RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 MRPS33Q9Y291 106 aaKnown RBP12.92□□□□□ -0.34
CXCL12-205ENST00000395794 COL12A1Q99715 3063 aa12.92□□□□□ -0.34
CXCL12-205ENST00000395794 A0A087X1B8 175 aa12.91□□□□□ -0.34
CXCL12-205ENST00000395794 CTAGE15A4D2H0 777 aa12.91□□□□□ -0.34
CXCL12-205ENST00000395794 LRIT2A6NDA9 550 aa12.91□□□□□ -0.34
CXCL12-205ENST00000395794 CLDN4O14493 209 aa12.91□□□□□ -0.34
CXCL12-205ENST00000395794 B3GALT2O43825 422 aa12.91□□□□□ -0.34
CXCL12-205ENST00000395794 DNAJB6O75190 326 aa12.91□□□□□ -0.34
CXCL12-205ENST00000395794 RASAL1O95294 804 aa12.91□□□□□ -0.34
CXCL12-205ENST00000395794 C1QAP02745 245 aa12.91□□□□□ -0.34
CXCL12-205ENST00000395794 TUBB4AP04350 444 aa12.91□□□□□ -0.34
CXCL12-205ENST00000395794 SLC35E2BP0CK96 405 aa12.91□□□□□ -0.34
CXCL12-205ENST00000395794 PLA2G16P53816 162 aa12.91□□□□□ -0.34
CXCL12-205ENST00000395794 SLC26A5P58743 744 aa12.91□□□□□ -0.34
CXCL12-205ENST00000395794 DOC2AQ14183 400 aa12.91□□□□□ -0.34
CXCL12-205ENST00000395794 RCN2Q14257 317 aa12.91□□□□□ -0.34
CXCL12-205ENST00000395794 FBXO48Q5FWF7 155 aa12.91□□□□□ -0.34
CXCL12-205ENST00000395794 MROH9Q5TGP6 573 aa12.91□□□□□ -0.34
CXCL12-205ENST00000395794 FCRLBQ6BAA4 426 aa12.91□□□□□ -0.34
CXCL12-205ENST00000395794 H3F3CQ6NXT2 135 aa12.91□□□□□ -0.34
CXCL12-205ENST00000395794 KLC3Q6P597 504 aa12.91□□□□□ -0.34
CXCL12-205ENST00000395794 ISCA2Q86U28 154 aa12.91□□□□□ -0.34
CXCL12-205ENST00000395794 CTAGE6Q86UF2 777 aa12.91□□□□□ -0.34
CXCL12-205ENST00000395794 BEST3Q8N1M1 668 aa12.91□□□□□ -0.34
CXCL12-205ENST00000395794 CA13Q8N1Q1 262 aa12.91□□□□□ -0.34
CXCL12-205ENST00000395794 HORMAD2Q8N7B1 307 aa12.91□□□□□ -0.34
CXCL12-205ENST00000395794 ADAMTS18Q8TE60 1221 aa12.91□□□□□ -0.34
CXCL12-205ENST00000395794 ESAMQ96AP7 390 aa12.91□□□□□ -0.34
CXCL12-205ENST00000395794 MS4A6EQ96DS6 147 aa12.91□□□□□ -0.34
CXCL12-205ENST00000395794 COPG2Q9UBF2 871 aa12.91□□□□□ -0.34
CXCL12-205ENST00000395794 OPTCQ9UBM4 332 aa12.91□□□□□ -0.34
CXCL12-205ENST00000395794 MMACHCQ9Y4U1 282 aa12.91□□□□□ -0.34
CXCL12-205ENST00000395794 ANGPTL3Q9Y5C1 460 aa12.91□□□□□ -0.34
CXCL12-205ENST00000395794 IKBKGQ9Y6K9 419 aa12.91□□□□□ -0.34
CXCL12-205ENST00000395794 CCDC189A1A4V9 331 aa12.9□□□□□ -0.34
CXCL12-205ENST00000395794 FAM227AF5H4B4 570 aa12.9□□□□□ -0.34
CXCL12-205ENST00000395794 KERAO60938 352 aa12.9□□□□□ -0.34
CXCL12-205ENST00000395794 CD46P15529 392 aa12.9□□□□□ -0.34
CXCL12-205ENST00000395794 MAOAP21397 527 aa12.9□□□□□ -0.34
CXCL12-205ENST00000395794 PER3P56645 1201 aa12.9□□□□□ -0.34
CXCL12-205ENST00000395794 BTG2P78543 158 aa12.9□□□□□ -0.34
CXCL12-205ENST00000395794 OC90Q02509 493 aaPredicted RBP12.9□□□□□ -0.34
CXCL12-205ENST00000395794 SLC13A2Q13183 592 aa12.9□□□□□ -0.34
CXCL12-205ENST00000395794 CHIT1Q13231 466 aa12.9□□□□□ -0.34
CXCL12-205ENST00000395794 EFTUD2Q15029 972 aaKnown RBP eCLIP12.9□□□□□ -0.34
CXCL12-205ENST00000395794 TBCCQ15814 346 aa12.9□□□□□ -0.34
CXCL12-205ENST00000395794 CRLF3Q8IUI8 442 aa12.9□□□□□ -0.34
CXCL12-205ENST00000395794 LGI4Q8N135 537 aa12.9□□□□□ -0.34
CXCL12-205ENST00000395794 SRFBP1Q8NEF9 429 aaKnown RBP12.9□□□□□ -0.34
CXCL12-205ENST00000395794 OR2L5Q8NG80 312 aa12.9□□□□□ -0.34
CXCL12-205ENST00000395794 DNAJB8Q8NHS0 232 aa12.9□□□□□ -0.34
CXCL12-205ENST00000395794 IFT81Q8WYA0 676 aa12.9□□□□□ -0.34
CXCL12-205ENST00000395794 WDR34Q96EX3 536 aa12.9□□□□□ -0.34
CXCL12-205ENST00000395794 SERINC2Q96SA4 455 aa12.9□□□□□ -0.34
CXCL12-205ENST00000395794 ROGDIQ9GZN7 287 aa12.9□□□□□ -0.34
CXCL12-205ENST00000395794 ZDHHC18Q9NUE0 388 aa12.9□□□□□ -0.34
CXCL12-205ENST00000395794 OSGIN2Q9Y236 505 aa12.9□□□□□ -0.34
CXCL12-205ENST00000395794 A0A0G2JN53 185 aa12.89□□□□□ -0.35
CXCL12-205ENST00000395794 TCRBV16S1A1N1A0A5B0 115 aa12.89□□□□□ -0.35
CXCL12-205ENST00000395794 SYNDIG1LA6NDD5 238 aa12.89□□□□□ -0.35
CXCL12-205ENST00000395794 K7EPI3 171 aa12.89□□□□□ -0.35
CXCL12-205ENST00000395794 UBXN8O00124 270 aa12.89□□□□□ -0.35
CXCL12-205ENST00000395794 CDK2AP1O14519 115 aa12.89□□□□□ -0.35
CXCL12-205ENST00000395794 CTAGE8P0CG41 777 aa12.89□□□□□ -0.35
CXCL12-205ENST00000395794 GFAPP14136 432 aa12.89□□□□□ -0.35
CXCL12-205ENST00000395794 EPB42P16452 691 aa12.89□□□□□ -0.35
CXCL12-205ENST00000395794 TYK2P29597 1187 aa12.89□□□□□ -0.35
CXCL12-205ENST00000395794 SERPINB1P30740 379 aa12.89□□□□□ -0.35
CXCL12-205ENST00000395794 HNRNPH1P31943 449 aaKnown RBP12.89□□□□□ -0.35
CXCL12-205ENST00000395794 MSH2P43246 934 aa12.89□□□□□ -0.35
CXCL12-205ENST00000395794 KCNC1P48547 511 aa12.89□□□□□ -0.35
CXCL12-205ENST00000395794 SERPINB8P50452 374 aa12.89□□□□□ -0.35
CXCL12-205ENST00000395794 MTTPP55157 894 aa12.89□□□□□ -0.35
CXCL12-205ENST00000395794 BMPR2Q13873 1038 aa12.89□□□□□ -0.35
CXCL12-205ENST00000395794 ZNF766Q5HY98 468 aa12.89□□□□□ -0.35
CXCL12-205ENST00000395794 TAOK1Q7L7X3 1001 aa12.89□□□□□ -0.35
CXCL12-205ENST00000395794 RPS19BP1Q86WX3 136 aaKnown RBP12.89□□□□□ -0.35
CXCL12-205ENST00000395794 CTAGE4Q8IX94 777 aa12.89□□□□□ -0.35
CXCL12-205ENST00000395794 MMGT1Q8N4V1 131 aa12.89□□□□□ -0.35
CXCL12-205ENST00000395794 NR4A3Q92570 626 aa12.89□□□□□ -0.35
CXCL12-205ENST00000395794 NXNL1Q96CM4 212 aa12.89□□□□□ -0.35
CXCL12-205ENST00000395794 KCNC2Q96PR1 638 aa12.89□□□□□ -0.35
CXCL12-205ENST00000395794 SLX1AQ9BQ83 275 aa12.89□□□□□ -0.35
CXCL12-205ENST00000395794 PRTFDC1Q9NRG1 225 aa12.89□□□□□ -0.35
CXCL12-205ENST00000395794 SNX15Q9NRS6 342 aa12.89□□□□□ -0.35
CXCL12-205ENST00000395794 IGSF5Q9NSI5 407 aa12.89□□□□□ -0.35
CXCL12-205ENST00000395794 PLEKHB1Q9UF11 243 aaPredicted RBP12.89□□□□□ -0.35
CXCL12-205ENST00000395794 ERRFI1Q9UJM3 462 aaPredicted RBP12.89□□□□□ -0.35
CXCL12-205ENST00000395794 ZNF490Q9ULM2 529 aaPredicted RBP12.89□□□□□ -0.35
CXCL12-205ENST00000395794 SPACA6W5XKT8 324 aa12.89□□□□□ -0.35
CXCL12-205ENST00000395794 LRRK2Q5S007 2527 aa12.89□□□□□ -0.35
CXCL12-205ENST00000395794 A0A096LPK6 155 aa12.88□□□□□ -0.35
CXCL12-205ENST00000395794 SAGE2PA6NJ88 616 aa12.88□□□□□ -0.35
CXCL12-205ENST00000395794 GABRR3A8MPY1 467 aa12.88□□□□□ -0.35
CXCL12-205ENST00000395794 A8MUA0 341 aa12.88□□□□□ -0.35
CXCL12-205ENST00000395794 KIF2AO00139 706 aaPredicted RBP12.88□□□□□ -0.35
CXCL12-205ENST00000395794 MLYCDO95822 493 aa12.88□□□□□ -0.35
CXCL12-205ENST00000395794 C2P06681 752 aa12.88□□□□□ -0.35
CXCL12-205ENST00000395794 INHBAP08476 426 aa12.88□□□□□ -0.35
CXCL12-205ENST00000395794 PCNAP12004 261 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms