RNA–Protein interactions for RNA: ENST00000419016.6

CHMP5-202, Transcript of charged multivesicular body protein 5, humanhuman

TSL 2 BASIC

Gene CHMP5, Length 1,957 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-202ENST00000419016 NDE1Q9NXR1 346 aa13.11□□□□□ -0.31
CHMP5-202ENST00000419016 TMEM9Q9P0T7 183 aa13.11□□□□□ -0.31
CHMP5-202ENST00000419016 PDP2Q9P2J9 529 aa13.11□□□□□ -0.31
CHMP5-202ENST00000419016 PCDHGA7Q9Y5G6 932 aa13.11□□□□□ -0.31
CHMP5-202ENST00000419016 A0A0G2JN53 185 aa13.11□□□□□ -0.31
CHMP5-202ENST00000419016 ZSCAN9O15535 394 aaPredicted RBP13.11□□□□□ -0.31
CHMP5-202ENST00000419016 SRPX2O60687 465 aaPredicted RBP13.11□□□□□ -0.31
CHMP5-202ENST00000419016 ZBTB11O95625 1053 aaPredicted RBP13.11□□□□□ -0.31
CHMP5-202ENST00000419016 NPPAP01160 153 aa13.11□□□□□ -0.31
CHMP5-202ENST00000419016 CTSBP07858 339 aa13.11□□□□□ -0.31
CHMP5-202ENST00000419016 FURINP09958 794 aa13.11□□□□□ -0.31
CHMP5-202ENST00000419016 ZNF806P0C7X5 589 aa13.11□□□□□ -0.31
CHMP5-202ENST00000419016 PIM1P11309 404 aaPredicted RBP13.11□□□□□ -0.31
CHMP5-202ENST00000419016 MAPK12P53778 367 aa13.11□□□□□ -0.31
CHMP5-202ENST00000419016 PRTGQ2VWP7 1150 aa13.11□□□□□ -0.31
CHMP5-202ENST00000419016 TRIM40Q6P9F5 258 aa13.11□□□□□ -0.31
CHMP5-202ENST00000419016 SLC2A7Q6PXP3 512 aa13.11□□□□□ -0.31
CHMP5-202ENST00000419016 C16orf89Q6UX73 402 aa13.11□□□□□ -0.31
CHMP5-202ENST00000419016 MSANTD1Q6ZTZ1 278 aa13.11□□□□□ -0.31
CHMP5-202ENST00000419016 USP53Q70EK8 1073 aa13.11□□□□□ -0.31
CHMP5-202ENST00000419016 PRSS42Q7Z5A4 293 aa13.11□□□□□ -0.31
CHMP5-202ENST00000419016 ACOT4Q8N9L9 421 aa13.11□□□□□ -0.31
CHMP5-202ENST00000419016 RERGQ96A58 199 aaPredicted RBP13.11□□□□□ -0.31
CHMP5-202ENST00000419016 REEP4Q9H6H4 257 aa13.11□□□□□ -0.31
CHMP5-202ENST00000419016 SLAMF8Q9P0V8 285 aa13.11□□□□□ -0.31
CHMP5-202ENST00000419016 NEUROG3Q9Y4Z2 214 aa13.11□□□□□ -0.31
CHMP5-202ENST00000419016 A0A1W2PQM1 296 aa13.1□□□□□ -0.31
CHMP5-202ENST00000419016 CPED1A4D0V7 1026 aa13.1□□□□□ -0.31
CHMP5-202ENST00000419016 TBX19O60806 448 aa13.1□□□□□ -0.31
CHMP5-202ENST00000419016 IL3P08700 152 aa13.1□□□□□ -0.31
CHMP5-202ENST00000419016 LAMP1P11279 417 aa13.1□□□□□ -0.31
CHMP5-202ENST00000419016 S100A3P33764 101 aa13.1□□□□□ -0.31
CHMP5-202ENST00000419016 PGM1P36871 562 aa13.1□□□□□ -0.31
CHMP5-202ENST00000419016 SSR2P43308 183 aa13.1□□□□□ -0.31
CHMP5-202ENST00000419016 RAB8AP61006 207 aa13.1□□□□□ -0.31
CHMP5-202ENST00000419016 MC1RQ01726 317 aa13.1□□□□□ -0.31
CHMP5-202ENST00000419016 KLC1Q07866 573 aa13.1□□□□□ -0.31
CHMP5-202ENST00000419016 ZNF574Q6ZN55 896 aaPredicted RBP13.1□□□□□ -0.31
CHMP5-202ENST00000419016 TMPRSS9Q7Z410 1059 aa13.1□□□□□ -0.31
CHMP5-202ENST00000419016 TMEM132CQ8N3T6 1108 aa13.1□□□□□ -0.31
CHMP5-202ENST00000419016 CSNK1A1LQ8N752 337 aa13.1□□□□□ -0.31
CHMP5-202ENST00000419016 OR8K5Q8NH50 307 aa13.1□□□□□ -0.31
CHMP5-202ENST00000419016 KLHL6Q8WZ60 621 aa13.1□□□□□ -0.31
CHMP5-202ENST00000419016 LRRC58Q96CX6 371 aa13.1□□□□□ -0.31
CHMP5-202ENST00000419016 MTERF3Q96E29 417 aa13.1□□□□□ -0.31
CHMP5-202ENST00000419016 ZNF764Q96H86 408 aaPredicted RBP13.1□□□□□ -0.31
CHMP5-202ENST00000419016 SLC41A2Q96JW4 573 aa13.1□□□□□ -0.31
CHMP5-202ENST00000419016 OR52E6Q96RD3 313 aa13.1□□□□□ -0.31
CHMP5-202ENST00000419016 CCDC3Q9BQI4 270 aa13.1□□□□□ -0.31
CHMP5-202ENST00000419016 NUDT22Q9BRQ3 303 aa13.1□□□□□ -0.31
CHMP5-202ENST00000419016 THTPAQ9BU02 230 aa13.1□□□□□ -0.31
CHMP5-202ENST00000419016 KCNH6Q9H252 994 aa13.1□□□□□ -0.31
CHMP5-202ENST00000419016 ERVK-11Q9UQG0 969 aa13.1□□□□□ -0.31
CHMP5-202ENST00000419016 MAN2B2Q9Y2E5 1009 aa13.1□□□□□ -0.31
CHMP5-202ENST00000419016 ASB4Q9Y574 426 aa13.1□□□□□ -0.31
CHMP5-202ENST00000419016 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.1□□□□□ -0.31
CHMP5-202ENST00000419016 CDX4O14627 284 aaPredicted RBP13.09□□□□□ -0.31
CHMP5-202ENST00000419016 B3GALT4O96024 378 aa13.09□□□□□ -0.31
CHMP5-202ENST00000419016 FAM58BPP0C7Q3 252 aa13.09□□□□□ -0.31
CHMP5-202ENST00000419016 ZNF888P0CJ79 500 aaPredicted RBP13.09□□□□□ -0.31
CHMP5-202ENST00000419016 HOXB9P17482 250 aaPredicted RBP13.09□□□□□ -0.31
CHMP5-202ENST00000419016 PTPN6P29350 595 aa13.09□□□□□ -0.31
CHMP5-202ENST00000419016 HPCAL1P37235 193 aa13.09□□□□□ -0.31
CHMP5-202ENST00000419016 KIR3DL1P43629 444 aa13.09□□□□□ -0.31
CHMP5-202ENST00000419016 VSX2P58304 361 aaPredicted RBP13.09□□□□□ -0.31
CHMP5-202ENST00000419016 PSME3P61289 254 aa13.09□□□□□ -0.31
CHMP5-202ENST00000419016 TGM3Q08188 693 aa13.09□□□□□ -0.31
CHMP5-202ENST00000419016 C2orf80Q0P641 193 aa13.09□□□□□ -0.31
CHMP5-202ENST00000419016 PRSS53Q2L4Q9 553 aa13.09□□□□□ -0.31
CHMP5-202ENST00000419016 TRMT5Q32P41 509 aaKnown RBP13.09□□□□□ -0.31
CHMP5-202ENST00000419016 TMEM71Q6P5X7 295 aa13.09□□□□□ -0.31
CHMP5-202ENST00000419016 MMP21Q8N119 569 aa13.09□□□□□ -0.31
CHMP5-202ENST00000419016 PRSS33Q8NF86 280 aa13.09□□□□□ -0.31
CHMP5-202ENST00000419016 CLPTM1LQ96KA5 538 aa13.09□□□□□ -0.31
CHMP5-202ENST00000419016 HOPXQ9BPY8 73 aaPredicted RBP13.09□□□□□ -0.31
CHMP5-202ENST00000419016 LRFN3Q9BTN0 628 aa13.09□□□□□ -0.31
CHMP5-202ENST00000419016 PDE7BQ9NP56 450 aa13.09□□□□□ -0.31
CHMP5-202ENST00000419016 GID8Q9NWU2 228 aa13.09□□□□□ -0.31
CHMP5-202ENST00000419016 CROTQ9UKG9 612 aa13.09□□□□□ -0.31
CHMP5-202ENST00000419016 PRPF19Q9UMS4 504 aaKnown RBP13.09□□□□□ -0.31
CHMP5-202ENST00000419016 MRPS2Q9Y399 296 aaKnown RBP13.09□□□□□ -0.31
CHMP5-202ENST00000419016 SLC22A7Q9Y694 548 aa13.09□□□□□ -0.31
CHMP5-202ENST00000419016 TRBV5-3A0A0A0MS03 114 aa13.09□□□□□ -0.31
CHMP5-202ENST00000419016 ARHGAP10A1A4S6 786 aa13.09□□□□□ -0.31
CHMP5-202ENST00000419016 URADA6NGE7 173 aa13.09□□□□□ -0.31
CHMP5-202ENST00000419016 H3BMH7 237 aa13.09□□□□□ -0.31
CHMP5-202ENST00000419016 TOX3O15405 576 aaPredicted RBP13.09□□□□□ -0.31
CHMP5-202ENST00000419016 MSL3P1P0C860 447 aa13.09□□□□□ -0.31
CHMP5-202ENST00000419016 COX7A2P14406 83 aa13.09□□□□□ -0.31
CHMP5-202ENST00000419016 DDCP20711 480 aa13.09□□□□□ -0.31
CHMP5-202ENST00000419016 GRK6P43250 576 aa13.09□□□□□ -0.31
CHMP5-202ENST00000419016 HNRNPFP52597 415 aaKnown RBP13.09□□□□□ -0.31
CHMP5-202ENST00000419016 ATXN3P54252 364 aaPredicted RBP13.09□□□□□ -0.31
CHMP5-202ENST00000419016 CCL7P80098 99 aa13.09□□□□□ -0.31
CHMP5-202ENST00000419016 FOXM1Q08050 763 aa13.09□□□□□ -0.31
CHMP5-202ENST00000419016 SLAMF1Q13291 335 aa13.09□□□□□ -0.31
CHMP5-202ENST00000419016 SUZ12Q15022 739 aaKnown RBP13.09□□□□□ -0.31
CHMP5-202ENST00000419016 MAPKAPK3Q16644 382 aa13.09□□□□□ -0.31
CHMP5-202ENST00000419016 MPEG1Q2M385 716 aa13.09□□□□□ -0.31
CHMP5-202ENST00000419016 DEFB110Q30KQ9 67 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms