RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 ACSS2Q9NR19 701 aa14.28□□□□□ -0.12
CCDC50-201ENST00000392455 CYP8B1Q9UNU6 501 aa14.28□□□□□ -0.12
CCDC50-201ENST00000392455 PRR5-ARHGAP8B1AHC4 643 aa14.28□□□□□ -0.12
CCDC50-201ENST00000392455 RTP1P59025 263 aa14.28□□□□□ -0.12
CCDC50-201ENST00000392455 ARHGAP8P85298 464 aa14.28□□□□□ -0.12
CCDC50-201ENST00000392455 SLC2A7Q6PXP3 512 aa14.28□□□□□ -0.12
CCDC50-201ENST00000392455 TMEM205Q6UW68 189 aa14.28□□□□□ -0.12
CCDC50-201ENST00000392455 SEZ6LQ9BYH1 1024 aa14.28□□□□□ -0.12
CCDC50-201ENST00000392455 GPR89AB7ZAQ6 455 aa14.27□□□□□ -0.12
CCDC50-201ENST00000392455 MPPED1O15442 326 aa14.27□□□□□ -0.12
CCDC50-201ENST00000392455 OIP5O43482 229 aa14.27□□□□□ -0.12
CCDC50-201ENST00000392455 EPHX1P07099 455 aa14.27□□□□□ -0.12
CCDC50-201ENST00000392455 GPR89BP0CG08 455 aa14.27□□□□□ -0.12
CCDC50-201ENST00000392455 PITPNBP48739 271 aa14.27□□□□□ -0.12
CCDC50-201ENST00000392455 TAF1AQ15573 450 aaPredicted RBP14.27□□□□□ -0.12
CCDC50-201ENST00000392455 ZBTB46Q86UZ6 589 aa14.27□□□□□ -0.12
CCDC50-201ENST00000392455 PRELID2Q8N945 189 aa14.27□□□□□ -0.12
CCDC50-201ENST00000392455 WFIKKN2Q8TEU8 576 aa14.27□□□□□ -0.12
CCDC50-201ENST00000392455 RIMBP3CA6NJZ7 1639 aa14.27□□□□□ -0.12
CCDC50-201ENST00000392455 RIMBP3BA6NNM3 1639 aa14.27□□□□□ -0.12
CCDC50-201ENST00000392455 RIMBP3Q9UFD9 1639 aa14.27□□□□□ -0.12
CCDC50-201ENST00000392455 COL5A2P05997 1499 aaPredicted RBP14.27□□□□□ -0.12
CCDC50-201ENST00000392455 PFKLP17858 780 aa14.27□□□□□ -0.12
CCDC50-201ENST00000392455 CPT2P23786 658 aa14.27□□□□□ -0.12
CCDC50-201ENST00000392455 KRBOX4Q5JUW0 171 aa14.27□□□□□ -0.12
CCDC50-201ENST00000392455 TMPRSS7Q7RTY8 843 aa14.27□□□□□ -0.12
CCDC50-201ENST00000392455 CARM1Q86X55 608 aa14.27□□□□□ -0.12
CCDC50-201ENST00000392455 PDSS2Q86YH6 399 aa14.27□□□□□ -0.12
CCDC50-201ENST00000392455 MARCH9Q86YJ5 346 aa14.27□□□□□ -0.12
CCDC50-201ENST00000392455 LILRB2Q8N423 598 aa14.27□□□□□ -0.12
CCDC50-201ENST00000392455 THEM6Q8WUY1 208 aa14.27□□□□□ -0.12
CCDC50-201ENST00000392455 STON2Q8WXE9 905 aa14.27□□□□□ -0.12
CCDC50-201ENST00000392455 SLC25A51Q9H1U9 297 aa14.27□□□□□ -0.12
CCDC50-201ENST00000392455 SLCO1B3Q9NPD5 702 aa14.27□□□□□ -0.12
CCDC50-201ENST00000392455 SAGE1Q9NXZ1 904 aa14.27□□□□□ -0.12
CCDC50-201ENST00000392455 BRINP1O60477 761 aa14.27□□□□□ -0.12
CCDC50-201ENST00000392455 C7P10643 843 aa14.27□□□□□ -0.12
CCDC50-201ENST00000392455 GHRHRQ02643 423 aa14.27□□□□□ -0.12
CCDC50-201ENST00000392455 RNF215Q9Y6U7 377 aa14.27□□□□□ -0.12
CCDC50-201ENST00000392455 TP53I11O14683 189 aa14.27□□□□□ -0.13
CCDC50-201ENST00000392455 PRMT2P55345 433 aa14.27□□□□□ -0.13
CCDC50-201ENST00000392455 FBXO22Q8NEZ5 403 aa14.27□□□□□ -0.13
CCDC50-201ENST00000392455 SHDQ96IW2 340 aa14.27□□□□□ -0.13
CCDC50-201ENST00000392455 HYLS1Q96M11 299 aa14.27□□□□□ -0.13
CCDC50-201ENST00000392455 PELOQ9BRX2 385 aaKnown RBP14.27□□□□□ -0.13
CCDC50-201ENST00000392455 CCM2Q9BSQ5 444 aa14.27□□□□□ -0.13
CCDC50-201ENST00000392455 CHRAC1Q9NRG0 131 aa14.27□□□□□ -0.13
CCDC50-201ENST00000392455 MGAT4CQ9UBM8 478 aa14.27□□□□□ -0.13
CCDC50-201ENST00000392455 KCNJ13O60928 360 aa14.27□□□□□ -0.13
CCDC50-201ENST00000392455 NELFEP18615 380 aaKnown RBP14.27□□□□□ -0.13
CCDC50-201ENST00000392455 DSTNP60981 165 aa14.27□□□□□ -0.13
CCDC50-201ENST00000392455 GSTM4Q03013 218 aa14.27□□□□□ -0.13
CCDC50-201ENST00000392455 DAG1Q14118 895 aa14.27□□□□□ -0.13
CCDC50-201ENST00000392455 CLVS2Q5SYC1 327 aa14.27□□□□□ -0.13
CCDC50-201ENST00000392455 ZNF367Q7RTV3 350 aa14.27□□□□□ -0.13
CCDC50-201ENST00000392455 ZSWIM9Q86XI8 627 aa14.27□□□□□ -0.13
CCDC50-201ENST00000392455 SMIM35A0A1B0GVV1 85 aa14.27□□□□□ -0.13
CCDC50-201ENST00000392455 MPSTP25325 297 aa14.27□□□□□ -0.13
CCDC50-201ENST00000392455 DGKGP49619 791 aa14.27□□□□□ -0.13
CCDC50-201ENST00000392455 DSC3Q14574 896 aa14.27□□□□□ -0.13
CCDC50-201ENST00000392455 C14orf28Q4W4Y0 310 aa14.27□□□□□ -0.13
CCDC50-201ENST00000392455 RGMBQ6NW40 437 aa14.27□□□□□ -0.13
CCDC50-201ENST00000392455 GLYATL2Q8WU03 294 aa14.27□□□□□ -0.13
CCDC50-201ENST00000392455 KCTD13Q8WZ19 329 aa14.27□□□□□ -0.13
CCDC50-201ENST00000392455 FAM163AQ96GL9 167 aaPredicted RBP14.27□□□□□ -0.13
CCDC50-201ENST00000392455 BCL9O00512 1426 aa14.27□□□□□ -0.13
CCDC50-201ENST00000392455 A0A1W2PPM1 405 aa14.26□□□□□ -0.13
CCDC50-201ENST00000392455 PROM1O43490 865 aa14.26□□□□□ -0.13
CCDC50-201ENST00000392455 STK17BO94768 372 aa14.26□□□□□ -0.13
CCDC50-201ENST00000392455 ENTPD1P49961 510 aa14.26□□□□□ -0.13
CCDC50-201ENST00000392455 LINGO4Q6UY18 593 aa14.26□□□□□ -0.13
CCDC50-201ENST00000392455 TMEM156Q8N614 296 aa14.26□□□□□ -0.13
CCDC50-201ENST00000392455 ITFG2Q969R8 447 aa14.26□□□□□ -0.13
CCDC50-201ENST00000392455 HAPLN3Q96S86 360 aa14.26□□□□□ -0.13
CCDC50-201ENST00000392455 TMEM209Q96SK2 561 aa14.26□□□□□ -0.13
CCDC50-201ENST00000392455 UBE2J1Q9Y385 318 aaPredicted RBP14.26□□□□□ -0.13
CCDC50-201ENST00000392455 PCDHB14Q9Y5E9 798 aa14.26□□□□□ -0.13
CCDC50-201ENST00000392455 A0A087WUU8 490 aa14.26□□□□□ -0.13
CCDC50-201ENST00000392455 ADAM10O14672 748 aa14.26□□□□□ -0.13
CCDC50-201ENST00000392455 FAM155BO75949 473 aa14.26□□□□□ -0.13
CCDC50-201ENST00000392455 RUNX2Q13950 521 aa14.26□□□□□ -0.13
CCDC50-201ENST00000392455 CMIPQ8IY22 773 aa14.26□□□□□ -0.13
CCDC50-201ENST00000392455 DUS2Q9NX74 493 aaKnown RBP14.26□□□□□ -0.13
CCDC50-201ENST00000392455 TULP2O00295 520 aa14.26□□□□□ -0.13
CCDC50-201ENST00000392455 RDH16O75452 317 aa14.26□□□□□ -0.13
CCDC50-201ENST00000392455 RPS14P62263 151 aaKnown RBP14.26□□□□□ -0.13
CCDC50-201ENST00000392455 SERINC3Q13530 473 aa14.26□□□□□ -0.13
CCDC50-201ENST00000392455 UBE2J2Q8N2K1 259 aa14.26□□□□□ -0.13
CCDC50-201ENST00000392455 DNAJC19Q96DA6 116 aa14.26□□□□□ -0.13
CCDC50-201ENST00000392455 CMTM7Q96FZ5 175 aa14.26□□□□□ -0.13
CCDC50-201ENST00000392455 ACTRT3Q9BYD9 372 aa14.26□□□□□ -0.13
CCDC50-201ENST00000392455 NMUR1Q9HB89 426 aa14.26□□□□□ -0.13
CCDC50-201ENST00000392455 ENAMQ9NRM1 1142 aa14.26□□□□□ -0.13
CCDC50-201ENST00000392455 SMCO4Q9NRQ5 59 aa14.26□□□□□ -0.13
CCDC50-201ENST00000392455 FAIMQ9NVQ4 179 aa14.26□□□□□ -0.13
CCDC50-201ENST00000392455 SLC17A7Q9P2U7 560 aa14.26□□□□□ -0.13
CCDC50-201ENST00000392455 NENFQ9UMX5 172 aa14.26□□□□□ -0.13
CCDC50-201ENST00000392455 CA5BQ9Y2D0 317 aa14.26□□□□□ -0.13
CCDC50-201ENST00000392455 OR4Q2P0C623 313 aa14.26□□□□□ -0.13
CCDC50-201ENST00000392455 TMED9Q9BVK6 235 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms