RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 SERTAD4Q9NUC0 356 aa13□□□□□ -0.33
USP49-203ENST00000394253 PLA2R1Q13018 1463 aa13□□□□□ -0.33
USP49-203ENST00000394253 LACTBL1A8MY62 500 aa13□□□□□ -0.33
USP49-203ENST00000394253 LPLP06858 475 aa13□□□□□ -0.33
USP49-203ENST00000394253 AKR1C4P17516 323 aa13□□□□□ -0.33
USP49-203ENST00000394253 GALNT10Q86SR1 603 aa13□□□□□ -0.33
USP49-203ENST00000394253 RCBTB1Q8NDN9 531 aa13□□□□□ -0.33
USP49-203ENST00000394253 OR5H2Q8NGV7 314 aa13□□□□□ -0.33
USP49-203ENST00000394253 TP63Q9H3D4 680 aaPredicted RBP13□□□□□ -0.33
USP49-203ENST00000394253 MRPS30Q9NP92 439 aaKnown RBP13□□□□□ -0.33
USP49-203ENST00000394253 FNIP2Q9P278 1114 aa13□□□□□ -0.33
USP49-203ENST00000394253 TMEM14AQ9Y6G1 99 aa13□□□□□ -0.33
USP49-203ENST00000394253 FER1L5A0AVI2 2057 aa13□□□□□ -0.33
USP49-203ENST00000394253 RFPL3O75679 317 aa13□□□□□ -0.33
USP49-203ENST00000394253 UBBP0CG47 229 aa13□□□□□ -0.33
USP49-203ENST00000394253 UBCP0CG48 685 aaKnown RBP13□□□□□ -0.33
USP49-203ENST00000394253 XRCC1P18887 633 aaPredicted RBP13□□□□□ -0.33
USP49-203ENST00000394253 ZC3H12AQ5D1E8 599 aaKnown RBP13□□□□□ -0.33
USP49-203ENST00000394253 DNAJC22Q8N4W6 341 aa13□□□□□ -0.33
USP49-203ENST00000394253 OR8K5Q8NH50 307 aa13□□□□□ -0.33
USP49-203ENST00000394253 FAM110BQ8TC76 370 aa13□□□□□ -0.33
USP49-203ENST00000394253 SMPDL3BQ92485 455 aa13□□□□□ -0.33
USP49-203ENST00000394253 OR11A1Q9GZK7 315 aa13□□□□□ -0.33
USP49-203ENST00000394253 POMT1Q9Y6A1 747 aa13□□□□□ -0.33
USP49-203ENST00000394253 KRBOX1C9JBD0 128 aa13□□□□□ -0.33
USP49-203ENST00000394253 GRM6O15303 877 aa13□□□□□ -0.33
USP49-203ENST00000394253 DIRAS1O95057 198 aa13□□□□□ -0.33
USP49-203ENST00000394253 NPBWR1P48145 328 aa13□□□□□ -0.33
USP49-203ENST00000394253 BTG3Q14201 252 aaPredicted RBP13□□□□□ -0.33
USP49-203ENST00000394253 FGFBP1Q14512 234 aa13□□□□□ -0.33
USP49-203ENST00000394253 ZNF781Q8N8C0 355 aa13□□□□□ -0.33
USP49-203ENST00000394253 SLC22A17Q8WUG5 538 aa13□□□□□ -0.33
USP49-203ENST00000394253 DGAT2Q96PD7 388 aa13□□□□□ -0.33
USP49-203ENST00000394253 CYP2S1Q96SQ9 504 aa13□□□□□ -0.33
USP49-203ENST00000394253 SNRNP25Q9BV90 132 aaKnown RBP13□□□□□ -0.33
USP49-203ENST00000394253 SLC19A3Q9BZV2 496 aa13□□□□□ -0.33
USP49-203ENST00000394253 POT1Q9NUX5 634 aa13□□□□□ -0.33
USP49-203ENST00000394253 RIC1Q4ADV7 1423 aa13□□□□□ -0.33
USP49-203ENST00000394253 POLEQ07864 2286 aa13□□□□□ -0.33
USP49-203ENST00000394253 CAPN5O15484 640 aaPredicted RBP12.99□□□□□ -0.33
USP49-203ENST00000394253 KCTD18Q6PI47 426 aaPredicted RBP12.99□□□□□ -0.33
USP49-203ENST00000394253 ZSWIM9Q86XI8 627 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 MAL2Q969L2 176 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 ABCG5Q9H222 651 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 SALL1Q9NSC2 1324 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 A6NHS1 94 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 GOSR2O14653 212 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 SOX30O94993 753 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 DLDP09622 509 aaKnown RBP12.99□□□□□ -0.33
USP49-203ENST00000394253 C7P10643 843 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 IRF5Q13568 498 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 RHBDF2Q6PJF5 856 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 LCN9Q8WX39 176 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 PYURFQ96I23 114 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 OR52B2Q96RD2 323 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 ZIM2Q9NZV7 527 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 TBC1D3DA0A087WVF3 549 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 TBC1D3IA0A087WXS9 549 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 TBC1D3EA0A087X179 549 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 TBC1D3KA0A087X1G2 549 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 TBC1D3FA6NER0 549 aaPredicted RBP12.99□□□□□ -0.33
USP49-203ENST00000394253 TBC1D3LB9A6J9 549 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 TBC1D3HP0C7X1 549 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 GUK1Q16774 197 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 TBC1D3GQ6DHY5 549 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 TBC1D3CQ6IPX1 549 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 TBC1D3Q8IZP1 549 aaPredicted RBP12.99□□□□□ -0.33
USP49-203ENST00000394253 PRELID2Q8N945 189 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 BCAS3Q9H6U6 928 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 LDAHQ9H6V9 325 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 TOX4O94842 621 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 ACTR1AP61163 376 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 ARHGAP19Q14CB8 494 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 FAM111BQ6SJ93 734 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 FAM84BQ96KN1 310 aaPredicted RBP12.99□□□□□ -0.33
USP49-203ENST00000394253 MRI1Q9BV20 369 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 ABRACLQ9P1F3 81 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 TUBAL3A6NHL2 446 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 TLX2O43763 284 aaPredicted RBP12.99□□□□□ -0.33
USP49-203ENST00000394253 CLEC3AO75596 197 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 PITPNBP48739 271 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 GAD2Q05329 585 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 TROAPQ12815 778 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 DSC3Q14574 896 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 GPR142Q7Z601 462 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 AVL9Q8NBF6 648 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 LGMNQ99538 433 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 FAM83CQ9BQN1 747 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 OSER1Q9NX31 292 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 ERVW-1Q9UQF0 538 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 CYTIPO60759 359 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 EPHX2P34913 555 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 NOMO2Q5JPE7 1267 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 RASGEF1CQ8N431 466 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 HNRNPABQ99729 332 aaKnown RBP12.99□□□□□ -0.33
USP49-203ENST00000394253 NCDNQ9UBB6 729 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 LGALS13Q9UHV8 139 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 UBFD1O14562 309 aaKnown RBP12.99□□□□□ -0.33
USP49-203ENST00000394253 RETP07949 1114 aa12.99□□□□□ -0.33
USP49-203ENST00000394253 CREB1P16220 341 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms