RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 IFI30P13284 250 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 ZNF19P17023 458 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 PDHA2P29803 388 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 RPS3AP61247 264 aaKnown RBP11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 RPS21P63220 83 aaKnown RBP11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 PON2Q15165 354 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 DEFB110Q30KQ9 67 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 FAM214AQ32MH5 1076 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 NOXRED1Q6NXP6 359 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 AQP12AQ8IXF9 295 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 OR52E4Q8NGH9 312 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 BIRC7Q96CA5 298 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 HSH2DQ96JZ2 352 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 WDR92Q96MX6 357 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 VRTNQ9H8Y1 702 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 ZIM2Q9NZV7 527 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 APOBEC3BQ9UH17 382 aaKnown RBP11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 WASH3PC4AMC7 463 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 HCRTR2O43614 444 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 SCO2O43819 266 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 SOCS5O75159 536 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 OAZ2O95190 189 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 MATN1P21941 496 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 MAP3K8P41279 467 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 GMFBP60983 142 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 RPL26P61254 145 aaKnown RBP11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 NFE2L1Q14494 772 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 SMCO1Q147U7 214 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 TIGD6Q17RP2 521 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 ZNF101Q8IZC7 436 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 JAGN1Q8N5M9 183 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 ZNF527Q8NB42 609 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 OR8K3Q8NH51 312 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 ASB9Q96DX5 294 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 SOX17Q9H6I2 414 aaPredicted RBP11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 NLGN3Q9NZ94 848 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 FABP12A6NFH5 140 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 ZNF208O43345 1280 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 H6PDO95479 791 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 OR3A3P47888 321 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 OR3A2P47893 321 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 C1orf189Q5VU69 101 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 ZNF613Q6PF04 617 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 B3GNT9Q6UX72 402 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 ASRGL1Q7L266 308 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 KBTBD6Q86V97 674 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 ARMC10Q8N2F6 343 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 CCDC54Q8NEL0 328 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 BORCS5Q969J3 196 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 LRCH3Q96II8 777 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 MCHR1Q99705 422 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 BARD1Q99728 777 aaKnown RBP11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 CHIAQ9BZP6 476 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 MAGEE1Q9HCI5 957 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 GJD2Q9UKL4 321 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 SMCHD1A6NHR9 2005 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 LOC100509620A0A075B734 347 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 DFNA5O60443 496 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 HMGN1P05114 100 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 C6P13671 934 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 ACSL1P33121 698 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 ZNF763Q0D2J5 394 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 FBXO42Q6P3S6 717 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 ULK3Q6PHR2 472 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 LINGO2Q7L985 606 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 TCEANCQ8N8B7 351 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 OR4K14Q8NGD5 310 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 GEMIN6Q8WXD5 167 aaKnown RBP11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 ZBTB20Q9HC78 741 aaPredicted RBP11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 TRNAU1APQ9NX07 287 aaKnown RBP11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 DNAJC27Q9NZQ0 273 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 TNFRSF10DQ9UBN6 386 aa11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 RPL36Q9Y3U8 105 aaKnown RBP11.12□□□□□ -0.63
PCDHGA8-201ENST00000398604 RGPD3A6NKT7 1758 aaPredicted RBP11.11□□□□□ -0.63
PCDHGA8-201ENST00000398604 RGPD4Q7Z3J3 1758 aa11.11□□□□□ -0.63
PCDHGA8-201ENST00000398604 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.11□□□□□ -0.63
PCDHGA8-201ENST00000398604 A0A1W2PQ72 361 aa11.11□□□□□ -0.63
PCDHGA8-201ENST00000398604 SMAD9O15198 467 aaKnown RBP11.11□□□□□ -0.63
PCDHGA8-201ENST00000398604 SMAD6O43541 496 aaKnown RBP11.11□□□□□ -0.63
PCDHGA8-201ENST00000398604 S1PR4O95977 384 aa11.11□□□□□ -0.63
PCDHGA8-201ENST00000398604 DNAJA1P31689 397 aaKnown RBP11.11□□□□□ -0.63
PCDHGA8-201ENST00000398604 PDX1P52945 283 aa11.11□□□□□ -0.63
PCDHGA8-201ENST00000398604 SIM1P81133 766 aaPredicted RBP11.11□□□□□ -0.63
PCDHGA8-201ENST00000398604 ZNF252P-AS1Q0IIN9 211 aa11.11□□□□□ -0.63
PCDHGA8-201ENST00000398604 ABHD18Q0P651 414 aa11.11□□□□□ -0.63
PCDHGA8-201ENST00000398604 CLLU1OSQ5K130 101 aa11.11□□□□□ -0.63
PCDHGA8-201ENST00000398604 C15orf39Q6ZRI6 1047 aa11.11□□□□□ -0.63
PCDHGA8-201ENST00000398604 ZNF627Q7L945 461 aa11.11□□□□□ -0.63
PCDHGA8-201ENST00000398604 SLC15A3Q8IY34 581 aa11.11□□□□□ -0.63
PCDHGA8-201ENST00000398604 UBQLNLQ8IYU4 475 aa11.11□□□□□ -0.63
PCDHGA8-201ENST00000398604 EZH1Q92800 747 aaPredicted RBP11.11□□□□□ -0.63
PCDHGA8-201ENST00000398604 UFD1Q92890 307 aa11.11□□□□□ -0.63
PCDHGA8-201ENST00000398604 SLC2A13Q96QE2 648 aa11.11□□□□□ -0.63
PCDHGA8-201ENST00000398604 ALPK1Q96QP1 1244 aa11.11□□□□□ -0.63
PCDHGA8-201ENST00000398604 CITED4Q96RK1 184 aa11.11□□□□□ -0.63
PCDHGA8-201ENST00000398604 ARHGAP9Q9BRR9 750 aa11.11□□□□□ -0.63
PCDHGA8-201ENST00000398604 SPATA9Q9BWV2 254 aa11.11□□□□□ -0.63
PCDHGA8-201ENST00000398604 SFXN1Q9H9B4 322 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms