RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 CDK6Q00534 326 aa8.8□□□□□ -1
HPS4-203ENST00000402105 MGAT3Q09327 533 aa8.8□□□□□ -1
HPS4-203ENST00000402105 VEPH1Q14D04 833 aa8.8□□□□□ -1
HPS4-203ENST00000402105 MICAQ29983 383 aa8.8□□□□□ -1
HPS4-203ENST00000402105 TIMM50Q3ZCQ8 353 aa8.8□□□□□ -1
HPS4-203ENST00000402105 GCNT6Q5T4J0 391 aa8.8□□□□□ -1
HPS4-203ENST00000402105 LYPD8Q6UX82 237 aa8.8□□□□□ -1
HPS4-203ENST00000402105 NLRP8Q86W28 1048 aa8.8□□□□□ -1
HPS4-203ENST00000402105 GHDCQ8N2G8 530 aa8.8□□□□□ -1
HPS4-203ENST00000402105 ELMOD1Q8N336 334 aa8.8□□□□□ -1
HPS4-203ENST00000402105 HUS1BQ8NHY5 278 aa8.8□□□□□ -1
HPS4-203ENST00000402105 PHF21AQ96BD5 680 aa8.8□□□□□ -1
HPS4-203ENST00000402105 MTG2Q9H4K7 406 aa8.8□□□□□ -1
HPS4-203ENST00000402105 CCDC177Q9NQR7 707 aaPredicted RBP8.8□□□□□ -1
HPS4-203ENST00000402105 SSR3Q9UNL2 185 aa8.8□□□□□ -1
HPS4-203ENST00000402105 RUVBL1Q9Y265 456 aaKnown RBP8.8□□□□□ -1
HPS4-203ENST00000402105 POFUT2Q9Y2G5 429 aa8.8□□□□□ -1
HPS4-203ENST00000402105 SPIN1Q9Y657 262 aaPredicted RBP8.8□□□□□ -1
HPS4-203ENST00000402105 CFAP20Q9Y6A4 193 aaKnown RBP8.8□□□□□ -1
HPS4-203ENST00000402105 A0A1W2PQL4 384 aaPredicted RBP8.8□□□□□ -1
HPS4-203ENST00000402105 GSAPA4D1B5 854 aa8.8□□□□□ -1
HPS4-203ENST00000402105 H3BQ06 376 aaPredicted RBP8.8□□□□□ -1
HPS4-203ENST00000402105 PLK4O00444 970 aa8.8□□□□□ -1
HPS4-203ENST00000402105 ZNF197O14709 1029 aa8.8□□□□□ -1
HPS4-203ENST00000402105 PLD2O14939 933 aa8.8□□□□□ -1
HPS4-203ENST00000402105 IL7P13232 177 aa8.8□□□□□ -1
HPS4-203ENST00000402105 CD22P20273 847 aa8.8□□□□□ -1
HPS4-203ENST00000402105 TIE1P35590 1138 aa8.8□□□□□ -1
HPS4-203ENST00000402105 HTR2BP41595 481 aa8.8□□□□□ -1
HPS4-203ENST00000402105 RORCP51449 518 aa8.8□□□□□ -1
HPS4-203ENST00000402105 PRKCDQ05655 676 aa8.8□□□□□ -1
HPS4-203ENST00000402105 TARDBPQ13148 414 aaKnown RBP eCLIP8.8□□□□□ -1
HPS4-203ENST00000402105 C5orf22Q49AR2 442 aa8.8□□□□□ -1
HPS4-203ENST00000402105 FAHD1Q6P587 224 aa8.8□□□□□ -1
HPS4-203ENST00000402105 TP53I13Q8NBR0 393 aaPredicted RBP8.8□□□□□ -1
HPS4-203ENST00000402105 C19orf18Q8NEA5 215 aa8.8□□□□□ -1
HPS4-203ENST00000402105 PCNPQ8WW12 178 aaKnown RBP8.8□□□□□ -1
HPS4-203ENST00000402105 TMEM159Q96B96 161 aa8.8□□□□□ -1
HPS4-203ENST00000402105 TESCQ96BS2 214 aa8.8□□□□□ -1
HPS4-203ENST00000402105 PPCDCQ96CD2 204 aa8.8□□□□□ -1
HPS4-203ENST00000402105 OR2B2Q9GZK3 357 aa8.8□□□□□ -1
HPS4-203ENST00000402105 ZDHHC3Q9NYG2 299 aa8.8□□□□□ -1
HPS4-203ENST00000402105 TBC1D24Q9ULP9 559 aa8.8□□□□□ -1
HPS4-203ENST00000402105 CLEC4AQ9UMR7 237 aa8.8□□□□□ -1
HPS4-203ENST00000402105 MAN2B2Q9Y2E5 1009 aa8.8□□□□□ -1
HPS4-203ENST00000402105 TANC1Q9C0D5 1861 aa8.8□□□□□ -1
HPS4-203ENST00000402105 FADS2P1A8MWK0 482 aa8.79□□□□□ -1
HPS4-203ENST00000402105 PLOD3O60568 738 aa8.79□□□□□ -1
HPS4-203ENST00000402105 IGSF6O95976 241 aa8.79□□□□□ -1
HPS4-203ENST00000402105 BCHEP06276 602 aa8.79□□□□□ -1
HPS4-203ENST00000402105 ATXN8OSP0DMR3 200 aa8.79□□□□□ -1
HPS4-203ENST00000402105 CKBP12277 381 aa8.79□□□□□ -1
HPS4-203ENST00000402105 CHMP24386 653 aa8.79□□□□□ -1
HPS4-203ENST00000402105 ACVR2AP27037 513 aa8.79□□□□□ -1
HPS4-203ENST00000402105 IL12RB1P42701 662 aa8.79□□□□□ -1
HPS4-203ENST00000402105 MAGEA11P43364 429 aa8.79□□□□□ -1
HPS4-203ENST00000402105 TAS2R50P59544 299 aa8.79□□□□□ -1
HPS4-203ENST00000402105 HSPB3Q12988 150 aa8.79□□□□□ -1
HPS4-203ENST00000402105 SPHARQ15513 63 aa8.79□□□□□ -1
HPS4-203ENST00000402105 DUSP7Q16829 419 aa8.79□□□□□ -1
HPS4-203ENST00000402105 ZNF57Q68EA5 555 aaPredicted RBP8.79□□□□□ -1
HPS4-203ENST00000402105 B3GLCTQ6Y288 498 aa8.79□□□□□ -1
HPS4-203ENST00000402105 Q6ZVL8 140 aa8.79□□□□□ -1
HPS4-203ENST00000402105 RBM45Q8IUH3 476 aaKnown RBP8.79□□□□□ -1
HPS4-203ENST00000402105 CMTM8Q8IZV2 173 aa8.79□□□□□ -1
HPS4-203ENST00000402105 FBLIM1Q8WUP2 373 aa8.79□□□□□ -1
HPS4-203ENST00000402105 TMCO6Q96DC7 493 aa8.79□□□□□ -1
HPS4-203ENST00000402105 SAMD11Q96NU1 681 aa8.79□□□□□ -1
HPS4-203ENST00000402105 COQ7Q99807 217 aa8.79□□□□□ -1
HPS4-203ENST00000402105 TBC1D17Q9HA65 648 aa8.79□□□□□ -1
HPS4-203ENST00000402105 NMNAT1Q9HAN9 279 aaPredicted RBP8.79□□□□□ -1
HPS4-203ENST00000402105 TRPC4Q9UBN4 977 aa8.79□□□□□ -1
HPS4-203ENST00000402105 ERVW-1Q9UQF0 538 aa8.79□□□□□ -1
HPS4-203ENST00000402105 GPR52Q9Y2T5 361 aa8.79□□□□□ -1
HPS4-203ENST00000402105 TNS1Q9HBL0 1735 aaKnown RBP8.79□□□□□ -1
HPS4-203ENST00000402105 TLR4O00206 839 aa8.79□□□□□ -1
HPS4-203ENST00000402105 RTCAO00442 366 aaKnown RBP8.79□□□□□ -1
HPS4-203ENST00000402105 SYN3O14994 580 aa8.79□□□□□ -1
HPS4-203ENST00000402105 VNN2O95498 520 aa8.79□□□□□ -1
HPS4-203ENST00000402105 SLC16A8O95907 504 aa8.79□□□□□ -1
HPS4-203ENST00000402105 EIF2S1P05198 315 aaKnown RBP8.79□□□□□ -1
HPS4-203ENST00000402105 HOXD11P31277 338 aaPredicted RBP8.79□□□□□ -1
HPS4-203ENST00000402105 CD70P32970 193 aa8.79□□□□□ -1
HPS4-203ENST00000402105 UGT2B10P36537 528 aa8.79□□□□□ -1
HPS4-203ENST00000402105 CRYBA2P53672 197 aa8.79□□□□□ -1
HPS4-203ENST00000402105 B4GALNT1Q00973 533 aa8.79□□□□□ -1
HPS4-203ENST00000402105 ALDH6A1Q02252 535 aaKnown RBP8.79□□□□□ -1
HPS4-203ENST00000402105 SCN1BQ07699 218 aa8.79□□□□□ -1
HPS4-203ENST00000402105 DOC2BQ14184 412 aa8.79□□□□□ -1
HPS4-203ENST00000402105 SLC5A12Q1EHB4 618 aa8.79□□□□□ -1
HPS4-203ENST00000402105 CRTC2Q53ET0 693 aaPredicted RBP8.79□□□□□ -1
HPS4-203ENST00000402105 ZNF385BQ569K4 471 aa8.79□□□□□ -1
HPS4-203ENST00000402105 TUBA3EQ6PEY2 450 aa8.79□□□□□ -1
HPS4-203ENST00000402105 AGTRAPQ6RW13 159 aa8.79□□□□□ -1
HPS4-203ENST00000402105 ZNF438Q7Z4V0 828 aa8.79□□□□□ -1
HPS4-203ENST00000402105 TMCO2Q7Z6W1 182 aaPredicted RBP8.79□□□□□ -1
HPS4-203ENST00000402105 UBQLNLQ8IYU4 475 aa8.79□□□□□ -1
HPS4-203ENST00000402105 SYT14Q8NB59 555 aa8.79□□□□□ -1
HPS4-203ENST00000402105 GATAD2BQ8WXI9 593 aa8.79□□□□□ -1
HPS4-203ENST00000402105 TM9SF2Q99805 663 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms