RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 DCDP81605 110 aaKnown RBP10.02□□□□□ -0.81
RPAIN-204ENST00000405578 ZNF33BQ06732 778 aa10.02□□□□□ -0.81
RPAIN-204ENST00000405578 ABHD18Q0P651 414 aa10.02□□□□□ -0.81
RPAIN-204ENST00000405578 GALNT1Q10472 559 aaPredicted RBP10.02□□□□□ -0.81
RPAIN-204ENST00000405578 TRAF3Q13114 568 aa10.02□□□□□ -0.81
RPAIN-204ENST00000405578 DDX39BQ13838 428 aaKnown RBP10.02□□□□□ -0.81
RPAIN-204ENST00000405578 FAM53BQ14153 422 aa10.02□□□□□ -0.81
RPAIN-204ENST00000405578 MPP2Q14168 576 aa10.02□□□□□ -0.81
RPAIN-204ENST00000405578 RCN2Q14257 317 aa10.02□□□□□ -0.81
RPAIN-204ENST00000405578 CHI3L2Q15782 390 aa10.02□□□□□ -0.81
RPAIN-204ENST00000405578 HKDC1Q2TB90 917 aa10.02□□□□□ -0.81
RPAIN-204ENST00000405578 TMEM35AQ53FP2 167 aa10.02□□□□□ -0.81
RPAIN-204ENST00000405578 RPS27LQ71UM5 84 aaKnown RBP10.02□□□□□ -0.81
RPAIN-204ENST00000405578 VN1R4Q7Z5H5 301 aa10.02□□□□□ -0.81
RPAIN-204ENST00000405578 TICAM1Q8IUC6 712 aa10.02□□□□□ -0.81
RPAIN-204ENST00000405578 AFAP1L2Q8N4X5 818 aa10.02□□□□□ -0.81
RPAIN-204ENST00000405578 EFCAB3Q8N7B9 438 aa10.02□□□□□ -0.81
RPAIN-204ENST00000405578 CDYL2Q8N8U2 506 aa10.02□□□□□ -0.81
RPAIN-204ENST00000405578 ANKRD53Q8N9V6 530 aa10.02□□□□□ -0.81
RPAIN-204ENST00000405578 GALNT6Q8NCL4 622 aa10.02□□□□□ -0.81
RPAIN-204ENST00000405578 HUS1BQ8NHY5 278 aa10.02□□□□□ -0.81
RPAIN-204ENST00000405578 RAB3IL1Q8TBN0 382 aa10.02□□□□□ -0.81
RPAIN-204ENST00000405578 APOBEC4Q8WW27 367 aaKnown RBP10.02□□□□□ -0.81
RPAIN-204ENST00000405578 KIAA1143Q96AT1 154 aaPredicted RBP10.02□□□□□ -0.81
RPAIN-204ENST00000405578 TM4SF19Q96DZ7 209 aa10.02□□□□□ -0.81
RPAIN-204ENST00000405578 CMTM7Q96FZ5 175 aa10.02□□□□□ -0.81
RPAIN-204ENST00000405578 SLC45A3Q96JT2 553 aa10.02□□□□□ -0.81
RPAIN-204ENST00000405578 FAR2Q96K12 515 aa10.02□□□□□ -0.81
RPAIN-204ENST00000405578 ROGDIQ9GZN7 287 aa10.02□□□□□ -0.81
RPAIN-204ENST00000405578 SPNS1Q9H2V7 528 aa10.02□□□□□ -0.81
RPAIN-204ENST00000405578 GPN2Q9H9Y4 310 aaPredicted RBP10.02□□□□□ -0.81
RPAIN-204ENST00000405578 ANKHQ9HCJ1 492 aa10.02□□□□□ -0.81
RPAIN-204ENST00000405578 MLXIPLQ9NP71 852 aa10.02□□□□□ -0.81
RPAIN-204ENST00000405578 PFDN4Q9NQP4 134 aa10.02□□□□□ -0.81
RPAIN-204ENST00000405578 INTS9Q9NV88 658 aaKnown RBP10.02□□□□□ -0.81
RPAIN-204ENST00000405578 ZNF490Q9ULM2 529 aaPredicted RBP10.02□□□□□ -0.81
RPAIN-204ENST00000405578 RUVBL1Q9Y265 456 aaKnown RBP10.02□□□□□ -0.81
RPAIN-204ENST00000405578 TSC22D4Q9Y3Q8 395 aa10.02□□□□□ -0.81
RPAIN-204ENST00000405578 SLC22A7Q9Y694 548 aa10.02□□□□□ -0.81
RPAIN-204ENST00000405578 LRIT2A6NDA9 550 aa10.01□□□□□ -0.81
RPAIN-204ENST00000405578 H3BMH7 237 aa10.01□□□□□ -0.81
RPAIN-204ENST00000405578 K7EM74 188 aa10.01□□□□□ -0.81
RPAIN-204ENST00000405578 MEN1O00255 615 aa10.01□□□□□ -0.81
RPAIN-204ENST00000405578 FOXE1O00358 373 aaPredicted RBP10.01□□□□□ -0.81
RPAIN-204ENST00000405578 FFAR3O14843 346 aa10.01□□□□□ -0.81
RPAIN-204ENST00000405578 GPR42O15529 346 aa10.01□□□□□ -0.81
RPAIN-204ENST00000405578 PRAMEF4O60810 478 aa10.01□□□□□ -0.81
RPAIN-204ENST00000405578 OR4F21O95013 312 aa10.01□□□□□ -0.81
RPAIN-204ENST00000405578 TIAF1O95411 115 aa10.01□□□□□ -0.81
RPAIN-204ENST00000405578 CAPN1P07384 714 aa10.01□□□□□ -0.81
RPAIN-204ENST00000405578 UROSP10746 265 aa10.01□□□□□ -0.81
RPAIN-204ENST00000405578 ALOX12P18054 663 aa10.01□□□□□ -0.81
RPAIN-204ENST00000405578 CD22P20273 847 aa10.01□□□□□ -0.81
RPAIN-204ENST00000405578 RAP1GDS1P52306 607 aa10.01□□□□□ -0.81
RPAIN-204ENST00000405578 STX3Q13277 289 aa10.01□□□□□ -0.81
RPAIN-204ENST00000405578 SGO1Q5FBB7 561 aa10.01□□□□□ -0.81
RPAIN-204ENST00000405578 ARL13AQ5H913 290 aaPredicted RBP10.01□□□□□ -0.81
RPAIN-204ENST00000405578 PRAMEF9Q5VWM5 478 aa10.01□□□□□ -0.81
RPAIN-204ENST00000405578 TMEM214Q6NUQ4 689 aaKnown RBP10.01□□□□□ -0.81
RPAIN-204ENST00000405578 LETMD1Q6P1Q0 360 aa10.01□□□□□ -0.81
RPAIN-204ENST00000405578 TRIM40Q6P9F5 258 aa10.01□□□□□ -0.81
RPAIN-204ENST00000405578 ZCCHC23Q6ZST2 131 aa10.01□□□□□ -0.81
RPAIN-204ENST00000405578 SYVN1Q86TM6 617 aa10.01□□□□□ -0.81
RPAIN-204ENST00000405578 CUZD1Q86UP6 607 aa10.01□□□□□ -0.81
RPAIN-204ENST00000405578 GBP7Q8N8V2 638 aaPredicted RBP10.01□□□□□ -0.81
RPAIN-204ENST00000405578 GALNT11Q8NCW6 608 aa10.01□□□□□ -0.81
RPAIN-204ENST00000405578 AGAP11Q8TF27 550 aa10.01□□□□□ -0.81
RPAIN-204ENST00000405578 ZNF473Q8WTR7 871 aaKnown RBP10.01□□□□□ -0.81
RPAIN-204ENST00000405578 SELENOMQ8WWX9 145 aa10.01□□□□□ -0.81
RPAIN-204ENST00000405578 MR1Q95460 341 aa10.01□□□□□ -0.81
RPAIN-204ENST00000405578 GAL3ST3Q96A11 431 aa10.01□□□□□ -0.81
RPAIN-204ENST00000405578 MTERF1Q99551 399 aaKnown RBP10.01□□□□□ -0.81
RPAIN-204ENST00000405578 SERPINI1Q99574 410 aa10.01□□□□□ -0.81
RPAIN-204ENST00000405578 EFHD1Q9BUP0 239 aa10.01□□□□□ -0.81
RPAIN-204ENST00000405578 REXO4Q9GZR2 422 aaKnown RBP10.01□□□□□ -0.81
RPAIN-204ENST00000405578 COPS7BQ9H9Q2 264 aaPredicted RBP10.01□□□□□ -0.81
RPAIN-204ENST00000405578 ACSS2Q9NR19 701 aa10.01□□□□□ -0.81
RPAIN-204ENST00000405578 PSD3Q9NYI0 1048 aa10.01□□□□□ -0.81
RPAIN-204ENST00000405578 AHSPQ9NZD4 102 aa10.01□□□□□ -0.81
RPAIN-204ENST00000405578 IFT80Q9P2H3 777 aaPredicted RBP10.01□□□□□ -0.81
RPAIN-204ENST00000405578 GPN3Q9UHW5 284 aaPredicted RBP10.01□□□□□ -0.81
RPAIN-204ENST00000405578 OTOGQ6ZRI0 2925 aa10□□□□□ -0.81
RPAIN-204ENST00000405578 PRRC2CQ9Y520 2896 aaKnown RBP10□□□□□ -0.81
RPAIN-204ENST00000405578 H0YIG0 161 aa10□□□□□ -0.81
RPAIN-204ENST00000405578 PPP6CO00743 305 aa10□□□□□ -0.81
RPAIN-204ENST00000405578 AZIN1O14977 448 aa10□□□□□ -0.81
RPAIN-204ENST00000405578 P2RX6O15547 441 aa10□□□□□ -0.81
RPAIN-204ENST00000405578 DLGAP3O95886 979 aa10□□□□□ -0.81
RPAIN-204ENST00000405578 TGFB1P01137 390 aa10□□□□□ -0.81
RPAIN-204ENST00000405578 STATHP02808 62 aa10□□□□□ -0.81
RPAIN-204ENST00000405578 CTSBP07858 339 aa10□□□□□ -0.81
RPAIN-204ENST00000405578 HSD3B1P14060 373 aa10□□□□□ -0.81
RPAIN-204ENST00000405578 CHN1P15882 459 aa10□□□□□ -0.81
RPAIN-204ENST00000405578 ZNF28P17035 718 aa10□□□□□ -0.81
RPAIN-204ENST00000405578 BGNP21810 368 aa10□□□□□ -0.81
RPAIN-204ENST00000405578 HSD3B2P26439 372 aa10□□□□□ -0.81
RPAIN-204ENST00000405578 WDR4P57081 412 aaKnown RBP10□□□□□ -0.81
RPAIN-204ENST00000405578 ABCE1P61221 599 aaKnown RBP10□□□□□ -0.81
RPAIN-204ENST00000405578 RPS15P62841 145 aaKnown RBP10□□□□□ -0.81
RPAIN-204ENST00000405578 NKAIN1Q4KMZ8 207 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms