RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 QSOX1O00391 747 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 SCAMP2O15127 329 aaKnown RBP15.5■□□□□ 0.07
PCDH1-203ENST00000394536 SRCP12931 536 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 RORCP51449 518 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 SRP54P61011 504 aaKnown RBP15.5■□□□□ 0.07
PCDH1-203ENST00000394536 ZNF45Q02386 682 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 RNASE12Q5GAN4 147 aaKnown RBP15.5■□□□□ 0.07
PCDH1-203ENST00000394536 ASB11Q8WXH4 323 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 DEFB118Q96PH6 123 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 TTYH2Q9BSA4 534 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 SORBS1Q9BX66 1292 aaKnown RBP15.5■□□□□ 0.07
PCDH1-203ENST00000394536 KLF16Q9BXK1 252 aaPredicted RBP15.5■□□□□ 0.07
PCDH1-203ENST00000394536 MKLN1Q9UL63 735 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 F5P12259 2224 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 UNCXA6NJT0 531 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 ARHGEF33A8MVX0 844 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 IGLV3-27P01718 113 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 C1QCP02747 245 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 TIA1P31483 386 aaKnown RBP eCLIP15.5■□□□□ 0.07
PCDH1-203ENST00000394536 CA5AP35218 305 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 SELENOWP63302 87 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 IL18Q14116 193 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 MBTPS1Q14703 1052 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 CRB2Q5IJ48 1285 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 SYT6Q5T7P8 510 aaPredicted RBP15.5■□□□□ 0.07
PCDH1-203ENST00000394536 CST9Q5W186 159 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 MEX3DQ86XN8 651 aaKnown RBP15.5■□□□□ 0.07
PCDH1-203ENST00000394536 TMEM25Q86YD3 366 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 PARP16Q8N5Y8 322 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 UBE2E3Q969T4 207 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 ZIC5Q96T25 663 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 DUSP21Q9H596 190 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 PTGFRNQ9P2B2 879 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 IFT52Q9Y366 437 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 IL3P08700 152 aa15.49■□□□□ 0.07
PCDH1-203ENST00000394536 PAICSP22234 425 aaKnown RBP15.49■□□□□ 0.07
PCDH1-203ENST00000394536 PTGER1P34995 402 aa15.49■□□□□ 0.07
PCDH1-203ENST00000394536 HBA1P69905 142 aa15.49■□□□□ 0.07
PCDH1-203ENST00000394536 CCSMST1Q4G0I0 132 aa15.49■□□□□ 0.07
PCDH1-203ENST00000394536 ZDHHC20Q5W0Z9 365 aa15.49■□□□□ 0.07
PCDH1-203ENST00000394536 KDM4DQ6B0I6 523 aa15.49■□□□□ 0.07
PCDH1-203ENST00000394536 SLC16A12Q6ZSM3 486 aa15.49■□□□□ 0.07
PCDH1-203ENST00000394536 ARMCX6Q7L4S7 300 aa15.49■□□□□ 0.07
PCDH1-203ENST00000394536 OTOP2Q7RTS6 562 aa15.49■□□□□ 0.07
PCDH1-203ENST00000394536 OXR1Q8N573 874 aa15.49■□□□□ 0.07
PCDH1-203ENST00000394536 TMCO6Q96DC7 493 aa15.49■□□□□ 0.07
PCDH1-203ENST00000394536 PHOX2BQ99453 314 aa15.49■□□□□ 0.07
PCDH1-203ENST00000394536 CLSTN3Q9BQT9 956 aa15.49■□□□□ 0.07
PCDH1-203ENST00000394536 SLC52A3Q9NQ40 469 aa15.49■□□□□ 0.07
PCDH1-203ENST00000394536 CACNA1CQ13936 2221 aa15.49■□□□□ 0.07
PCDH1-203ENST00000394536 SERPINI2O75830 405 aa15.49■□□□□ 0.07
PCDH1-203ENST00000394536 CXCR4P61073 352 aa15.49■□□□□ 0.07
PCDH1-203ENST00000394536 RPS26P11Q5JNZ5 115 aaPredicted RBP15.49■□□□□ 0.07
PCDH1-203ENST00000394536 ZNF551Q7Z340 670 aaPredicted RBP15.49■□□□□ 0.07
PCDH1-203ENST00000394536 CRELD1Q96HD1 420 aa15.49■□□□□ 0.07
PCDH1-203ENST00000394536 NIPSNAP1Q9BPW8 284 aa15.49■□□□□ 0.07
PCDH1-203ENST00000394536 UCK2Q9BZX2 261 aa15.49■□□□□ 0.07
PCDH1-203ENST00000394536 ZCCHC3Q9NUD5 404 aaKnown RBP15.49■□□□□ 0.07
PCDH1-203ENST00000394536 TAS2R9Q9NYW1 312 aa15.49■□□□□ 0.07
PCDH1-203ENST00000394536 ZNF624Q9P2J8 865 aaPredicted RBP15.49■□□□□ 0.07
PCDH1-203ENST00000394536 ZNF639Q9UID6 485 aa15.49■□□□□ 0.07
PCDH1-203ENST00000394536 OR1F1O43749 312 aa15.49■□□□□ 0.07
PCDH1-203ENST00000394536 CSTF2P33240 577 aaKnown RBP eCLIP15.49■□□□□ 0.07
PCDH1-203ENST00000394536 TALDO1P37837 337 aa15.49■□□□□ 0.07
PCDH1-203ENST00000394536 RGS6P49758 472 aa15.49■□□□□ 0.07
PCDH1-203ENST00000394536 ITGA1P56199 1179 aa15.49■□□□□ 0.07
PCDH1-203ENST00000394536 PTGES3Q15185 160 aaKnown RBP15.49■□□□□ 0.07
PCDH1-203ENST00000394536 C9orf64Q5T6V5 341 aa15.49■□□□□ 0.07
PCDH1-203ENST00000394536 COMMD6Q7Z4G1 85 aa15.49■□□□□ 0.07
PCDH1-203ENST00000394536 IQCF1Q8N6M8 205 aa15.49■□□□□ 0.07
PCDH1-203ENST00000394536 ZFP41Q8N8Y5 198 aa15.49■□□□□ 0.07
PCDH1-203ENST00000394536 USP7Q93009 1102 aa15.49■□□□□ 0.07
PCDH1-203ENST00000394536 NEIL2Q969S2 332 aa15.49■□□□□ 0.07
PCDH1-203ENST00000394536 TESCQ96BS2 214 aa15.49■□□□□ 0.07
PCDH1-203ENST00000394536 CASD1Q96PB1 797 aa15.49■□□□□ 0.07
PCDH1-203ENST00000394536 RNF208Q9H0X6 261 aa15.49■□□□□ 0.07
PCDH1-203ENST00000394536 RDH14Q9HBH5 336 aa15.49■□□□□ 0.07
PCDH1-203ENST00000394536 TMEM39AQ9NV64 488 aa15.49■□□□□ 0.07
PCDH1-203ENST00000394536 PRMT3O60678 531 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 FHP07954 510 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 PDHA2P29803 388 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 GGT2P36268 569 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 NRIP1P48552 1158 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 CTSCP53634 463 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 COX20Q5RI15 118 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 PLEKHS1Q5SXH7 462 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 NEK10Q6ZWH5 1172 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 CELF5Q8N6W0 485 aaKnown RBP15.48■□□□□ 0.07
PCDH1-203ENST00000394536 DTX3Q8N9I9 347 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 SLC43A3Q8NBI5 491 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 LINC01599Q8WXQ3 324 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 ISG20Q96AZ6 181 aaKnown RBP15.48■□□□□ 0.07
PCDH1-203ENST00000394536 OR5M11Q96RB7 305 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 ZNF300Q96RE9 604 aaPredicted RBP15.48■□□□□ 0.07
PCDH1-203ENST00000394536 TRIM45Q9H8W5 580 aaPredicted RBP15.48■□□□□ 0.07
PCDH1-203ENST00000394536 ZDHHC4Q9NPG8 344 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 STOX2Q9P2F5 926 aaPredicted RBP15.48■□□□□ 0.07
PCDH1-203ENST00000394536 CLCA2Q9UQC9 943 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 ERVK-11Q9UQG0 969 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 INHAP05111 366 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms