RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 CCM2Q9BSQ5 444 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 IL1RAPQ9NPH3 570 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 MIEF1Q9NQG6 463 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 POLE3Q9NRF9 147 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 PLSCR3Q9NRY6 295 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 IL17CQ9P0M4 197 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 SPACA6W5XKT8 324 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 ARID2Q68CP9 1835 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 WWP2O00308 870 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 SIX3O95343 332 aaPredicted RBP5.49□□□□□ -1.53
RFFL-202ENST00000394597 CRHBPP24387 322 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 NUDT1P36639 197 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 SUOXP51687 545 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 AP5B1Q2VPB7 878 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 MZT2AQ6P582 158 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 ZNF613Q6PF04 617 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 CRTC1Q6UUV9 634 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 AMZ2Q86W34 360 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 GALNT13Q8IUC8 556 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 LACC1Q8IV20 430 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 ANKRD53Q8N9V6 530 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 OR5K1Q8NHB7 308 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 KLK6Q92876 244 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 RAB7BQ96AH8 199 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 C1GALT1C1Q96EU7 318 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 TMEM74Q96NL1 305 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 MND1Q9BWT6 205 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 GSDMCQ9BYG8 508 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 CPEB1Q9BZB8 566 aaKnown RBP5.49□□□□□ -1.53
RFFL-202ENST00000394597 SCPEP1Q9HB40 452 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 FAM118AQ9NWS6 357 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 FBXL12Q9NXK8 326 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 COPZ2Q9P299 210 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 SLC27A6Q9Y2P4 619 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 AP3M1Q9Y2T2 418 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 TCRBV3S1A0A5B6 114 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 CASKO14936 926 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 ADH1BP00325 375 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 IGHA2P01877 340 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 CHRM5P08912 532 aaPredicted RBP5.48□□□□□ -1.53
RFFL-202ENST00000394597 ATXN1LP0C7T5 689 aaKnown RBP5.48□□□□□ -1.53
RFFL-202ENST00000394597 CD1DP15813 335 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 BPIP17213 487 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 AGXTP21549 392 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 ACRV1P26436 265 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 HLA-FP30511 346 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 MAT2AP31153 395 aaKnown RBP5.48□□□□□ -1.53
RFFL-202ENST00000394597 SDC2P34741 201 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 POLR2JP52435 117 aaKnown RBP5.48□□□□□ -1.53
RFFL-202ENST00000394597 CDKN2DP55273 166 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 MTPNP58546 118 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 CDC42P60953 191 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 PCDH1Q08174 1060 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 GPR68Q15743 365 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 CDONQ4KMG0 1287 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 AFMIDQ63HM1 303 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 DGLUCYQ7Z3D6 616 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 RGL4Q8IZJ4 473 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 CBARPQ8N350 705 aaPredicted RBP5.48□□□□□ -1.53
RFFL-202ENST00000394597 PARP16Q8N5Y8 322 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 TRAM1L1Q8N609 369 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 MDGA1Q8NFP4 955 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 RHEBL1Q8TAI7 183 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 SCAMP4Q969E2 229 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 RAD51AP1Q96B01 352 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 Q96MT0 163 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 RDH12Q96NR8 316 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 CCDC32Q9BV29 185 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 ERVMER34-1Q9H9K5 563 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 FBRSL1Q9HCM7 1045 aaKnown RBP5.48□□□□□ -1.53
RFFL-202ENST00000394597 IMP3Q9NV31 184 aaKnown RBP5.48□□□□□ -1.53
RFFL-202ENST00000394597 CLN6Q9NWW5 311 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 GALPQ9UBC7 116 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 COMMD3Q9UBI1 195 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 LHX3Q9UBR4 397 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 CCL26Q9Y258 94 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 TMEM5Q9Y2B1 443 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 INMT-MINDY4F8WBC2 141 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 M0R233 179 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 CDK2AP1O14519 115 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 SDHDO14521 159 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 PIP5K1BO14986 540 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 MUSKO15146 869 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 SULT1B1O43704 296 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 GMDSO60547 372 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 HOXB2P14652 356 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 ARSAP15289 507 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 MYL12AP19105 171 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 FDXRP22570 491 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 TGM1P22735 817 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 GPC1P35052 558 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 MAGEA2P43356 314 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 SPINT3P49223 89 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 HNMTP50135 292 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 AP1S2P56377 157 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 EEFSECP57772 596 aaKnown RBP5.48□□□□□ -1.53
RFFL-202ENST00000394597 HTRA4P83105 476 aaPredicted RBP5.48□□□□□ -1.53
RFFL-202ENST00000394597 CNTN1Q12860 1018 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 TMEM115Q12893 351 aaPredicted RBP5.48□□□□□ -1.53
RFFL-202ENST00000394597 TECRLQ5HYJ1 363 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms