RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 ARHGEF9O43307 516 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 HBP1O60381 514 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 TRIM13O60858 407 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 PRKRAO75569 313 aaKnown RBP6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 TNFAIP8O95379 198 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 S100A8P05109 93 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 MPOP05164 745 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 PEPDP12955 493 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 IFI30P13284 250 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 DTYMKP23919 212 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 HSD11B1P28845 292 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 NUDT2P50583 147 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 INCA1Q0VD86 236 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 CEBPEQ15744 281 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 DECR1Q16698 335 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 SFT2D3Q587I9 215 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 SEL1L3Q68CR1 1132 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 SCARA3Q6AZY7 606 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 PLPPR4Q7Z2D5 763 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 ARPINQ7Z6K5 226 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 TMEM126BQ8IUX1 230 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 Q8N9G6 341 aaPredicted RBP6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 SYT14Q8NB59 555 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 COLGALT1Q8NBJ5 622 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 CCNYQ8ND76 341 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 MAGEE2Q8TD90 523 aaPredicted RBP6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 DLG3Q92796 817 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 SERPINB11Q96P15 392 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 PCYT2Q99447 389 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 RNF32Q9H0A6 362 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 OBP2BQ9NPH6 170 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 DPP3Q9NY33 737 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 INTS6Q9UL03 887 aaKnown RBP6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 SF3B1O75533 1304 aaKnown RBP eCLIP6.34□□□□□ -1.391e-6■■■■■ 83.8
TM9SF4-202ENST00000398022 LRRN3E7EW58 273 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 NEDD8-MDP1E9PL57 170 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 SOX1O00570 391 aaPredicted RBP6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 CRHP06850 196 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 GUSBP08236 651 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 IGFBP5P24593 272 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 MGAT1P26572 445 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 PRKAA2P54646 552 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 SOX8P57073 446 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 AP3S2P59780 193 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 SOX4Q06945 474 aaPredicted RBP6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 ACSM1Q08AH1 577 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 KLF10Q13118 480 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 CCNIQ14094 377 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 IL18Q14116 193 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 PCLAFQ15004 111 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 EFCAB12Q6NXP0 572 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 TSSK4Q6SA08 328 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 C17orf99Q6UX52 265 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 CCDC103Q8IW40 242 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 ABI1Q8IZP0 508 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 BEND7Q8N7W2 519 aaPredicted RBP6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 OR5D18Q8NGL1 313 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 OR52J3Q8NH60 311 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 ZCCHC14Q8WYQ9 949 aaKnown RBP6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 SLC12A9Q9BXP2 914 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 ACTR6Q9GZN1 396 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 C20orf27Q9GZN8 174 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 SPNS1Q9H2V7 528 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 LRRN3Q9H3W5 708 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 FBXO44Q9H4M3 255 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 MGAT4CQ9UBM8 478 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 EIF3KQ9UBQ5 218 aaKnown RBP6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 RAB26Q9ULW5 256 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 ANKDD1BA6NHY2 528 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 M0QZ92 97 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 SLC30A4O14863 429 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 ZNF623O75123 536 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 ALDOAP04075 364 aaKnown RBP6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 ZNF10P21506 573 aaPredicted RBP6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 CCNOP22674 350 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 POU1F1P28069 291 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 PPP2R1BP30154 601 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 OR2B6P58173 313 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 GRM2Q14416 872 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 CDK10Q15131 360 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 EOGTQ5NDL2 527 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 UBE2UQ5VVX9 321 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 RPL13AP3Q6NVV1 102 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 TMEM108Q6UXF1 575 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 NUDT18Q6ZVK8 323 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 SATL1Q86VE3 508 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 AMZ2Q86W34 360 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 PHACTR4Q8IZ21 702 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 MEIOBQ8N635 442 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 POMGNT2Q8NAT1 580 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 OR52H1Q8NGJ2 320 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 FAM162AQ96A26 154 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 CERS2Q96G23 380 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 C12orf66Q96MD2 445 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 GCNAQ96QF7 691 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 CITED1Q99966 193 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 PLK2Q9NYY3 685 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 GDF2Q9UK05 429 aaPredicted RBP6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 ACSL5Q9ULC5 683 aa6.34□□□□□ -1.39
TM9SF4-202ENST00000398022 A0A0J9YYE9 177 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms