RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 INTS1Q8N201 2190 aaKnown RBP11.24□□□□□ -0.61
TFF3-202ENST00000398431 TGFBR3LH3BV60 316 aa11.23□□□□□ -0.61
TFF3-202ENST00000398431 PEX1O43933 1283 aa11.23□□□□□ -0.61
TFF3-202ENST00000398431 HS6ST1O60243 411 aa11.23□□□□□ -0.61
TFF3-202ENST00000398431 BANF1O75531 89 aa11.23□□□□□ -0.61
TFF3-202ENST00000398431 TOXO94900 526 aa11.23□□□□□ -0.61
TFF3-202ENST00000398431 TFEBP19484 476 aa11.23□□□□□ -0.61
TFF3-202ENST00000398431 HNF4AP41235 474 aa11.23□□□□□ -0.61
TFF3-202ENST00000398431 GABPB1Q06547 395 aaPredicted RBP11.23□□□□□ -0.61
TFF3-202ENST00000398431 TFF3Q07654 80 aa11.23□□□□□ -0.61
TFF3-202ENST00000398431 CRYMQ14894 314 aa11.23□□□□□ -0.61
TFF3-202ENST00000398431 MSS51Q4VC12 460 aa11.23□□□□□ -0.61
TFF3-202ENST00000398431 CCDC137Q6PK04 289 aaKnown RBP11.23□□□□□ -0.61
TFF3-202ENST00000398431 KIAA0408Q6ZU52 694 aa11.23□□□□□ -0.61
TFF3-202ENST00000398431 CEP128Q6ZU80 1094 aa11.23□□□□□ -0.61
TFF3-202ENST00000398431 MDGA2Q7Z553 956 aa11.23□□□□□ -0.61
TFF3-202ENST00000398431 CDH24Q86UP0 819 aa11.23□□□□□ -0.61
TFF3-202ENST00000398431 IGDCC3Q8IVU1 814 aa11.23□□□□□ -0.61
TFF3-202ENST00000398431 CNTN4Q8IWV2 1026 aa11.23□□□□□ -0.61
TFF3-202ENST00000398431 CA13Q8N1Q1 262 aa11.23□□□□□ -0.61
TFF3-202ENST00000398431 RPRMLQ8N4K4 120 aa11.23□□□□□ -0.61
TFF3-202ENST00000398431 ZFP62Q8NB50 900 aaPredicted RBP11.23□□□□□ -0.61
TFF3-202ENST00000398431 OR52N2Q8NGI0 321 aa11.23□□□□□ -0.61
TFF3-202ENST00000398431 LILRB4Q8NHJ6 448 aa11.23□□□□□ -0.61
TFF3-202ENST00000398431 CREB3L4Q8TEY5 395 aa11.23□□□□□ -0.61
TFF3-202ENST00000398431 SLC5A11Q8WWX8 675 aa11.23□□□□□ -0.61
TFF3-202ENST00000398431 NAPGQ99747 312 aaPredicted RBP11.23□□□□□ -0.61
TFF3-202ENST00000398431 DEFB126Q9BYW3 111 aa11.23□□□□□ -0.61
TFF3-202ENST00000398431 UCK2Q9BZX2 261 aa11.23□□□□□ -0.61
TFF3-202ENST00000398431 PRDM9Q9NQV7 894 aa11.23□□□□□ -0.61
TFF3-202ENST00000398431 DEPPQ9NTK1 212 aa11.23□□□□□ -0.61
TFF3-202ENST00000398431 ARL15Q9NXU5 204 aa11.23□□□□□ -0.61
TFF3-202ENST00000398431 SLC17A6Q9P2U8 582 aa11.23□□□□□ -0.61
TFF3-202ENST00000398431 SNX12Q9UMY4 172 aa11.23□□□□□ -0.61
TFF3-202ENST00000398431 PPIEQ9UNP9 301 aaKnown RBP11.23□□□□□ -0.61
TFF3-202ENST00000398431 KLF13Q9Y2Y9 288 aaPredicted RBP11.23□□□□□ -0.61
TFF3-202ENST00000398431 EML6Q6ZMW3 1958 aa11.23□□□□□ -0.61
TFF3-202ENST00000398431 DNAJC13O75165 2243 aa11.23□□□□□ -0.61
TFF3-202ENST00000398431 PINLYPA6NC86 204 aa11.22□□□□□ -0.61
TFF3-202ENST00000398431 TMEM200CA6NKL6 621 aa11.22□□□□□ -0.61
TFF3-202ENST00000398431 KLRC4-KLRK1H3BQV0 150 aa11.22□□□□□ -0.61
TFF3-202ENST00000398431 PRKNO60260 465 aaPredicted RBP11.22□□□□□ -0.61
TFF3-202ENST00000398431 GUCA1CO95843 209 aa11.22□□□□□ -0.61
TFF3-202ENST00000398431 TPOP07202 933 aa11.22□□□□□ -0.61
TFF3-202ENST00000398431 PGAM1P18669 254 aa11.22□□□□□ -0.61
TFF3-202ENST00000398431 AP1S2P56377 157 aa11.22□□□□□ -0.61
TFF3-202ENST00000398431 IL2P60568 153 aa11.22□□□□□ -0.61
TFF3-202ENST00000398431 REEP5Q00765 189 aa11.22□□□□□ -0.61
TFF3-202ENST00000398431 RGS1Q08116 209 aa11.22□□□□□ -0.61
TFF3-202ENST00000398431 RUNX2Q13950 521 aa11.22□□□□□ -0.61
TFF3-202ENST00000398431 CSHL1Q14406 222 aa11.22□□□□□ -0.61
TFF3-202ENST00000398431 TEDDM1Q5T9Z0 273 aa11.22□□□□□ -0.61
TFF3-202ENST00000398431 RNASEH2BQ5TBB1 312 aaKnown RBP11.22□□□□□ -0.61
TFF3-202ENST00000398431 NIPAL1Q6NVV3 410 aa11.22□□□□□ -0.61
TFF3-202ENST00000398431 SBSNQ6UWP8 590 aa11.22□□□□□ -0.61
TFF3-202ENST00000398431 C16orf47Q6ZP98 133 aaPredicted RBP11.22□□□□□ -0.61
TFF3-202ENST00000398431 ABHD13Q7L211 337 aa11.22□□□□□ -0.61
TFF3-202ENST00000398431 CD163Q86VB7 1156 aa11.22□□□□□ -0.61
TFF3-202ENST00000398431 CHTF18Q8WVB6 975 aa11.22□□□□□ -0.61
TFF3-202ENST00000398431 PHF3Q92576 2039 aaKnown RBP11.22□□□□□ -0.61
TFF3-202ENST00000398431 TMEM125Q96AQ2 219 aa11.22□□□□□ -0.61
TFF3-202ENST00000398431 TSNARE1Q96NA8 513 aa11.22□□□□□ -0.61
TFF3-202ENST00000398431 OSBPL9Q96SU4 736 aa11.22□□□□□ -0.61
TFF3-202ENST00000398431 RHBGQ9H310 441 aa11.22□□□□□ -0.61
TFF3-202ENST00000398431 COQ3Q9NZJ6 369 aa11.22□□□□□ -0.61
TFF3-202ENST00000398431 TNFRSF10DQ9UBN6 386 aa11.22□□□□□ -0.61
TFF3-202ENST00000398431 RNF6Q9Y252 685 aa11.22□□□□□ -0.61
TFF3-202ENST00000398431 VWA7Q9Y334 891 aa11.22□□□□□ -0.61
TFF3-202ENST00000398431 MTORP42345 2549 aa11.22□□□□□ -0.61
TFF3-202ENST00000398431 TRBV11-1A0A0K0K1C0 115 aa11.21□□□□□ -0.61
TFF3-202ENST00000398431 NKX2-6A6NCS4 301 aa11.21□□□□□ -0.61
TFF3-202ENST00000398431 CES2O00748 559 aa11.21□□□□□ -0.61
TFF3-202ENST00000398431 FCHO1O14526 889 aa11.21□□□□□ -0.61
TFF3-202ENST00000398431 TFECO14948 347 aaPredicted RBP11.21□□□□□ -0.61
TFF3-202ENST00000398431 ITGA10O75578 1167 aa11.21□□□□□ -0.61
TFF3-202ENST00000398431 PDE9AO76083 593 aa11.21□□□□□ -0.61
TFF3-202ENST00000398431 SERPINA6P08185 405 aa11.21□□□□□ -0.61
TFF3-202ENST00000398431 RNH1P13489 461 aaKnown RBP11.21□□□□□ -0.61
TFF3-202ENST00000398431 PPP2R1BP30154 601 aa11.21□□□□□ -0.61
TFF3-202ENST00000398431 CLCN2P51788 898 aa11.21□□□□□ -0.61
TFF3-202ENST00000398431 GPR85P60893 370 aa11.21□□□□□ -0.61
TFF3-202ENST00000398431 SKP1P63208 163 aa11.21□□□□□ -0.61
TFF3-202ENST00000398431 PPP1R3AQ16821 1122 aa11.21□□□□□ -0.61
TFF3-202ENST00000398431 ERCC6LQ2NKX8 1250 aa11.21□□□□□ -0.61
TFF3-202ENST00000398431 XKR6Q5GH73 641 aa11.21□□□□□ -0.61
TFF3-202ENST00000398431 HECTD2Q5U5R9 776 aa11.21□□□□□ -0.61
TFF3-202ENST00000398431 TMEM211Q6ICI0 200 aa11.21□□□□□ -0.61
TFF3-202ENST00000398431 NXPE4Q6UWF7 544 aa11.21□□□□□ -0.61
TFF3-202ENST00000398431 GALNT7Q86SF2 657 aa11.21□□□□□ -0.61
TFF3-202ENST00000398431 THOC6Q86W42 341 aaKnown RBP11.21□□□□□ -0.61
TFF3-202ENST00000398431 SCUBE1Q8IWY4 988 aa11.21□□□□□ -0.61
TFF3-202ENST00000398431 PPIL6Q8IXY8 311 aa11.21□□□□□ -0.61
TFF3-202ENST00000398431 EID3Q8N140 333 aa11.21□□□□□ -0.61
TFF3-202ENST00000398431 TMEM52Q8NDY8 209 aa11.21□□□□□ -0.61
TFF3-202ENST00000398431 TRPV3Q8NET8 790 aa11.21□□□□□ -0.61
TFF3-202ENST00000398431 B3GNT7Q8NFL0 401 aa11.21□□□□□ -0.61
TFF3-202ENST00000398431 PDLIM5Q96HC4 596 aaKnown RBP11.21□□□□□ -0.61
TFF3-202ENST00000398431 DEFB127Q9H1M4 99 aa11.21□□□□□ -0.61
TFF3-202ENST00000398431 LIN28AQ9H9Z2 209 aaKnown RBP11.21□□□□□ -0.61
TFF3-202ENST00000398431 PELI2Q9HAT8 420 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms