RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 SOX30O94993 753 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 RCBTB2O95199 551 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 TNFAIP8O95379 198 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 IFNA6P05013 189 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 GLULP15104 373 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 MRPS35P82673 323 aaKnown RBP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 ZNF33BQ06732 778 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 MED22Q15528 200 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 TGFBIQ15582 683 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 VWA5B1Q5TIE3 1220 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 DUS1LQ6P1R4 473 aaKnown RBP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 GAREM2Q75VX8 874 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 CPNE8Q86YQ8 564 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 CEP97Q8IW35 865 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 ZC3H3Q8IXZ2 948 aaKnown RBP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 GPR137CQ8N3F9 429 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 SDR16C5Q8N3Y7 309 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 ZNF433Q8N7K0 673 aaPredicted RBP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 BBS10Q8TAM1 723 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 ENKURQ8TC29 256 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 PGAP3Q96FM1 320 aaPredicted RBP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 DTD2Q96FN9 168 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 ADAD1Q96M93 576 aaKnown RBP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 PKP4Q99569 1192 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 TIMM29Q9BSF4 260 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 DSN1Q9H410 356 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 REEP4Q9H6H4 257 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 CTPS2Q9NRF8 586 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 DLGAP2Q9P1A6 1054 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 BTBD3Q9Y2F9 522 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.82□□□□□ -1.64
SCN3A-203ENST00000409101 FAM159BA6NKW6 160 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 BLOC1S5-TXNDC5H3BN57 136 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 EIF1AYO14602 144 aaKnown RBP4.82□□□□□ -1.64
SCN3A-203ENST00000409101 ICAM2P13598 275 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 GDF1P27539 372 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 IDH3AP50213 366 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 CDK9P50750 372 aaKnown RBP4.82□□□□□ -1.64
SCN3A-203ENST00000409101 CCL11P51671 97 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 MANEALQ5VSG8 457 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 ARL9Q6T311 187 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 USP30Q70CQ3 517 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 TDRPQ86YL5 185 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 CCDC116Q8IYX3 515 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 NUP43Q8NFH3 380 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 SLC6A18Q96N87 628 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 NPLQ9BXD5 320 aaPredicted RBP4.82□□□□□ -1.64
SCN3A-203ENST00000409101 ZDHHC5Q9C0B5 715 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 CWH43Q9H720 699 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 FAM120CQ9NX05 1096 aaKnown RBP4.82□□□□□ -1.64
SCN3A-203ENST00000409101 CCL26Q9Y258 94 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 GPC6Q9Y625 555 aaPredicted RBP4.82□□□□□ -1.64
SCN3A-203ENST00000409101 PNMA8CA0A1B0GUJ8 204 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 BLACEA4D250 179 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 TRIM64A6NGJ6 449 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 VSTM2BA6NLU5 285 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 ZNF670-ZNF695F2Z2N8 137 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 PDCD5O14737 125 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 PRAMEF2O60811 474 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 BCL10O95999 233 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 CD2P06729 351 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 ALOX12P18054 663 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 CTHP32929 405 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 BMP8BP34820 402 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 OLR1P78380 273 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 CTBSQ01459 385 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 SERTAD2Q14140 314 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 TMPRSS9Q7Z410 1059 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 HSD11B1LQ7Z5J1 315 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 BMP8AQ7Z5Y6 402 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 MCATQ8IVS2 390 aaKnown RBP4.82□□□□□ -1.64
SCN3A-203ENST00000409101 IFI44Q8TCB0 444 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 OR5P2Q8WZ92 322 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 BMFQ96LC9 184 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 HDAC8Q9BY41 377 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 NDUFA13Q9P0J0 144 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 FETUBQ9UGM5 382 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 TMPRSS11EQ9UL52 423 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 WASF3Q9UPY6 502 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 CAMK2AQ9UQM7 478 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 IRAK3Q9Y616 596 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 HS3ST3A1Q9Y663 406 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 STRCQ7RTU9 1775 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 A0A1W2PQ72 361 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 UBE2QL1A1L167 161 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 NPIPB15A6NHN6 443 aaPredicted RBP4.82□□□□□ -1.64
SCN3A-203ENST00000409101 ANXA2P2A6NMY6 339 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 PLD2O14939 933 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 EDF1O60869 148 aaKnown RBP4.82□□□□□ -1.64
SCN3A-203ENST00000409101 CSTAP01040 98 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 ANXA2P07355 339 aaKnown RBP4.82□□□□□ -1.64
SCN3A-203ENST00000409101 MTHFD1P11586 935 aaKnown RBP4.82□□□□□ -1.64
SCN3A-203ENST00000409101 DRD2P14416 443 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 GSTM3P21266 225 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 HOXD9P28356 352 aaPredicted RBP4.82□□□□□ -1.64
SCN3A-203ENST00000409101 CAPGP40121 348 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 RAB25P57735 213 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 EEFSECP57772 596 aaKnown RBP4.82□□□□□ -1.64
SCN3A-203ENST00000409101 EFR3AQ14156 821 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 TRIM25Q14258 630 aaKnown RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms