RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 ADPRMQ3LIE5 342 aa24.71■■□□□ 1.55
VEGFA-207ENST00000413642 HAS2Q92819 552 aa24.71■■□□□ 1.55
VEGFA-207ENST00000413642 PAFAH2Q99487 392 aa24.71■■□□□ 1.55
VEGFA-207ENST00000413642 LPAR4Q99677 370 aa24.71■■□□□ 1.55
VEGFA-207ENST00000413642 BARD1Q99728 777 aaKnown RBP24.71■■□□□ 1.55
VEGFA-207ENST00000413642 NPAS2Q99743 824 aa24.71■■□□□ 1.55
VEGFA-207ENST00000413642 SLC29A3Q9BZD2 475 aa24.71■■□□□ 1.55
VEGFA-207ENST00000413642 REXO4Q9GZR2 422 aaKnown RBP24.71■■□□□ 1.55
VEGFA-207ENST00000413642 KCNK13Q9HB14 408 aa24.71■■□□□ 1.55
VEGFA-207ENST00000413642 STMN3Q9NZ72 180 aa24.71■■□□□ 1.55
VEGFA-207ENST00000413642 OPTCQ9UBM4 332 aa24.71■■□□□ 1.55
VEGFA-207ENST00000413642 NFU1Q9UMS0 254 aa24.71■■□□□ 1.55
VEGFA-207ENST00000413642 SHANK1Q9Y566 2161 aa24.71■■□□□ 1.55
VEGFA-207ENST00000413642 A8MUA0 341 aa24.7■■□□□ 1.54
VEGFA-207ENST00000413642 POC1B-GALNT4F8VUJ3 575 aa24.7■■□□□ 1.54
VEGFA-207ENST00000413642 K7EPI3 171 aa24.7■■□□□ 1.54
VEGFA-207ENST00000413642 PSMD12O00232 456 aaPredicted RBP24.7■■□□□ 1.54
VEGFA-207ENST00000413642 SH3BGRLO75368 114 aa24.7■■□□□ 1.54
VEGFA-207ENST00000413642 MSH2P43246 934 aa24.7■■□□□ 1.54
VEGFA-207ENST00000413642 ACAP2Q15057 778 aa24.7■■□□□ 1.54
VEGFA-207ENST00000413642 TBCCQ15814 346 aa24.7■■□□□ 1.54
VEGFA-207ENST00000413642 PFKFB4Q16877 469 aa24.7■■□□□ 1.54
VEGFA-207ENST00000413642 ABHD17BQ5VST6 288 aa24.7■■□□□ 1.54
VEGFA-207ENST00000413642 QSOX2Q6ZRP7 698 aa24.7■■□□□ 1.54
VEGFA-207ENST00000413642 TEX9Q8N6V9 391 aa24.7■■□□□ 1.54
VEGFA-207ENST00000413642 TMEM52Q8NDY8 209 aa24.7■■□□□ 1.54
VEGFA-207ENST00000413642 OR2L5Q8NG80 312 aa24.7■■□□□ 1.54
VEGFA-207ENST00000413642 RHEBL1Q8TAI7 183 aa24.7■■□□□ 1.54
VEGFA-207ENST00000413642 GRHL3Q8TE85 626 aa24.7■■□□□ 1.54
VEGFA-207ENST00000413642 TSPYL1Q9H0U9 437 aa24.7■■□□□ 1.54
VEGFA-207ENST00000413642 IGKV3D-11A0A0A0MRZ8 115 aa24.69■■□□□ 1.54
VEGFA-207ENST00000413642 SEMA7AO75326 666 aa24.69■■□□□ 1.54
VEGFA-207ENST00000413642 INHBAP08476 426 aa24.69■■□□□ 1.54
VEGFA-207ENST00000413642 CERS1P27544 350 aa24.69■■□□□ 1.54
VEGFA-207ENST00000413642 GSTM2P28161 218 aa24.69■■□□□ 1.54
VEGFA-207ENST00000413642 CASP2P42575 452 aa24.69■■□□□ 1.54
VEGFA-207ENST00000413642 HNRNPFP52597 415 aaKnown RBP24.69■■□□□ 1.54
VEGFA-207ENST00000413642 SLC26A5P58743 744 aa24.69■■□□□ 1.54
VEGFA-207ENST00000413642 LAPTM5Q13571 262 aa24.69■■□□□ 1.54
VEGFA-207ENST00000413642 E2F2Q14209 437 aa24.69■■□□□ 1.54
VEGFA-207ENST00000413642 SETDB1Q15047 1291 aa24.69■■□□□ 1.54
VEGFA-207ENST00000413642 EXT1Q16394 746 aa24.69■■□□□ 1.54
VEGFA-207ENST00000413642 PAGE2BQ5JRK9 111 aa24.69■■□□□ 1.54
VEGFA-207ENST00000413642 ABHD17CQ6PCB6 329 aa24.69■■□□□ 1.54
VEGFA-207ENST00000413642 UBE3DQ7Z6J8 389 aa24.69■■□□□ 1.54
VEGFA-207ENST00000413642 RNF175Q8N4F7 328 aa24.69■■□□□ 1.54
VEGFA-207ENST00000413642 KIF2BQ8N4N8 673 aa24.69■■□□□ 1.54
VEGFA-207ENST00000413642 CEP112Q8N8E3 955 aa24.69■■□□□ 1.54
VEGFA-207ENST00000413642 LRRN4CLQ8ND94 238 aa24.69■■□□□ 1.54
VEGFA-207ENST00000413642 PRR7Q8TB68 274 aa24.69■■□□□ 1.54
VEGFA-207ENST00000413642 M1APQ8TC57 530 aa24.69■■□□□ 1.54
VEGFA-207ENST00000413642 SEC16BQ96JE7 1060 aa24.69■■□□□ 1.54
VEGFA-207ENST00000413642 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP24.69■■□□□ 1.543e-8■■□□□ 12.3
VEGFA-207ENST00000413642 MMP25Q9NPA2 562 aa24.69■■□□□ 1.54
VEGFA-207ENST00000413642 PRDM9Q9NQV7 894 aa24.69■■□□□ 1.54
VEGFA-207ENST00000413642 FLNBO75369 2602 aaKnown RBP24.69■■□□□ 1.54
VEGFA-207ENST00000413642 ASH1LQ9NR48 2969 aaKnown RBP24.69■■□□□ 1.54
VEGFA-207ENST00000413642 SYCE1LA8MT33 242 aa24.68■■□□□ 1.54
VEGFA-207ENST00000413642 PCNAP12004 261 aa24.68■■□□□ 1.54
VEGFA-207ENST00000413642 GFAPP14136 432 aa24.68■■□□□ 1.54
VEGFA-207ENST00000413642 MAGEA12P43365 314 aa24.68■■□□□ 1.54
VEGFA-207ENST00000413642 AP2B1P63010 937 aa24.68■■□□□ 1.54
VEGFA-207ENST00000413642 SRSF11Q05519 484 aaKnown RBP24.68■■□□□ 1.54
VEGFA-207ENST00000413642 HIST2H2ACQ16777 129 aaPredicted RBP24.68■■□□□ 1.54
VEGFA-207ENST00000413642 ACER2Q5QJU3 275 aa24.68■■□□□ 1.54
VEGFA-207ENST00000413642 FHL5Q5TD97 284 aa24.68■■□□□ 1.54
VEGFA-207ENST00000413642 HIST2H2AA3Q6FI13 130 aa24.68■■□□□ 1.54
VEGFA-207ENST00000413642 H3F3CQ6NXT2 135 aa24.68■■□□□ 1.54
VEGFA-207ENST00000413642 CCDC91Q7Z6B0 441 aa24.68■■□□□ 1.54
VEGFA-207ENST00000413642 CRLF3Q8IUI8 442 aa24.68■■□□□ 1.54
VEGFA-207ENST00000413642 BEST3Q8N1M1 668 aa24.68■■□□□ 1.54
VEGFA-207ENST00000413642 ZNF473Q8WTR7 871 aaKnown RBP24.68■■□□□ 1.54
VEGFA-207ENST00000413642 DCAKDQ8WVC6 231 aa24.68■■□□□ 1.54
VEGFA-207ENST00000413642 TRIM44Q96DX7 344 aaPredicted RBP24.68■■□□□ 1.54
VEGFA-207ENST00000413642 PRDM7Q9NQW5 492 aa24.68■■□□□ 1.54
VEGFA-207ENST00000413642 CPSF2Q9P2I0 782 aaKnown RBP24.68■■□□□ 1.54
VEGFA-207ENST00000413642 RELNP78509 3460 aa24.67■■□□□ 1.54
VEGFA-207ENST00000413642 TCRBV16S1A1N1A0A5B0 115 aa24.67■■□□□ 1.54
VEGFA-207ENST00000413642 TGFBR3LH3BV60 316 aa24.67■■□□□ 1.54
VEGFA-207ENST00000413642 RTCAO00442 366 aaKnown RBP24.67■■□□□ 1.54
VEGFA-207ENST00000413642 B3GALT2O43825 422 aa24.67■■□□□ 1.54
VEGFA-207ENST00000413642 KLK8O60259 260 aa24.67■■□□□ 1.54
VEGFA-207ENST00000413642 RHOXF2BP0C7M4 288 aa24.67■■□□□ 1.54
VEGFA-207ENST00000413642 EPB42P16452 691 aa24.67■■□□□ 1.54
VEGFA-207ENST00000413642 RAB38P57729 211 aa24.67■■□□□ 1.54
VEGFA-207ENST00000413642 TECRLQ5HYJ1 363 aa24.67■■□□□ 1.54
VEGFA-207ENST00000413642 MED27Q6P2C8 311 aa24.67■■□□□ 1.54
VEGFA-207ENST00000413642 TRIM40Q6P9F5 258 aa24.67■■□□□ 1.54
VEGFA-207ENST00000413642 FAM47BQ8NA70 645 aa24.67■■□□□ 1.54
VEGFA-207ENST00000413642 CSF3RQ99062 836 aa24.67■■□□□ 1.54
VEGFA-207ENST00000413642 RHOXF2Q9BQY4 288 aa24.67■■□□□ 1.54
VEGFA-207ENST00000413642 NPLQ9BXD5 320 aaPredicted RBP24.67■■□□□ 1.54
VEGFA-207ENST00000413642 MS4A8Q9BY19 250 aa24.67■■□□□ 1.54
VEGFA-207ENST00000413642 PRM3Q9NNZ6 103 aa24.67■■□□□ 1.54
VEGFA-207ENST00000413642 CLDN16Q9Y5I7 305 aa24.67■■□□□ 1.54
VEGFA-207ENST00000413642 TRAV17A0A0B4J275 112 aa24.66■■□□□ 1.54
VEGFA-207ENST00000413642 OR5H15A6NDH6 313 aa24.66■■□□□ 1.54
VEGFA-207ENST00000413642 CYSRT1A8MQ03 144 aa24.66■■□□□ 1.54
VEGFA-207ENST00000413642 SIX3O95343 332 aaPredicted RBP24.66■■□□□ 1.54
VEGFA-207ENST00000413642 TGFB1P01137 390 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms