RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 ZNF25P17030 456 aaPredicted RBP5.04□□□□□ -1.6
HERC4-205ENST00000412272 ELK4P28324 431 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 MAGEA12P43365 314 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 BAG6P46379 1132 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 GLUD2P49448 558 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 ARSEP51690 589 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 NAGLUP54802 743 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 RPS26P62854 115 aaKnown RBP5.04□□□□□ -1.6
HERC4-205ENST00000412272 MSS51Q4VC12 460 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 NHLRC3Q5JS37 347 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 Q5PR19 223 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 IER5Q5VY09 327 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 KCTD11Q693B1 232 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 PRSS57Q6UWY2 283 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 METTL7BQ6UX53 244 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 LRRC8DQ7L1W4 858 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 CHMP1BQ7LBR1 199 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 TRIM48Q8IWZ4 208 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 ZNF444Q8N0Y2 327 aaPredicted RBP5.04□□□□□ -1.6
HERC4-205ENST00000412272 DNAJC22Q8N4W6 341 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 WDR20Q8TBZ3 569 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 SPACA9Q96E40 222 aaPredicted RBP5.04□□□□□ -1.6
HERC4-205ENST00000412272 MRPS24Q96EL2 167 aaKnown RBP5.04□□□□□ -1.6
HERC4-205ENST00000412272 ABHD17AQ96GS6 310 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 CENPNQ96H22 339 aaPredicted RBP5.04□□□□□ -1.6
HERC4-205ENST00000412272 TPD52L3Q96J77 140 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 FAM210BQ96KR6 192 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 CXorf58Q96LI9 332 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 MBOAT7Q96N66 472 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 DPCDQ9BVM2 203 aaPredicted RBP5.04□□□□□ -1.6
HERC4-205ENST00000412272 JAM3Q9BX67 310 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 SLC52A2Q9HAB3 445 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 SMPD3Q9NY59 655 aaPredicted RBP5.04□□□□□ -1.6
HERC4-205ENST00000412272 GPR45Q9Y5Y3 372 aa5.04□□□□□ -1.6
HERC4-205ENST00000412272 ATP6AP2A0A1C7CYW4 349 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 FAM159BA6NKW6 160 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 KCNK1O00180 336 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 HCN1O60741 890 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 PRSS23O95084 383 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 APOC3P02656 99 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 PRKCGP05129 697 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 INHBAP08476 426 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 CTXN2P0C2S0 81 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 UNGP13051 313 aaPredicted RBP5.03□□□□□ -1.6
HERC4-205ENST00000412272 VEGFAP15692 232 aaPredicted RBP5.03□□□□□ -1.6
HERC4-205ENST00000412272 PAX6P26367 422 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 SSTR1P30872 391 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 LCN1P31025 176 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 TGFBR1P36897 503 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 MC3RP41968 323 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 NRIP1P48552 1158 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 NUDT2P50583 147 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 GMFBP60983 142 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 RPS6P62753 249 aaKnown RBP5.03□□□□□ -1.6
HERC4-205ENST00000412272 FGFBP1Q14512 234 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 PCLAFQ15004 111 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 LAPTM4AQ15012 233 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 CHRFAM7AQ494W8 412 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 ATPAF1Q5TC12 328 aaPredicted RBP5.03□□□□□ -1.6
HERC4-205ENST00000412272 OTUD1Q5VV17 481 aaPredicted RBP5.03□□□□□ -1.6
HERC4-205ENST00000412272 DENND5AQ6IQ26 1287 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 FAM185AQ8N0U4 392 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 VWA5B2Q8N398 1253 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 NLGN4YQ8NFZ3 816 aaPredicted RBP5.03□□□□□ -1.6
HERC4-205ENST00000412272 NLGN2Q8NFZ4 835 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 LRR1Q96L50 414 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 CCDC74BQ96LY2 380 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 GAL3ST4Q96RP7 486 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 NPAS2Q99743 824 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 C1QTNF3Q9BXJ4 246 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 DGCR6LQ9BY27 220 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 GLIS2Q9BZE0 524 aaPredicted RBP5.03□□□□□ -1.6
HERC4-205ENST00000412272 SDCBP2Q9H190 292 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 ZFP64Q9NPA5 681 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 IL17RBQ9NRM6 502 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 ADARB2Q9NS39 739 aaKnown RBP5.03□□□□□ -1.6
HERC4-205ENST00000412272 TAS2R3Q9NYW6 316 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 SEC14L3Q9UDX4 400 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 ZNRF3Q9ULT6 936 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.03□□□□□ -1.6
HERC4-205ENST00000412272 GPR89AB7ZAQ6 455 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 M0R3H8 397 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 AOC2O75106 756 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 ICOSLGO75144 302 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 PAPSS2O95340 614 aaPredicted RBP5.03□□□□□ -1.6
HERC4-205ENST00000412272 ONECUT2O95948 504 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 CLTBP09497 229 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 C1SP09871 688 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 GPR89BP0CG08 455 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 STAG3L3P0CL85 134 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 PPP2R1BP30154 601 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 LSM3P62310 102 aaKnown RBP5.03□□□□□ -1.6
HERC4-205ENST00000412272 SRSF11Q05519 484 aaKnown RBP5.03□□□□□ -1.6
HERC4-205ENST00000412272 GPS1Q13098 491 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 P2RY14Q15391 338 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 SLC35G1Q2M3R5 365 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 FASTKD1Q53R41 847 aaKnown RBP5.03□□□□□ -1.6
HERC4-205ENST00000412272 INTS6LQ5JSJ4 861 aaKnown RBP5.03□□□□□ -1.6
HERC4-205ENST00000412272 SYT6Q5T7P8 510 aaPredicted RBP5.03□□□□□ -1.6
HERC4-205ENST00000412272 LCN8Q6JVE9 175 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms