBP16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 ZNF707Q96C28 371 aaPredicted RBP16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 SH3YL1Q96HL8 342 aaPredicted RBP16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 COX4I2Q96KJ9 171 aa16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 OR52A5Q9H2C5 316 aa16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 CCDC88CQ9P219 2028 aa16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 PRAMEF25A6NGN4 478 aa16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 VEGFDO43915 354 aa16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 CBFA2T3O75081 653 aa16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 IL3P08700 152 aa16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 CHI3L1P36222 383 aaPredicted RBP16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 GGT2P36268 569 aa16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 OR1E2P47887 323 aa16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 SPIBQ01892 262 aa16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 ZNF630Q2M218 657 aaPredicted RBP16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 LCTLQ6UWM7 567 aa16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 Q6ZPB1 254 aaPredicted RBP16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 FAM83HQ6ZRV2 1179 aaPredicted RBP16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 LINC00299Q6ZSB3 139 aa16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 ZNF554Q86TJ5 538 aa16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 SLCO6A1Q86UG4 719 aa16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 OR5AK3PQ8NH89 298 aa16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 DNASE1L2Q92874 299 aa16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 IL17FQ96PD4 163 aa16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 TDRKHQ9Y2W6 561 aaKnown RBP16.07■□□□□ 0.16
SEMA4F-204ENST00000420077 OR2A25A4D2G3 310 aa16.06■□□□□ 0.16
SEMA4F-204ENST00000420077 IDUAP35475 653 aa16.06■□□□□ 0.16
SEMA4F-204ENST00000420077 SLC6A11P48066 632 aa16.06■□□□□ 0.16
SEMA4F-204ENST00000420077 CDK6Q00534 326 aa16.06■□□□□ 0.16
SEMA4F-204ENST00000420077 OCA2Q04671 838 aa16.06■□□□□ 0.16
SEMA4F-204ENST00000420077 CRB2Q5IJ48 1285 aa16.06■□□□□ 0.16
SEMA4F-204ENST00000420077 TMIGD1Q6UXZ0 262 aa16.06■□□□□ 0.16
SEMA4F-204ENST00000420077 IGFN1Q86VF2 1251 aa16.06■□□□□ 0.16
SEMA4F-204ENST00000420077 SLC5A8Q8N695 610 aa16.06■□□□□ 0.16
SEMA4F-204ENST00000420077 CHPT1Q8WUD6 406 aa16.06■□□□□ 0.16
SEMA4F-204ENST00000420077 VMP1Q96GC9 406 aa16.06■□□□□ 0.16
SEMA4F-204ENST00000420077 PPP1R16AQ96I34 528 aa16.06■□□□□ 0.16
SEMA4F-204ENST00000420077 TMEM121BQ9BXQ6 578 aaPredicted RBP16.06■□□□□ 0.16
SEMA4F-204ENST00000420077 ERGIC3Q9Y282 383 aa16.06■□□□□ 0.16
SEMA4F-204ENST00000420077 ASF1AQ9Y294 204 aa16.06■□□□□ 0.16
SEMA4F-204ENST00000420077 MAP4K5Q9Y4K4 846 aa16.06■□□□□ 0.16
SEMA4F-204ENST00000420077 PCYT1BQ9Y5K3 369 aaPredicted RBP16.06■□□□□ 0.16
SEMA4F-204ENST00000420077 A0A1W2PRB8 838 aa16.06■□□□□ 0.16
SEMA4F-204ENST00000420077 CLDN25C9JDP6 229 aa16.06■□□□□ 0.16
SEMA4F-204ENST00000420077 SULT1C4O75897 302 aa16.06■□□□□ 0.16
SEMA4F-204ENST00000420077 ARAFP10398 606 aa16.06■□□□□ 0.16
SEMA4F-204ENST00000420077 ANXA8P13928 327 aa16.06■□□□□ 0.16
SEMA4F-204ENST00000420077 ITGA2P17301 1181 aa16.06■□□□□ 0.16
SEMA4F-204ENST00000420077 VIPR2P41587 438 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms