RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 FOXL2P58012 376 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 ABCE1P61221 599 aaKnown RBP16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 RPS18P62269 152 aaKnown RBP16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 SKP1P63208 163 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 OLR1P78380 273 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 TLE3Q04726 772 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 SH2D4BQ5SQS7 431 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 FAM69BQ5VUD6 431 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 KANK2Q63ZY3 851 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 NIPAL1Q6NVV3 410 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 AGR3Q8TD06 166 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 FAR2Q96K12 515 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 KCNC2Q96PR1 638 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 SERPINI1Q99574 410 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 SLC26A1Q9H2B4 701 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 TRPC4Q9UBN4 977 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 GPN3Q9UHW5 284 aaPredicted RBP16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 ZMIZ1Q9ULJ6 1067 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 PCDHGA6Q9Y5G7 932 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 MRPS18BQ9Y676 258 aaKnown RBP16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 IGLV3-12A0A075B6K2 115 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 HSPA4LO95757 839 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 ALBP02768 609 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 FGF4P08620 206 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 NR1D1P20393 614 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 ITPKBP27987 946 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 PTPN4P29074 926 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 SLC1A6P48664 564 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 RPS15P62841 145 aaKnown RBP16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 TGM3Q08188 693 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 BST1Q10588 318 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 CSTF3Q12996 717 aaKnown RBP16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 STX3Q13277 289 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 NKG7Q16617 165 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 HSP90B2PQ58FF3 399 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 SCIMPQ6UWF3 145 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 ZNF793Q6ZN11 406 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 LRRC69Q6ZNQ3 347 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 TMEM151BQ8IW70 566 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 SRFBP1Q8NEF9 429 aaKnown RBP16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 CCNL2Q96S94 520 aaPredicted RBP16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 SORT1Q99523 831 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 CENPKQ9BS16 269 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 TBCDQ9BTW9 1192 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 SORBS1Q9BX66 1292 aaKnown RBP16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 ZNF717Q9BY31 904 aaPredicted RBP16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 ACPTQ9BZG2 426 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 ACTL8Q9H568 366 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 MED4Q9NPJ6 270 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 ZNF282Q9UDV7 671 aaPredicted RBP16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 ZDHHC2Q9UIJ5 367 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 KCND3Q9UK17 655 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 FARSAQ9Y285 508 aaKnown RBP16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 FIS1Q9Y3D6 152 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 TRAF6Q9Y4K3 522 aa16.43■□□□□ 0.22
CSNK1D-204ENST00000398519 A0A088AWK7 358 aa16.42■□□□□ 0.22
CSNK1D-204ENST00000398519 VSTM2BA6NLU5 285 aa16.42■□□□□ 0.22
CSNK1D-204ENST00000398519 EFSO43281 561 aa16.42■□□□□ 0.22
CSNK1D-204ENST00000398519 KLF7O75840 302 aaPredicted RBP16.42■□□□□ 0.22
CSNK1D-204ENST00000398519 SEMA3DO95025 777 aa16.42■□□□□ 0.22
CSNK1D-204ENST00000398519 HSD3B1P14060 373 aa16.42■□□□□ 0.22
CSNK1D-204ENST00000398519 ZNF10P21506 573 aaPredicted RBP16.42■□□□□ 0.22
CSNK1D-204ENST00000398519 HSD3B2P26439 372 aa16.42■□□□□ 0.22
CSNK1D-204ENST00000398519 CERS1P27544 350 aa16.42■□□□□ 0.22
CSNK1D-204ENST00000398519 RAP1GDS1P52306 607 aa16.42■□□□□ 0.22
CSNK1D-204ENST00000398519 ZNF33BQ06732 778 aa16.42■□□□□ 0.22
CSNK1D-204ENST00000398519 VWA2Q5GFL6 755 aa16.42■□□□□ 0.22
CSNK1D-204ENST00000398519 OR51Q1Q8NH59 317 aa16.42■□□□□ 0.22
CSNK1D-204ENST00000398519 RAB3IL1Q8TBN0 382 aa16.42■□□□□ 0.22
CSNK1D-204ENST00000398519 STT3BQ8TCJ2 826 aa16.42■□□□□ 0.22
CSNK1D-204ENST00000398519 RGMAQ96B86 450 aa16.42■□□□□ 0.22
CSNK1D-204ENST00000398519 SERINC2Q96SA4 455 aa16.42■□□□□ 0.22
CSNK1D-204ENST00000398519 SPSB2Q99619 263 aa16.42■□□□□ 0.22
CSNK1D-204ENST00000398519 EFHD1Q9BUP0 239 aa16.42■□□□□ 0.22
CSNK1D-204ENST00000398519 YIPF2Q9BWQ6 316 aa16.42■□□□□ 0.22
CSNK1D-204ENST00000398519 MRPL1Q9BYD6 325 aaKnown RBP16.42■□□□□ 0.22
CSNK1D-204ENST00000398519 FAM117AQ9C073 453 aa16.42■□□□□ 0.22
CSNK1D-204ENST00000398519 WDR54Q9H977 334 aa16.42■□□□□ 0.22
CSNK1D-204ENST00000398519 COPS7BQ9H9Q2 264 aaPredicted RBP16.42■□□□□ 0.22
CSNK1D-204ENST00000398519 MKKSQ9NPJ1 570 aaPredicted RBP16.42■□□□□ 0.22
CSNK1D-204ENST00000398519 TCFL5Q9UL49 500 aa16.42■□□□□ 0.22
CSNK1D-204ENST00000398519 SLC12A4Q9UP95 1085 aa16.42■□□□□ 0.22
CSNK1D-204ENST00000398519 DNAJC15Q9Y5T4 150 aa16.42■□□□□ 0.22
CSNK1D-204ENST00000398519 TPRP12270 2363 aaKnown RBP16.41■□□□□ 0.22
CSNK1D-204ENST00000398519 URB1O60287 2271 aaKnown RBP16.41■□□□□ 0.22
CSNK1D-204ENST00000398519 SERTM1A2A2V5 107 aa16.41■□□□□ 0.22
CSNK1D-204ENST00000398519 SCELO95171 688 aa16.41■□□□□ 0.22
CSNK1D-204ENST00000398519 HIST1H1TP22492 207 aaPredicted RBP16.41■□□□□ 0.22
CSNK1D-204ENST00000398519 ATP5A1P25705 553 aaKnown RBP16.41■□□□□ 0.22
CSNK1D-204ENST00000398519 SSR2P43308 183 aa16.41■□□□□ 0.22
CSNK1D-204ENST00000398519 TSFMP43897 325 aaKnown RBP16.41■□□□□ 0.22
CSNK1D-204ENST00000398519 ARFIP1P53367 373 aa16.41■□□□□ 0.22
CSNK1D-204ENST00000398519 MTTPP55157 894 aa16.41■□□□□ 0.22
CSNK1D-204ENST00000398519 HMGCS1Q01581 520 aa16.41■□□□□ 0.22
CSNK1D-204ENST00000398519 UGT3A2Q3SY77 523 aa16.41■□□□□ 0.22
CSNK1D-204ENST00000398519 OR4C11Q6IEV9 310 aa16.41■□□□□ 0.22
CSNK1D-204ENST00000398519 ZC3H7AQ8IWR0 971 aaKnown RBP16.41■□□□□ 0.22
CSNK1D-204ENST00000398519 CLYBLQ8N0X4 340 aa16.41■□□□□ 0.22
CSNK1D-204ENST00000398519 CA13Q8N1Q1 262 aa16.41■□□□□ 0.22
CSNK1D-204ENST00000398519 ZNF781Q8N8C0 355 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms