RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 KRT72Q14CN4 511 aa16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 NAA25Q14CX7 972 aa16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 CYP2A13Q16696 494 aa16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 TCTE1Q5JU00 501 aa16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 C1orf189Q5VU69 101 aa16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 LIPJQ5W064 366 aa16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 CDYL2Q8N8U2 506 aa16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 ZUFSPQ96AP4 578 aa16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 OR52B2Q96RD2 323 aa16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 SGPP1Q9BX95 441 aa16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 PCBD2Q9H0N5 130 aa16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 WDR55Q9H6Y2 383 aaPredicted RBP16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 CCDC177Q9NQR7 707 aaPredicted RBP16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 RIC8BQ9NVN3 520 aa16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 DHCR7Q9UBM7 475 aaKnown RBP16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 KCNE2Q9Y6J6 123 aa16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 A0A1B0GTL3 188 aa16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 E7ENX8 843 aa16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 CLGNO14967 610 aa16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 PIP5K1BO14986 540 aa16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 DPM1O60762 260 aa16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 KLF7O75840 302 aaPredicted RBP16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 UBOX5O94941 541 aa16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 KRT6AP02538 564 aa16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 KRT6BP04259 564 aa16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 GNAZP19086 355 aa16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 EPORP19235 508 aa16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 KRT6CP48668 564 aa16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 TAP2Q03519 686 aa16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 BNIP1Q12981 228 aa16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 GRB7Q14451 532 aa16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 IGFBP7Q16270 282 aa16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 NKAIN1Q4KMZ8 207 aa16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 MCATQ8IVS2 390 aaKnown RBP16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 DDIASQ8IXT1 998 aa16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 LRRC56Q8IYG6 542 aaPredicted RBP16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 C2orf73Q8N5S3 287 aaPredicted RBP16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 EFCAB3Q8N7B9 438 aa16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 HMGCLL1Q8TB92 370 aa16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 PYCR2Q96C36 320 aa16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 KCNA7Q96RP8 456 aa16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 HAUS8Q9BT25 410 aa16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 PTRH2Q9Y3E5 179 aaKnown RBP16.1■□□□□ 0.17
SCAMP4-204ENST00000414057 TTLL8A6PVC2 850 aa16.09■□□□□ 0.17
SCAMP4-204ENST00000414057 HCRTR1O43613 425 aa16.09■□□□□ 0.17
SCAMP4-204ENST00000414057 SRPX2O60687 465 aaPredicted RBP16.09■□□□□ 0.17
SCAMP4-204ENST00000414057 PDGFAP04085 211 aa16.09■□□□□ 0.17
SCAMP4-204ENST00000414057 ALAS2P22557 587 aa16.09■□□□□ 0.17
SCAMP4-204ENST00000414057 OTX2P32243 289 aa16.09■□□□□ 0.17
SCAMP4-204ENST00000414057 HNF4AP41235 474 aa16.09■□□□□ 0.17
SCAMP4-204ENST00000414057 CASP2P42575 452 aa16.09■□□□□ 0.17
SCAMP4-204ENST00000414057 TBPL1P62380 186 aa16.09■□□□□ 0.17
SCAMP4-204ENST00000414057 E2F2Q14209 437 aa16.09■□□□□ 0.17
SCAMP4-204ENST00000414057 GRM7Q14831 915 aa16.09■□□□□ 0.17
SCAMP4-204ENST00000414057 XKR7Q5GH72 579 aa16.09■□□□□ 0.17
SCAMP4-204ENST00000414057 C10orf62Q5T681 223 aaPredicted RBP16.09■□□□□ 0.17
SCAMP4-204ENST00000414057 NXNQ6DKJ4 435 aa16.09■□□□□ 0.17
SCAMP4-204ENST00000414057 FIGLAQ6QHK4 219 aa16.09■□□□□ 0.17
SCAMP4-204ENST00000414057 LCTLQ6UWM7 567 aa16.09■□□□□ 0.17
SCAMP4-204ENST00000414057 LARP4Q71RC2 724 aaKnown RBP eCLIP16.09■□□□□ 0.17
SCAMP4-204ENST00000414057 CPSF7Q8N684 471 aaKnown RBP16.09■□□□□ 0.17
SCAMP4-204ENST00000414057 LMNTD1Q8N9Z9 388 aa16.09■□□□□ 0.17
SCAMP4-204ENST00000414057 TTC29Q8NA56 475 aaPredicted RBP16.09■□□□□ 0.17
SCAMP4-204ENST00000414057 CLEC1AQ8NC01 280 aa16.09■□□□□ 0.17
SCAMP4-204ENST00000414057 OR2Y1Q8NGV0 311 aa16.09■□□□□ 0.17
SCAMP4-204ENST00000414057 NACC2Q96BF6 587 aa16.09■□□□□ 0.17
SCAMP4-204ENST00000414057 IL17FQ96PD4 163 aa16.09■□□□□ 0.17
SCAMP4-204ENST00000414057 CDK15Q96Q40 435 aa16.09■□□□□ 0.17
SCAMP4-204ENST00000414057 EHD1Q9H4M9 534 aa16.09■□□□□ 0.17
SCAMP4-204ENST00000414057 GPR83Q9NYM4 423 aa16.09■□□□□ 0.17
SCAMP4-204ENST00000414057 CIDEBQ9UHD4 219 aa16.09■□□□□ 0.17
SCAMP4-204ENST00000414057 SNX6Q9UNH7 406 aa16.09■□□□□ 0.17
SCAMP4-204ENST00000414057 DYRK1BQ9Y463 629 aa16.09■□□□□ 0.17
SCAMP4-204ENST00000414057 E9PBE3 544 aa16.08■□□□□ 0.16
SCAMP4-204ENST00000414057 ULK1O75385 1050 aa16.08■□□□□ 0.16
SCAMP4-204ENST00000414057 NCF2P19878 526 aaPredicted RBP16.08■□□□□ 0.16
SCAMP4-204ENST00000414057 HNRNPH2P55795 449 aaKnown RBP16.08■□□□□ 0.16
SCAMP4-204ENST00000414057 IRF8Q02556 426 aa16.08■□□□□ 0.16
SCAMP4-204ENST00000414057 ATP1A4Q13733 1029 aa16.08■□□□□ 0.16
SCAMP4-204ENST00000414057 FAM214AQ32MH5 1076 aa16.08■□□□□ 0.16
SCAMP4-204ENST00000414057 FAM69BQ5VUD6 431 aa16.08■□□□□ 0.16
SCAMP4-204ENST00000414057 CHSY3Q70JA7 882 aa16.08■□□□□ 0.16
SCAMP4-204ENST00000414057 FAM20CQ8IXL6 584 aa16.08■□□□□ 0.16
SCAMP4-204ENST00000414057 FDCSPQ8NFU4 85 aa16.08■□□□□ 0.16
SCAMP4-204ENST00000414057 SMPDL3AQ92484 453 aa16.08■□□□□ 0.16
SCAMP4-204ENST00000414057 MIB2Q96AX9 1013 aa16.08■□□□□ 0.16
SCAMP4-204ENST00000414057 FKBP10Q96AY3 582 aa16.08■□□□□ 0.16
SCAMP4-204ENST00000414057 PPP1R36Q96LQ0 422 aa16.08■□□□□ 0.16
SCAMP4-204ENST00000414057 CCDC106Q9BWC9 280 aa16.08■□□□□ 0.16
SCAMP4-204ENST00000414057 TUBB1Q9H4B7 451 aa16.08■□□□□ 0.16
SCAMP4-204ENST00000414057 SLC12A4Q9UP95 1085 aa16.08■□□□□ 0.16
SCAMP4-204ENST00000414057 TIMM22Q9Y584 194 aa16.08■□□□□ 0.16
SCAMP4-204ENST00000414057 TENM4Q6N022 2769 aa16.08■□□□□ 0.16
SCAMP4-204ENST00000414057 A0A1B0GX78 115 aa16.07■□□□□ 0.16
SCAMP4-204ENST00000414057 SERTM1A2A2V5 107 aa16.07■□□□□ 0.16
SCAMP4-204ENST00000414057 KRT87PA6NCN2 255 aa16.07■□□□□ 0.16
SCAMP4-204ENST00000414057 CAPN14A8MX76 684 aa16.07■□□□□ 0.16
SCAMP4-204ENST00000414057 UBDO15205 165 aa16.07■□□□□ 0.16
SCAMP4-204ENST00000414057 WFS1O76024 890 aa16.07■□□□□ 0.16
SCAMP4-204ENST00000414057 ALBP02768 609 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms