RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 NRROSQ86YC3 692 aa13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 RAB43Q86YS6 212 aa13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 KLHL36Q8N4N3 616 aa13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 CAPSLQ8WWF8 208 aa13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 PHF12Q96QT6 1004 aa13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 ITPAQ9BY32 194 aa13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 CAPN14A8MX76 684 aa13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 HHLA1C9JL84 531 aa13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 GNB5O14775 395 aa13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 MAGEB3O15480 346 aa13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 CTSOP43234 321 aaPredicted RBP13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 TYSND1Q2T9J0 566 aa13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 FBXO27Q8NI29 283 aa13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 PMEPA1Q969W9 287 aa13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 BHLHE41Q9C0J9 482 aaPredicted RBP13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 DCSTAMPQ9H295 470 aa13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 RDH14Q9HBH5 336 aa13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 HCFC1R1Q9NWW0 138 aa13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 STOX2Q9P2F5 926 aaPredicted RBP13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 PCDHGB1Q9Y5G3 927 aa13.69□□□□□ -0.22
PCDHGA11-201ENST00000398587 IDH3BO43837 385 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 TYRP1P17643 537 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 HOXD9P28356 352 aaPredicted RBP13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 CCKBRP32239 447 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 ARRB1P49407 418 aaPredicted RBP13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 C5orf22Q49AR2 442 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 SHQ1Q6PI26 577 aaKnown RBP13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 CCDC116Q8IYX3 515 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 BBS10Q8TAM1 723 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 RIT1Q92963 219 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 F2RL3Q96RI0 385 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 DPH7Q9BTV6 452 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 PNO1Q9NRX1 252 aaKnown RBP13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 ING3Q9NXR8 418 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 PHIPQ8WWQ0 1821 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 UGDHO60701 494 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 INMTO95050 263 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 ACVR2AP27037 513 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 ARF5P84085 180 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 RPA4Q13156 261 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 TRAM2Q15035 370 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 AKAP14Q86UN6 197 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 OR6K6Q8NGW6 343 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 ATOH8Q96SQ7 321 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 CNOT11Q9UKZ1 510 aaKnown RBP13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 ING4Q9UNL4 249 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 URB1O60287 2271 aaKnown RBP13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 STRCQ7RTU9 1775 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 C2orf74A8MZ97 194 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 TAF4O00268 1085 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 AKAP8O43823 692 aaKnown RBP13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 B4GALT2O60909 372 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 KCNJ13O60928 360 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 KCNA5P22460 613 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 OR1E2P47887 323 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 NRG3P56975 720 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 NADSYN1Q6IA69 706 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 ASPGQ86U10 573 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 TSEN15Q8WW01 171 aaKnown RBP13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 TP53INP1Q96A56 240 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 EFHD2Q96C19 240 aaPredicted RBP13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 NDC1Q9BTX1 674 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 MTG2Q9H4K7 406 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 PCDHGA7Q9Y5G6 932 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 SCN9AQ15858 1988 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 BTN3A3O00478 584 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 TNFRSF10BO14763 440 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 HOXC13P31276 330 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 RORCP51449 518 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 FAM189BP81408 668 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 NFE2L1Q14494 772 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 TMEM35AQ53FP2 167 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 ADNP2Q6IQ32 1131 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 MRPL43Q8N983 215 aaKnown RBP13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 ACVR1CQ8NER5 493 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 CLEC4AQ9UMR7 237 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 MED31Q9Y3C7 131 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 STON1Q9Y6Q2 735 aa13.68□□□□□ -0.22
PCDHGA11-201ENST00000398587 A0A0U1RQS6 177 aa13.67□□□□□ -0.22
PCDHGA11-201ENST00000398587 H0YC42 278 aa13.67□□□□□ -0.22
PCDHGA11-201ENST00000398587 TLX2O43763 284 aaPredicted RBP13.67□□□□□ -0.22
PCDHGA11-201ENST00000398587 AHCYP23526 432 aa13.67□□□□□ -0.22
PCDHGA11-201ENST00000398587 RAB28P51157 221 aa13.67□□□□□ -0.22
PCDHGA11-201ENST00000398587 BNIP3Q12983 259 aa13.67□□□□□ -0.22
PCDHGA11-201ENST00000398587 GRHL2Q6ISB3 625 aa13.67□□□□□ -0.22
PCDHGA11-201ENST00000398587 ZCCHC12Q6PEW1 402 aa13.67□□□□□ -0.22
PCDHGA11-201ENST00000398587 CLIP4Q8N3C7 705 aa13.67□□□□□ -0.22
PCDHGA11-201ENST00000398587 OR52E4Q8NGH9 312 aa13.67□□□□□ -0.22
PCDHGA11-201ENST00000398587 GRHL3Q8TE85 626 aa13.67□□□□□ -0.22
PCDHGA11-201ENST00000398587 TSSK6Q9BXA6 273 aa13.67□□□□□ -0.22
PCDHGA11-201ENST00000398587 ACTL8Q9H568 366 aa13.67□□□□□ -0.22
PCDHGA11-201ENST00000398587 MAGIXQ9H6Y5 334 aa13.67□□□□□ -0.22
PCDHGA11-201ENST00000398587 TNFRSF10DQ9UBN6 386 aa13.67□□□□□ -0.22
PCDHGA11-201ENST00000398587 LIPT1Q9Y234 373 aa13.67□□□□□ -0.22
PCDHGA11-201ENST00000398587 BCORQ6W2J9 1755 aa13.67□□□□□ -0.22
PCDHGA11-201ENST00000398587 GRXCR2A6NFK2 248 aa13.67□□□□□ -0.22
PCDHGA11-201ENST00000398587 ACOX3O15254 700 aa13.67□□□□□ -0.22
PCDHGA11-201ENST00000398587 MID1O15344 667 aa13.67□□□□□ -0.22
PCDHGA11-201ENST00000398587 LDOC1O95751 146 aaPredicted RBP13.67□□□□□ -0.22
PCDHGA11-201ENST00000398587 DRD2P14416 443 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms