RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 ARHGAP9Q9BRR9 750 aa21.84■■□□□ 1.09
SMARCB1-205ENST00000417137 AICDAQ9GZX7 198 aa21.84■■□□□ 1.09
SMARCB1-205ENST00000417137 DMRT3Q9NQL9 472 aa21.84■■□□□ 1.09
SMARCB1-205ENST00000417137 SLC17A7Q9P2U7 560 aa21.84■■□□□ 1.09
SMARCB1-205ENST00000417137 ZNF860A6NHJ4 632 aa21.83■■□□□ 1.09
SMARCB1-205ENST00000417137 ERVH48-1M5A8F1 160 aa21.83■■□□□ 1.09
SMARCB1-205ENST00000417137 PPP6CO00743 305 aa21.83■■□□□ 1.09
SMARCB1-205ENST00000417137 CHST10O43529 356 aa21.83■■□□□ 1.09
SMARCB1-205ENST00000417137 B3GALT2O43825 422 aa21.83■■□□□ 1.09
SMARCB1-205ENST00000417137 TYROBPO43914 113 aa21.83■■□□□ 1.09
SMARCB1-205ENST00000417137 CYC1P08574 325 aa21.83■■□□□ 1.09
SMARCB1-205ENST00000417137 CREB1P16220 341 aa21.83■■□□□ 1.09
SMARCB1-205ENST00000417137 RAP1GDS1P52306 607 aa21.83■■□□□ 1.09
SMARCB1-205ENST00000417137 ARFIP1P53367 373 aa21.83■■□□□ 1.09
SMARCB1-205ENST00000417137 MTTPP55157 894 aa21.83■■□□□ 1.09
SMARCB1-205ENST00000417137 AP5B1Q2VPB7 878 aa21.83■■□□□ 1.09
SMARCB1-205ENST00000417137 C10orf107Q8IVU9 208 aa21.83■■□□□ 1.09
SMARCB1-205ENST00000417137 ZC3H7AQ8IWR0 971 aaKnown RBP21.83■■□□□ 1.09
SMARCB1-205ENST00000417137 RGMAQ96B86 450 aa21.83■■□□□ 1.09
SMARCB1-205ENST00000417137 SERINC2Q96SA4 455 aa21.83■■□□□ 1.09
SMARCB1-205ENST00000417137 GSTO2Q9H4Y5 243 aa21.83■■□□□ 1.09
SMARCB1-205ENST00000417137 ACSS2Q9NR19 701 aa21.83■■□□□ 1.09
SMARCB1-205ENST00000417137 MKL2Q9ULH7 1088 aa21.83■■□□□ 1.09
SMARCB1-205ENST00000417137 PPT2Q9UMR5 302 aa21.83■■□□□ 1.09
SMARCB1-205ENST00000417137 LAMA5O15230 3695 aa21.82■■□□□ 1.08
SMARCB1-205ENST00000417137 MAGEB17A8MXT2 336 aa21.82■■□□□ 1.08
SMARCB1-205ENST00000417137 IDSB3KWA1 339 aa21.82■■□□□ 1.08
SMARCB1-205ENST00000417137 PSMD12O00232 456 aaPredicted RBP21.82■■□□□ 1.08
SMARCB1-205ENST00000417137 OR4F21O95013 312 aa21.82■■□□□ 1.08
SMARCB1-205ENST00000417137 B3GALT4O96024 378 aa21.82■■□□□ 1.08
SMARCB1-205ENST00000417137 KRT6AP02538 564 aa21.82■■□□□ 1.08
SMARCB1-205ENST00000417137 KRT6BP04259 564 aa21.82■■□□□ 1.08
SMARCB1-205ENST00000417137 ENO1P06733 434 aaKnown RBP21.82■■□□□ 1.08
SMARCB1-205ENST00000417137 RNH1P13489 461 aaKnown RBP21.82■■□□□ 1.08
SMARCB1-205ENST00000417137 JAK1P23458 1154 aa21.82■■□□□ 1.08
SMARCB1-205ENST00000417137 TSFMP43897 325 aaKnown RBP21.82■■□□□ 1.08
SMARCB1-205ENST00000417137 KRT6CP48668 564 aa21.82■■□□□ 1.08
SMARCB1-205ENST00000417137 NEK2P51955 445 aa21.82■■□□□ 1.08
SMARCB1-205ENST00000417137 RRADP55042 308 aa21.82■■□□□ 1.08
SMARCB1-205ENST00000417137 FOXL2P58012 376 aa21.82■■□□□ 1.08
SMARCB1-205ENST00000417137 RPS13P62277 151 aaKnown RBP21.82■■□□□ 1.08
SMARCB1-205ENST00000417137 CUL3Q13618 768 aa21.82■■□□□ 1.08
SMARCB1-205ENST00000417137 RCN2Q14257 317 aa21.82■■□□□ 1.08
SMARCB1-205ENST00000417137 PCLAFQ15004 111 aa21.82■■□□□ 1.08
SMARCB1-205ENST00000417137 MFSD4BQ5TF39 518 aa21.82■■□□□ 1.08
SMARCB1-205ENST00000417137 LETMD1Q6P1Q0 360 aa21.82■■□□□ 1.08
SMARCB1-205ENST00000417137 MED25Q71SY5 747 aa21.82■■□□□ 1.08
SMARCB1-205ENST00000417137 MRGPREQ86SM8 312 aa21.82■■□□□ 1.08
SMARCB1-205ENST00000417137 LAPTM4BQ86VI4 370 aa21.82■■□□□ 1.08
SMARCB1-205ENST00000417137 TMEM102Q8N9M5 508 aaPredicted RBP21.82■■□□□ 1.08
SMARCB1-205ENST00000417137 OR5T3Q8NGG3 340 aa21.82■■□□□ 1.08
SMARCB1-205ENST00000417137 EXTL1Q92935 676 aa21.82■■□□□ 1.08
SMARCB1-205ENST00000417137 TBC1D20Q96BZ9 403 aa21.82■■□□□ 1.08
SMARCB1-205ENST00000417137 MTFMTQ96DP5 389 aaKnown RBP21.82■■□□□ 1.08
SMARCB1-205ENST00000417137 WBP1Q96G27 269 aa21.82■■□□□ 1.08
SMARCB1-205ENST00000417137 PEX11GQ96HA9 241 aa21.82■■□□□ 1.08
SMARCB1-205ENST00000417137 FER1L6-AS2Q96M78 137 aa21.82■■□□□ 1.08
SMARCB1-205ENST00000417137 QRFPRQ96P65 431 aa21.82■■□□□ 1.08
SMARCB1-205ENST00000417137 UBL7Q96S82 380 aaPredicted RBP21.82■■□□□ 1.08
SMARCB1-205ENST00000417137 SERPINI1Q99574 410 aa21.82■■□□□ 1.08
SMARCB1-205ENST00000417137 SLC29A3Q9BZD2 475 aa21.82■■□□□ 1.08
SMARCB1-205ENST00000417137 OR51B5Q9H339 312 aa21.82■■□□□ 1.08
SMARCB1-205ENST00000417137 KCNMB2Q9Y691 235 aa21.82■■□□□ 1.08
SMARCB1-205ENST00000417137 A0A0G2JN53 185 aa21.81■■□□□ 1.08
SMARCB1-205ENST00000417137 TM9SF1O15321 606 aa21.81■■□□□ 1.08
SMARCB1-205ENST00000417137 ESRRBO95718 433 aa21.81■■□□□ 1.08
SMARCB1-205ENST00000417137 HMOX2P30519 316 aa21.81■■□□□ 1.08
SMARCB1-205ENST00000417137 MINDY4Q4G0A6 757 aa21.81■■□□□ 1.08
SMARCB1-205ENST00000417137 SOWAHCQ53LP3 525 aaPredicted RBP21.81■■□□□ 1.08
SMARCB1-205ENST00000417137 FRMD7Q6ZUT3 714 aa21.81■■□□□ 1.08
SMARCB1-205ENST00000417137 HDXQ7Z353 690 aa21.81■■□□□ 1.08
SMARCB1-205ENST00000417137 PPP1R32Q7Z5V6 425 aa21.81■■□□□ 1.08
SMARCB1-205ENST00000417137 CDYL2Q8N8U2 506 aa21.81■■□□□ 1.08
SMARCB1-205ENST00000417137 METTL6Q8TCB7 284 aa21.81■■□□□ 1.08
SMARCB1-205ENST00000417137 ADAMTS18Q8TE60 1221 aa21.81■■□□□ 1.08
SMARCB1-205ENST00000417137 SELENOMQ8WWX9 145 aa21.81■■□□□ 1.08
SMARCB1-205ENST00000417137 METTL21AQ8WXB1 218 aa21.81■■□□□ 1.08
SMARCB1-205ENST00000417137 TTC9Q92623 222 aa21.81■■□□□ 1.08
SMARCB1-205ENST00000417137 ZBTB9Q96C00 473 aa21.81■■□□□ 1.08
SMARCB1-205ENST00000417137 CNDP1Q96KN2 507 aa21.81■■□□□ 1.08
SMARCB1-205ENST00000417137 MID1IP1Q9NPA3 183 aa21.81■■□□□ 1.08
SMARCB1-205ENST00000417137 KCNK9Q9NPC2 374 aa21.81■■□□□ 1.08
SMARCB1-205ENST00000417137 PRDM7Q9NQW5 492 aa21.81■■□□□ 1.08
SMARCB1-205ENST00000417137 NMRK1Q9NWW6 199 aa21.81■■□□□ 1.08
SMARCB1-205ENST00000417137 P4HTMQ9NXG6 502 aa21.81■■□□□ 1.08
SMARCB1-205ENST00000417137 A0A1B0GTL3 188 aa21.8■■□□□ 1.08
SMARCB1-205ENST00000417137 C4orf51C9J302 202 aa21.8■■□□□ 1.08
SMARCB1-205ENST00000417137 AGPSO00116 658 aa21.8■■□□□ 1.08
SMARCB1-205ENST00000417137 SH3BGRLO75368 114 aa21.8■■□□□ 1.08
SMARCB1-205ENST00000417137 FHP07954 510 aa21.8■■□□□ 1.08
SMARCB1-205ENST00000417137 ALDH3A1P30838 453 aa21.8■■□□□ 1.08
SMARCB1-205ENST00000417137 OLR1P78380 273 aa21.8■■□□□ 1.08
SMARCB1-205ENST00000417137 ATP1A4Q13733 1029 aa21.8■■□□□ 1.08
SMARCB1-205ENST00000417137 TUBB8Q3ZCM7 444 aa21.8■■□□□ 1.08
SMARCB1-205ENST00000417137 SGO1Q5FBB7 561 aa21.8■■□□□ 1.08
SMARCB1-205ENST00000417137 OR4C11Q6IEV9 310 aa21.8■■□□□ 1.08
SMARCB1-205ENST00000417137 APLFQ8IW19 511 aaPredicted RBP21.8■■□□□ 1.08
SMARCB1-205ENST00000417137 HOMEZQ8IX15 550 aa21.8■■□□□ 1.08
SMARCB1-205ENST00000417137 CA13Q8N1Q1 262 aa21.8■■□□□ 1.08
SMARCB1-205ENST00000417137 PKNOX2Q96KN3 472 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms