RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 GPSM3Q9Y4H4 160 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 PCDHGB3Q9Y5G1 929 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 A0A1B0GUL6 1792 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 ASNA1O43681 348 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 ATG13O75143 517 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 GSTM1P09488 218 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 ANXA8P13928 327 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 IDSP22304 550 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 RPS26P62854 115 aaKnown RBP4.74□□□□□ -1.65
SMAD4-202ENST00000398417 RUNX1T1Q06455 604 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 PLEKHS1Q5SXH7 462 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 CNKSR3Q6P9H4 555 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 ZNF783Q6ZMS7 281 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 DCDC5Q6ZRR9 648 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 RNF130Q86XS8 419 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 PGBD3Q8N328 593 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 ALPK1Q96QP1 1244 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 DCLRE1CQ96SD1 692 aaKnown RBP4.74□□□□□ -1.65
SMAD4-202ENST00000398417 UCK2Q9BZX2 261 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 DSN1Q9H410 356 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 MALT1Q9UDY8 824 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 SLC9A8Q9Y2E8 581 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 EFCAB10A6NFE3 127 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 MYL12BO14950 172 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 IFNW1P05000 195 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 ADH1AP07327 375 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 ALOX5P09917 674 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 JUNBP17275 347 aaPredicted RBP4.74□□□□□ -1.65
SMAD4-202ENST00000398417 ITIH1P19827 911 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 TM4SF4P48230 202 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 RNF144AP50876 292 aaPredicted RBP4.74□□□□□ -1.65
SMAD4-202ENST00000398417 GPAT3Q53EU6 434 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 TOR1AIP1Q5JTV8 583 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 TPRG1LQ5T0D9 272 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 C11orf88Q6PI97 169 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 MTSS1LQ765P7 747 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 OR9Q2Q8NGE9 314 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 FIBINQ8TAL6 211 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 BBS4Q96RK4 519 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 FNDC11Q9BVV2 318 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 VN1R3Q9BXE9 311 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 STOX2Q9P2F5 926 aaPredicted RBP4.74□□□□□ -1.65
SMAD4-202ENST00000398417 PCDH17O14917 1159 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 ANKRD28O15084 1053 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 MED26O95402 600 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 NR2F1P10589 423 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 ITGA2P17301 1181 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 PTNP21246 168 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 UGT2B15P54855 530 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 GABARAPL2P60520 117 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 RELAQ04206 551 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 ZNF691Q5VV52 312 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 SPATC1Q76KD6 591 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 DNASE1L2Q92874 299 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 NACC2Q96BF6 587 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 SCRN2Q96FV2 425 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 DMRTB1Q96MA1 342 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 MACROD1Q9BQ69 325 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 TRIT1Q9H3H1 467 aaKnown RBP4.74□□□□□ -1.65
SMAD4-202ENST00000398417 REEP4Q9H6H4 257 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 MAGIXQ9H6Y5 334 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 NMNAT1Q9HAN9 279 aaPredicted RBP4.74□□□□□ -1.65
SMAD4-202ENST00000398417 CCDC177Q9NQR7 707 aaPredicted RBP4.74□□□□□ -1.65
SMAD4-202ENST00000398417 C14orf119Q9NWQ9 140 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 ASXL3Q9C0F0 2248 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 CACNA1DQ01668 2161 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 SNX4O95219 450 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 TYRP14679 529 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 TIMP2P16035 220 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 SLC6A11P48066 632 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 TAS2R50P59544 299 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 NOGQ13253 232 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 RPS26P11Q5JNZ5 115 aaPredicted RBP4.74□□□□□ -1.65
SMAD4-202ENST00000398417 METTL3Q86U44 580 aaKnown RBP4.74□□□□□ -1.65
SMAD4-202ENST00000398417 C10orf111Q8N326 155 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 C16orf78Q8WTQ4 265 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 ARRDC3Q96B67 414 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 AHSPQ9NZD4 102 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 ZNF282Q9UDV7 671 aaPredicted RBP4.74□□□□□ -1.65
SMAD4-202ENST00000398417 GMEB1Q9Y692 573 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 SVILO95425 2214 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 OR1F1O43749 312 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 C9P02748 559 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 ALPPL2P10696 532 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 BMP4P12644 408 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 SLC19A1P41440 591 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 MASP1P48740 699 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 ISL1P61371 349 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 KIAA1614Q5VZ46 1190 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 MEX3DQ86XN8 651 aaKnown RBP4.74□□□□□ -1.65
SMAD4-202ENST00000398417 KRT73Q86Y46 540 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 SLAIN1Q8ND83 568 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 RDH12Q96NR8 316 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 NUAK2Q9H093 628 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 OR51I1Q9H343 314 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 CERS4Q9HA82 394 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 ACOT13Q9NPJ3 140 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 H2AFY2Q9P0M6 372 aaPredicted RBP4.74□□□□□ -1.65
SMAD4-202ENST00000398417 KCNK6Q9Y257 313 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 ERGIC3Q9Y282 383 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms