RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 CHI3L1P36222 383 aaPredicted RBP15.72■□□□□ 0.11
PHTF1-205ENST00000393357 MAGEA2P43356 314 aa15.72■□□□□ 0.11
PHTF1-205ENST00000393357 AVPR1BP47901 424 aa15.72■□□□□ 0.11
PHTF1-205ENST00000393357 ATAT1Q5SQI0 421 aa15.72■□□□□ 0.11
PHTF1-205ENST00000393357 TNFAIP8L2Q6P589 184 aaPredicted RBP15.72■□□□□ 0.11
PHTF1-205ENST00000393357 FAM109AQ8N4B1 249 aa15.72■□□□□ 0.11
PHTF1-205ENST00000393357 BEST4Q8NFU0 473 aa15.72■□□□□ 0.11
PHTF1-205ENST00000393357 OPALINQ96PE5 141 aa15.72■□□□□ 0.11
PHTF1-205ENST00000393357 TRIM62Q9BVG3 475 aa15.72■□□□□ 0.11
PHTF1-205ENST00000393357 C12orf4Q9NQ89 552 aa15.72■□□□□ 0.11
PHTF1-205ENST00000393357 IL20RAQ9UHF4 553 aa15.72■□□□□ 0.11
PHTF1-205ENST00000393357 SSR3Q9UNL2 185 aa15.72■□□□□ 0.11
PHTF1-205ENST00000393357 SATB2Q9UPW6 733 aa15.72■□□□□ 0.11
PHTF1-205ENST00000393357 ZXDCQ2QGD7 858 aaPredicted RBP15.72■□□□□ 0.11
PHTF1-205ENST00000393357 YIF1BQ5BJH7 314 aa15.72■□□□□ 0.11
PHTF1-205ENST00000393357 IL20RBQ6UXL0 311 aa15.72■□□□□ 0.11
PHTF1-205ENST00000393357 SERPINA13PQ6UXR4 307 aa15.72■□□□□ 0.11
PHTF1-205ENST00000393357 GALNT7Q86SF2 657 aa15.72■□□□□ 0.11
PHTF1-205ENST00000393357 PDZD3Q86UT5 571 aa15.72■□□□□ 0.11
PHTF1-205ENST00000393357 TMC8Q8IU68 726 aa15.72■□□□□ 0.11
PHTF1-205ENST00000393357 KNL1Q8NG31 2342 aa15.71■□□□□ 0.11
PHTF1-205ENST00000393357 LOC105371267A0A1B0GV96 52 aa15.71■□□□□ 0.11
PHTF1-205ENST00000393357 CASKO14936 926 aa15.71■□□□□ 0.11
PHTF1-205ENST00000393357 SEPT4O43236 478 aa15.71■□□□□ 0.11
PHTF1-205ENST00000393357 CH25HO95992 272 aa15.71■□□□□ 0.11
PHTF1-205ENST00000393357 ANXA4P09525 319 aaPredicted RBP15.71■□□□□ 0.11
PHTF1-205ENST00000393357 SLX4IPQ5VYV7 408 aa15.71■□□□□ 0.11
PHTF1-205ENST00000393357 SAXO2Q658L1 398 aa15.71■□□□□ 0.11
PHTF1-205ENST00000393357 Q8N402 240 aa15.71■□□□□ 0.11
PHTF1-205ENST00000393357 RAB8BQ92930 207 aa15.71■□□□□ 0.11
PHTF1-205ENST00000393357 C7orf34Q96L11 122 aa15.71■□□□□ 0.11
PHTF1-205ENST00000393357 C8orf48Q96LL4 319 aa15.71■□□□□ 0.11
PHTF1-205ENST00000393357 TMED9Q9BVK6 235 aa15.71■□□□□ 0.11
PHTF1-205ENST00000393357 VPS9D1Q9Y2B5 631 aa15.71■□□□□ 0.11
PHTF1-205ENST00000393357 PRAMEF33A0A0G2JMD5 474 aa15.71■□□□□ 0.11
PHTF1-205ENST00000393357 C2orf92A0A1B0GVN3 265 aa15.71■□□□□ 0.11
PHTF1-205ENST00000393357 HPGDSO60760 199 aa15.71■□□□□ 0.11
PHTF1-205ENST00000393357 PRAMEF10O60809 474 aa15.71■□□□□ 0.11
PHTF1-205ENST00000393357 PRAMEF4O60810 478 aa15.71■□□□□ 0.11
PHTF1-205ENST00000393357 TP53P04637 393 aaPredicted RBP15.71■□□□□ 0.11
PHTF1-205ENST00000393357 CHMP24386 653 aa15.71■□□□□ 0.11
PHTF1-205ENST00000393357 CCT3P49368 545 aaKnown RBP15.71■□□□□ 0.11
PHTF1-205ENST00000393357 OLR1P78380 273 aa15.71■□□□□ 0.11
PHTF1-205ENST00000393357 EIF4EBP2Q13542 120 aaPredicted RBP15.71■□□□□ 0.11
PHTF1-205ENST00000393357 TIMM50Q3ZCQ8 353 aa15.71■□□□□ 0.11
PHTF1-205ENST00000393357 CPTPQ5TA50 214 aa15.71■□□□□ 0.11
PHTF1-205ENST00000393357 PRAMEF9Q5VWM5 478 aa15.71■□□□□ 0.11
PHTF1-205ENST00000393357 C16orf62Q7Z3J2 963 aa15.71■□□□□ 0.11
PHTF1-205ENST00000393357 RBM45Q8IUH3 476 aaKnown RBP15.71■□□□□ 0.11
PHTF1-205ENST00000393357 MMP21Q8N119 569 aa15.71■□□□□ 0.11
PHTF1-205ENST00000393357 SLC37A3Q8NCC5 494 aa15.71■□□□□ 0.11
PHTF1-205ENST00000393357 MYLIPQ8WY64 445 aa15.71■□□□□ 0.11
PHTF1-205ENST00000393357 PSKH2Q96QS6 385 aa15.71■□□□□ 0.11
PHTF1-205ENST00000393357 SRRQ9GZT4 340 aa15.71■□□□□ 0.11
PHTF1-205ENST00000393357 ZFYVE1Q9HBF4 777 aa15.71■□□□□ 0.11
PHTF1-205ENST00000393357 SNX11Q9Y5W9 270 aa15.71■□□□□ 0.11
PHTF1-205ENST00000393357 CCL15-CCL14A0A0B4J2E2 113 aa15.7■□□□□ 0.1
PHTF1-205ENST00000393357 GABRR3A8MPY1 467 aa15.7■□□□□ 0.1
PHTF1-205ENST00000393357 CSO75390 466 aaKnown RBP15.7■□□□□ 0.1
PHTF1-205ENST00000393357 TSPAN9O75954 239 aa15.7■□□□□ 0.1
PHTF1-205ENST00000393357 C6orf47O95873 294 aa15.7■□□□□ 0.1
PHTF1-205ENST00000393357 ZNF865P0CJ78 1059 aaPredicted RBP15.7■□□□□ 0.1
PHTF1-205ENST00000393357 EPORP19235 508 aa15.7■□□□□ 0.1
PHTF1-205ENST00000393357 CSNK1DP48730 415 aa15.7■□□□□ 0.1
PHTF1-205ENST00000393357 CTBP2P56545 445 aa15.7■□□□□ 0.1
PHTF1-205ENST00000393357 CCL15Q16663 113 aa15.7■□□□□ 0.1
PHTF1-205ENST00000393357 FAM205BPQ63HN1 556 aa15.7■□□□□ 0.1
PHTF1-205ENST00000393357 RNF130Q86XS8 419 aa15.7■□□□□ 0.1
PHTF1-205ENST00000393357 ZNF683Q8IZ20 524 aa15.7■□□□□ 0.1
PHTF1-205ENST00000393357 OR4M1Q8NGD0 313 aa15.7■□□□□ 0.1
PHTF1-205ENST00000393357 WBP2Q969T9 261 aa15.7■□□□□ 0.1
PHTF1-205ENST00000393357 MED30Q96HR3 178 aa15.7■□□□□ 0.1
PHTF1-205ENST00000393357 C1orf74Q96LT6 269 aa15.7■□□□□ 0.1
PHTF1-205ENST00000393357 DOHHQ9BU89 302 aa15.7■□□□□ 0.1
PHTF1-205ENST00000393357 C1QTNF3Q9BXJ4 246 aa15.7■□□□□ 0.1
PHTF1-205ENST00000393357 KATNBL1Q9H079 304 aa15.7■□□□□ 0.1
PHTF1-205ENST00000393357 CCDC59Q9P031 241 aaKnown RBP15.7■□□□□ 0.1
PHTF1-205ENST00000393357 C5AR2Q9P296 337 aa15.7■□□□□ 0.1
PHTF1-205ENST00000393357 TMCC3Q9ULS5 477 aa15.7■□□□□ 0.1
PHTF1-205ENST00000393357 PARP14Q460N5 1801 aa15.7■□□□□ 0.1
PHTF1-205ENST00000393357 PDE9AO76083 593 aa15.7■□□□□ 0.1
PHTF1-205ENST00000393357 TYMPP19971 482 aa15.7■□□□□ 0.1
PHTF1-205ENST00000393357 ALG1LQ6GMV1 187 aa15.7■□□□□ 0.1
PHTF1-205ENST00000393357 FAHD1Q6P587 224 aa15.7■□□□□ 0.1
PHTF1-205ENST00000393357 LHFPL3Q86UP9 236 aa15.7■□□□□ 0.1
PHTF1-205ENST00000393357 SIMC1Q8NDZ2 872 aa15.7■□□□□ 0.1
PHTF1-205ENST00000393357 TSPAN18Q96SJ8 248 aa15.7■□□□□ 0.1
PHTF1-205ENST00000393357 IL26Q9NPH9 171 aa15.7■□□□□ 0.1
PHTF1-205ENST00000393357 NKIRAS2Q9NYR9 191 aa15.7■□□□□ 0.1
PHTF1-205ENST00000393357 FLRT1Q9NZU1 646 aa15.7■□□□□ 0.1
PHTF1-205ENST00000393357 PCDHGA2Q9Y5H1 932 aa15.7■□□□□ 0.1
PHTF1-205ENST00000393357 HSPE1-MOB4S4R3N1 261 aa15.7■□□□□ 0.1
PHTF1-205ENST00000393357 DOCK1Q14185 1865 aa15.7■□□□□ 0.1
PHTF1-205ENST00000393357 PRAMEF25A6NGN4 478 aa15.7■□□□□ 0.1
PHTF1-205ENST00000393357 ETHE1O95571 254 aa15.7■□□□□ 0.1
PHTF1-205ENST00000393357 GSTM1P09488 218 aa15.7■□□□□ 0.1
PHTF1-205ENST00000393357 EBLN1P0CF75 366 aa15.7■□□□□ 0.1
PHTF1-205ENST00000393357 ITGALP20701 1170 aa15.7■□□□□ 0.1
PHTF1-205ENST00000393357 MRPS6P82932 125 aaKnown RBP15.7■□□□□ 0.1
PHTF1-205ENST00000393357 RPL6Q02878 288 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms