RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 GADD45GO95257 159 aa16.9■□□□□ 0.3
SDCBP-202ENST00000413219 RPS19P39019 145 aaKnown RBP16.9■□□□□ 0.3
SDCBP-202ENST00000413219 SNRPGP62308 76 aaKnown RBP16.9■□□□□ 0.3
SDCBP-202ENST00000413219 EEF1A2Q05639 463 aaKnown RBP16.9■□□□□ 0.3
SDCBP-202ENST00000413219 COX20Q5RI15 118 aa16.9■□□□□ 0.3
SDCBP-202ENST00000413219 ERAP2Q6P179 960 aa16.9■□□□□ 0.3
SDCBP-202ENST00000413219 FAM92BQ6ZTR7 304 aa16.9■□□□□ 0.3
SDCBP-202ENST00000413219 GATAD2AQ86YP4 633 aa16.9■□□□□ 0.3
SDCBP-202ENST00000413219 APCDD1Q8J025 514 aa16.9■□□□□ 0.3
SDCBP-202ENST00000413219 OXR1Q8N573 874 aa16.9■□□□□ 0.3
SDCBP-202ENST00000413219 CASD1Q96PB1 797 aa16.9■□□□□ 0.3
SDCBP-202ENST00000413219 CNPPD1Q9BV87 410 aa16.9■□□□□ 0.3
SDCBP-202ENST00000413219 BARHL1Q9BZE3 327 aa16.9■□□□□ 0.3
SDCBP-202ENST00000413219 SRRQ9GZT4 340 aa16.9■□□□□ 0.3
SDCBP-202ENST00000413219 SLA2Q9H6Q3 261 aa16.9■□□□□ 0.3
SDCBP-202ENST00000413219 MARCH7Q9H992 704 aa16.9■□□□□ 0.3
SDCBP-202ENST00000413219 SLC6A14Q9UN76 642 aa16.9■□□□□ 0.3
SDCBP-202ENST00000413219 PLXNB3Q9ULL4 1909 aa16.9■□□□□ 0.3
SDCBP-202ENST00000413219 C2orf78A6NCI8 922 aa16.9■□□□□ 0.3
SDCBP-202ENST00000413219 A6NL46 340 aa16.9■□□□□ 0.3
SDCBP-202ENST00000413219 E7EQ34 232 aa16.9■□□□□ 0.3
SDCBP-202ENST00000413219 ZNF670-ZNF695F2Z2N8 137 aa16.9■□□□□ 0.3
SDCBP-202ENST00000413219 AP3D1O14617 1153 aa16.9■□□□□ 0.3
SDCBP-202ENST00000413219 ADAM12O43184 909 aa16.9■□□□□ 0.3
SDCBP-202ENST00000413219 ATP1B2P14415 290 aaPredicted RBP16.9■□□□□ 0.3
SDCBP-202ENST00000413219 RHCEP18577 417 aa16.9■□□□□ 0.3
SDCBP-202ENST00000413219 CST5P28325 142 aaPredicted RBP16.9■□□□□ 0.3
SDCBP-202ENST00000413219 TIA1P31483 386 aaKnown RBP eCLIP16.9■□□□□ 0.39e-7■■■■□ 24
SDCBP-202ENST00000413219 PSPHP78330 225 aa16.9■□□□□ 0.3
SDCBP-202ENST00000413219 TP53BP2Q13625 1128 aa16.9■□□□□ 0.3
SDCBP-202ENST00000413219 ZNF630Q2M218 657 aaPredicted RBP16.9■□□□□ 0.3
SDCBP-202ENST00000413219 TMEM201Q5SNT2 666 aa16.9■□□□□ 0.3
SDCBP-202ENST00000413219 RNLSQ5VYX0 342 aa16.9■□□□□ 0.3
SDCBP-202ENST00000413219 KLHL17Q6TDP4 642 aa16.9■□□□□ 0.3
SDCBP-202ENST00000413219 USP45Q70EL2 814 aa16.9■□□□□ 0.3
SDCBP-202ENST00000413219 NFKBIDQ8NI38 313 aa16.9■□□□□ 0.3
SDCBP-202ENST00000413219 UPF1Q92900 1129 aaKnown RBP eCLIP16.9■□□□□ 0.3
SDCBP-202ENST00000413219 GTPBP3Q969Y2 492 aaKnown RBP16.9■□□□□ 0.3
SDCBP-202ENST00000413219 GDF15Q99988 308 aa16.9■□□□□ 0.3
SDCBP-202ENST00000413219 SH3BP4Q9P0V3 963 aa16.9■□□□□ 0.3
SDCBP-202ENST00000413219 TBC1D14Q9P2M4 693 aa16.9■□□□□ 0.3
SDCBP-202ENST00000413219 MUTYHQ9UIF7 546 aa16.9■□□□□ 0.3
SDCBP-202ENST00000413219 OGDHLQ9ULD0 1010 aa16.9■□□□□ 0.3
SDCBP-202ENST00000413219 DSPPQ9NZW4 1301 aa16.89■□□□□ 0.29
SDCBP-202ENST00000413219 NUP214P35658 2090 aaPredicted RBP16.89■□□□□ 0.29
SDCBP-202ENST00000413219 MEIOCA2RUB1 952 aa16.89■□□□□ 0.29
SDCBP-202ENST00000413219 GLTPD2A6NH11 291 aa16.89■□□□□ 0.29
SDCBP-202ENST00000413219 RGS5O15539 181 aa16.89■□□□□ 0.29
SDCBP-202ENST00000413219 GSTM1P09488 218 aa16.89■□□□□ 0.29
SDCBP-202ENST00000413219 IL7P13232 177 aa16.89■□□□□ 0.29
SDCBP-202ENST00000413219 ITGB7P26010 798 aa16.89■□□□□ 0.29
SDCBP-202ENST00000413219 CNR2P34972 360 aa16.89■□□□□ 0.29
SDCBP-202ENST00000413219 RUNX1T1Q06455 604 aa16.89■□□□□ 0.29
SDCBP-202ENST00000413219 SCN1BQ07699 218 aa16.89■□□□□ 0.29
SDCBP-202ENST00000413219 DMPKQ09013 629 aa16.89■□□□□ 0.29
SDCBP-202ENST00000413219 ASAH1Q13510 395 aa16.89■□□□□ 0.29
SDCBP-202ENST00000413219 SF1Q15637 639 aaKnown RBP16.89■□□□□ 0.29
SDCBP-202ENST00000413219 ZNF79Q15937 498 aa16.89■□□□□ 0.29
SDCBP-202ENST00000413219 TBRG1Q3YBR2 411 aa16.89■□□□□ 0.29
SDCBP-202ENST00000413219 TRIM40Q6P9F5 258 aa16.89■□□□□ 0.29
SDCBP-202ENST00000413219 TAS1R1Q7RTX1 841 aa16.89■□□□□ 0.29
SDCBP-202ENST00000413219 AQP11Q8NBQ7 271 aa16.89■□□□□ 0.29
SDCBP-202ENST00000413219 PSD4Q8NDX1 1056 aa16.89■□□□□ 0.29
SDCBP-202ENST00000413219 GPR151Q8TDV0 419 aa16.89■□□□□ 0.29
SDCBP-202ENST00000413219 VPS35Q96QK1 796 aa16.89■□□□□ 0.29
SDCBP-202ENST00000413219 SGK2Q9HBY8 427 aa16.89■□□□□ 0.29
SDCBP-202ENST00000413219 EXOSC4Q9NPD3 245 aaKnown RBP16.89■□□□□ 0.29
SDCBP-202ENST00000413219 C1GALT1Q9NS00 363 aa16.89■□□□□ 0.29
SDCBP-202ENST00000413219 NDOR1Q9UHB4 597 aa16.89■□□□□ 0.29
SDCBP-202ENST00000413219 STUB1Q9UNE7 303 aa16.89■□□□□ 0.29
SDCBP-202ENST00000413219 FADS2P1A8MWK0 482 aa16.89■□□□□ 0.29
SDCBP-202ENST00000413219 J3KTA2 159 aa16.89■□□□□ 0.29
SDCBP-202ENST00000413219 ZNF821O75541 412 aaPredicted RBP16.89■□□□□ 0.29
SDCBP-202ENST00000413219 ETHE1O95571 254 aa16.89■□□□□ 0.29
SDCBP-202ENST00000413219 C1SP09871 688 aa16.89■□□□□ 0.29
SDCBP-202ENST00000413219 PSMA1P25786 263 aaKnown RBP16.89■□□□□ 0.29
SDCBP-202ENST00000413219 SMAD3P84022 425 aaKnown RBP16.89■□□□□ 0.29
SDCBP-202ENST00000413219 CDK6Q00534 326 aa16.89■□□□□ 0.29
SDCBP-202ENST00000413219 PTSQ03393 145 aa16.89■□□□□ 0.29
SDCBP-202ENST00000413219 CHRNEQ04844 493 aa16.89■□□□□ 0.29
SDCBP-202ENST00000413219 CAMK2BQ13554 666 aa16.89■□□□□ 0.29
SDCBP-202ENST00000413219 NCF4Q15080 339 aa16.89■□□□□ 0.29
SDCBP-202ENST00000413219 ANGPTL8Q6UXH0 198 aa16.89■□□□□ 0.29
SDCBP-202ENST00000413219 SLC30A8Q8IWU4 369 aa16.89■□□□□ 0.29
SDCBP-202ENST00000413219 KLHL6Q8WZ60 621 aa16.89■□□□□ 0.29
SDCBP-202ENST00000413219 ECHDC3Q96DC8 303 aa16.89■□□□□ 0.29
SDCBP-202ENST00000413219 TRMT2BQ96GJ1 504 aaKnown RBP16.89■□□□□ 0.29
SDCBP-202ENST00000413219 SLC35A5Q9BS91 424 aa16.89■□□□□ 0.29
SDCBP-202ENST00000413219 SLC22A4Q9H015 551 aa16.89■□□□□ 0.29
SDCBP-202ENST00000413219 REEP4Q9H6H4 257 aa16.89■□□□□ 0.29
SDCBP-202ENST00000413219 CMAHPQ9Y471 501 aa16.89■□□□□ 0.29
SDCBP-202ENST00000413219 SEC14L5O43304 696 aa16.88■□□□□ 0.29
SDCBP-202ENST00000413219 POU2F1P14859 743 aa16.88■□□□□ 0.29
SDCBP-202ENST00000413219 CRYBB2P43320 205 aa16.88■□□□□ 0.29
SDCBP-202ENST00000413219 PNLIPRP1P54315 467 aa16.88■□□□□ 0.29
SDCBP-202ENST00000413219 PCBP3P57721 371 aaKnown RBP16.88■□□□□ 0.29
SDCBP-202ENST00000413219 HBA1P69905 142 aa16.88■□□□□ 0.29
SDCBP-202ENST00000413219 DOC2BQ14184 412 aa16.88■□□□□ 0.29
SDCBP-202ENST00000413219 BAK1Q16611 211 aa16.88■□□□□ 0.29
SDCBP-202ENST00000413219 ZNF385BQ569K4 471 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms