RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 NDUFA9Q16795 377 aa11.98□□□□□ -0.49
SOCS6-201ENST00000397942 DCP2Q8IU60 420 aaKnown RBP11.98□□□□□ -0.49
SOCS6-201ENST00000397942 OR8J1Q8NGP2 316 aa11.98□□□□□ -0.49
SOCS6-201ENST00000397942 MAL2Q969L2 176 aa11.98□□□□□ -0.49
SOCS6-201ENST00000397942 S100A13Q99584 98 aa11.98□□□□□ -0.49
SOCS6-201ENST00000397942 HERC2P3Q9BVR0 1158 aa11.98□□□□□ -0.49
SOCS6-201ENST00000397942 TNFRSF10DQ9UBN6 386 aa11.98□□□□□ -0.49
SOCS6-201ENST00000397942 C4AP0C0L4 1744 aa11.98□□□□□ -0.49
SOCS6-201ENST00000397942 C4BP0C0L5 1744 aa11.98□□□□□ -0.49
SOCS6-201ENST00000397942 CSF2P04141 144 aa11.98□□□□□ -0.49
SOCS6-201ENST00000397942 POLR2IP36954 125 aaKnown RBP11.98□□□□□ -0.49
SOCS6-201ENST00000397942 BCAP31P51572 246 aa11.98□□□□□ -0.49
SOCS6-201ENST00000397942 NCS1P62166 190 aa11.98□□□□□ -0.49
SOCS6-201ENST00000397942 CCDC116Q8IYX3 515 aa11.98□□□□□ -0.49
SOCS6-201ENST00000397942 CHST14Q8NCH0 376 aa11.98□□□□□ -0.49
SOCS6-201ENST00000397942 KCNN1Q92952 543 aa11.98□□□□□ -0.49
SOCS6-201ENST00000397942 SGIP1Q9BQI5 828 aa11.98□□□□□ -0.49
SOCS6-201ENST00000397942 SLC30A2Q9BRI3 323 aa11.98□□□□□ -0.49
SOCS6-201ENST00000397942 CAPN5O15484 640 aaPredicted RBP11.97□□□□□ -0.49
SOCS6-201ENST00000397942 CSF2RAP15509 400 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 ZSWIM9Q86XI8 627 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 GPR26Q8NDV2 337 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 BIRC8Q96P09 236 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 BARD1Q99728 777 aaKnown RBP11.97□□□□□ -0.49
SOCS6-201ENST00000397942 MS4A12Q9NXJ0 267 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 FBXL12Q9NXK8 326 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 FAM172BPA6NC97 362 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 ARNTLO00327 626 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 NDUFS4O43181 175 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 IL3P08700 152 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 ATXN1LP0C7T5 689 aaKnown RBP11.97□□□□□ -0.49
SOCS6-201ENST00000397942 CDK4P11802 303 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 IGFBP6P24592 240 aaPredicted RBP11.97□□□□□ -0.49
SOCS6-201ENST00000397942 SNAP47Q5SQN1 464 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 ENPP7Q6UWV6 458 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.97□□□□□ -0.49
SOCS6-201ENST00000397942 LINC00471Q8N535 108 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 CELF5Q8N6W0 485 aaKnown RBP11.97□□□□□ -0.49
SOCS6-201ENST00000397942 MINDY2Q8NBR6 621 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 KLHDC9Q8NEP7 349 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 LRIG1Q96JA1 1093 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 F2RL3Q96RI0 385 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 TRIB3Q96RU7 358 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 CREBZFQ9NS37 354 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 A0A1B0GVG6 124 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 BOLA2-SMG1P6H3BVE0 249 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 BCAS1O75363 584 aaPredicted RBP11.97□□□□□ -0.49
SOCS6-201ENST00000397942 RFPL2O75678 378 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 SLC13A2Q13183 592 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 RAB33AQ14088 237 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 ELAVL3Q14576 367 aaKnown RBP11.97□□□□□ -0.49
SOCS6-201ENST00000397942 SPHARQ15513 63 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 IER5LQ5T953 404 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 ZNF551Q7Z340 670 aaPredicted RBP11.97□□□□□ -0.49
SOCS6-201ENST00000397942 CARM1Q86X55 608 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 FUNDC1Q8IVP5 155 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 EHD1Q9H4M9 534 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 XKR8Q9H6D3 395 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 TMEM30AQ9NV96 361 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 AKAP6Q13023 2319 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 NPIPB15A6NHN6 443 aaPredicted RBP11.97□□□□□ -0.49
SOCS6-201ENST00000397942 SRCP12931 536 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 GMFBP60983 142 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 CLCA4Q14CN2 919 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 TMEM236Q5W0B7 351 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 CHERPQ8IWX8 916 aaKnown RBP11.97□□□□□ -0.49
SOCS6-201ENST00000397942 OR8H1Q8NGG4 311 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 FIBINQ8TAL6 211 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 NETO1Q8TDF5 533 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 GTF2H4Q92759 462 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 TRNT1Q96Q11 434 aaKnown RBP11.97□□□□□ -0.49
SOCS6-201ENST00000397942 COMMD9Q9P000 198 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 MGAT4BQ9UQ53 548 aa11.97□□□□□ -0.49
SOCS6-201ENST00000397942 EIF3FO00303 357 aaPredicted RBP11.96□□□□□ -0.49
SOCS6-201ENST00000397942 MUSKO15146 869 aa11.96□□□□□ -0.49
SOCS6-201ENST00000397942 ADAM12O43184 909 aa11.96□□□□□ -0.49
SOCS6-201ENST00000397942 RHOP08100 348 aa11.96□□□□□ -0.49
SOCS6-201ENST00000397942 CKMT1AP12532 417 aa11.96□□□□□ -0.49
SOCS6-201ENST00000397942 NDUFS1P28331 727 aa11.96□□□□□ -0.49
SOCS6-201ENST00000397942 RPS26P62854 115 aaKnown RBP11.96□□□□□ -0.49
SOCS6-201ENST00000397942 IDNKQ5T6J7 187 aa11.96□□□□□ -0.49
SOCS6-201ENST00000397942 OR4E2Q8NGC2 313 aa11.96□□□□□ -0.49
SOCS6-201ENST00000397942 ZNF675Q8TD23 568 aa11.96□□□□□ -0.49
SOCS6-201ENST00000397942 POF1BQ8WVV4 589 aa11.96□□□□□ -0.49
SOCS6-201ENST00000397942 TBCCD1Q9NVR7 557 aa11.96□□□□□ -0.49
SOCS6-201ENST00000397942 PLAGL1Q9UM63 463 aa11.96□□□□□ -0.49
SOCS6-201ENST00000397942 MCIDASD6RGH6 385 aa11.96□□□□□ -0.49
SOCS6-201ENST00000397942 TMEM189-UBE2V1I3L0A0 370 aa11.96□□□□□ -0.49
SOCS6-201ENST00000397942 PSKH1P11801 424 aa11.96□□□□□ -0.49
SOCS6-201ENST00000397942 SDC1P18827 310 aa11.96□□□□□ -0.49
SOCS6-201ENST00000397942 ZNF140P52738 457 aaPredicted RBP11.96□□□□□ -0.49
SOCS6-201ENST00000397942 TBPL1P62380 186 aa11.96□□□□□ -0.49
SOCS6-201ENST00000397942 ABATP80404 500 aa11.96□□□□□ -0.49
SOCS6-201ENST00000397942 TAF13Q15543 124 aa11.96□□□□□ -0.49
SOCS6-201ENST00000397942 ANKDD1AQ495B1 522 aa11.96□□□□□ -0.49
SOCS6-201ENST00000397942 SLC36A3Q495N2 470 aa11.96□□□□□ -0.49
SOCS6-201ENST00000397942 XKR4Q5GH76 650 aa11.96□□□□□ -0.49
SOCS6-201ENST00000397942 Q6ZSR9 355 aa11.96□□□□□ -0.49
SOCS6-201ENST00000397942 LINC01465Q8N7H1 131 aa11.96□□□□□ -0.49
SOCS6-201ENST00000397942 SCAIQ8N9R8 606 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms