RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 PHLDA2Q53GA4 152 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 PAPPA-AS1Q5QFB9 102 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 ELFN2Q5R3F8 820 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 ANXA8L1Q5VT79 327 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 PRAMEF20Q5VT98 475 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 NKAIN2Q5VXU1 208 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 TTC27Q6P3X3 843 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 Q75L30 129 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 EFL1Q7Z2Z2 1120 aaKnown RBP4.17□□□□□ -1.74
BRCA1-204ENST00000412061 GPR141Q7Z602 305 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 EGFL6Q8IUX8 553 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 IQCF2Q8IXL9 164 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 LGI2Q8N0V4 545 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 GBGT1Q8N5D6 347 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 NPEPL1Q8NDH3 523 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 GPRC5AQ8NFJ5 357 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 OR13J1Q8NGT2 312 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 THAP6Q8TBB0 222 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 ATP8B4Q8TF62 1192 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 CCDC107Q8WV48 283 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 PIGBQ92521 554 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 NT5C3BQ969T7 300 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 NCLNQ969V3 563 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 DHTKD1Q96HY7 919 aaPredicted RBP4.17□□□□□ -1.74
BRCA1-204ENST00000412061 SENP8Q96LD8 212 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 ZNF778Q96MU6 729 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 BTBD9Q96Q07 612 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 NDNQ99608 321 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 SLC25A33Q9BSK2 321 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 C1QTNF7Q9BXJ2 289 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 SPRY4Q9C004 299 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 ACTL8Q9H568 366 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 C10orf88Q9H8K7 445 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 BARHL2Q9NY43 387 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 MRPS33Q9Y291 106 aaKnown RBP4.17□□□□□ -1.74
BRCA1-204ENST00000412061 CHTOPQ9Y3Y2 248 aaKnown RBP4.17□□□□□ -1.74
BRCA1-204ENST00000412061 AP4B1Q9Y6B7 739 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 GOLGA6L7A0A1B0GV03 622 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 HELTA6NFD8 242 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 C17orf105B2RV13 164 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 TMEM178BH3BS89 294 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 CHUKO15111 745 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 NEMFO60524 1076 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 ECI2O75521 394 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 WISP2O76076 250 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 PDE9AO76083 593 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 CPNE6O95741 557 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 IGHEP01854 428 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 ACP2P11117 423 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 CSF2RAP15509 400 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 CEBPBP17676 345 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 ITGB6P18564 788 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 CDH3P22223 829 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 CDC25AP30304 524 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 CA8P35219 290 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 PTGFRP43088 359 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 GLIPR1P48060 266 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 RGS4P49798 205 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 PEX5P50542 639 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 DMPKQ09013 629 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 Q0VFX4 171 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 MSLNQ13421 630 aaPredicted RBP4.16□□□□□ -1.74
BRCA1-204ENST00000412061 BTG3Q14201 252 aaPredicted RBP4.16□□□□□ -1.74
BRCA1-204ENST00000412061 TRIP10Q15642 601 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 AGKQ53H12 422 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 TDRD12Q587J7 1177 aaKnown RBP4.16□□□□□ -1.74
BRCA1-204ENST00000412061 RABGAP1LQ5R372 815 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 ASPHD2Q6ICH7 369 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 ZNF425Q6IV72 752 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 C8orf82Q6P1X6 216 aaPredicted RBP4.16□□□□□ -1.74
BRCA1-204ENST00000412061 LRRC8BQ6P9F7 803 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 CLEC2AQ6UVW9 174 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 ZNF704Q6ZNC4 412 aaPredicted RBP4.16□□□□□ -1.74
BRCA1-204ENST00000412061 FAM131BQ86XD5 332 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 MMD2Q8IY49 270 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 PRR26Q8N8Z3 221 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 FAM184AQ8NB25 1140 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 NEXN-AS1Q8NBZ9 246 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 NOA1Q8NC60 698 aaKnown RBP4.16□□□□□ -1.74
BRCA1-204ENST00000412061 PPFIBP2Q8ND30 876 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 GOLGA5Q8TBA6 731 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 WFIKKN2Q8TEU8 576 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 PHYHIPQ92561 330 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 RAPGEF5Q92565 580 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 MCHR2Q969V1 340 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 FAM84BQ96KN1 310 aaPredicted RBP4.16□□□□□ -1.74
BRCA1-204ENST00000412061 ZNF48Q96MX3 618 aaPredicted RBP4.16□□□□□ -1.74
BRCA1-204ENST00000412061 RBM14Q96PK6 669 aaKnown RBP4.16□□□□□ -1.74
BRCA1-204ENST00000412061 RAB40CQ96S21 281 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 BCL7BQ9BQE9 202 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 CBWD1Q9BRT8 395 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 FAM192AQ9GZU8 254 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 LRMDAQ9H2I8 198 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 EBF3Q9H4W6 596 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 CALHM2Q9HA72 323 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 HPS4Q9NQG7 708 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 DDX28Q9NUL7 540 aaKnown RBP4.16□□□□□ -1.74
BRCA1-204ENST00000412061 ACOXLQ9NUZ1 547 aa4.16□□□□□ -1.74
BRCA1-204ENST00000412061 C6orf203Q9P0P8 240 aaPredicted RBP4.16□□□□□ -1.74
BRCA1-204ENST00000412061 MRPS2Q9Y399 296 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms