RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 GTF2H2Q13888 395 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 EXT1Q16394 746 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 NADK2Q4G0N4 442 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 C10orf62Q5T681 223 aaPredicted RBP11.94□□□□□ -0.5
GGPS1-203ENST00000391855 SLC6A19Q695T7 634 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 PLAG1Q6DJT9 500 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 GTF2H2CQ6P1K8 395 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 ABHD17CQ6PCB6 329 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 ISLR2Q6UXK2 745 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 VN1R5Q7Z5H4 357 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 ANKRD37Q7Z713 158 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 GSPT2Q8IYD1 628 aaKnown RBP11.94□□□□□ -0.5
GGPS1-203ENST00000391855 CA13Q8N1Q1 262 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 RBMXL3Q8N7X1 1067 aaKnown RBP11.94□□□□□ -0.5
GGPS1-203ENST00000391855 ARMC2Q8NEN0 867 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 OR7G3Q8NG95 312 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 ZNF473Q8WTR7 871 aaKnown RBP11.94□□□□□ -0.5
GGPS1-203ENST00000391855 IMMP1LQ96LU5 166 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 KCNC2Q96PR1 638 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 LMF1Q96S06 567 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 SERINC2Q96SA4 455 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 LPAR4Q99677 370 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 WDR77Q9BQA1 342 aaPredicted RBP11.94□□□□□ -0.5
GGPS1-203ENST00000391855 RBCK1Q9BYM8 510 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 AICDAQ9GZX7 198 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 KLHL31Q9H511 634 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 PRM3Q9NNZ6 103 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 SLAMF7Q9NQ25 335 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 TEKT2Q9UIF3 430 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 PCDHGA11Q9Y5H2 935 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 TNRC6AQ8NDV7 1962 aaKnown RBP11.93□□□□□ -0.5
GGPS1-203ENST00000391855 C4orf51C9J302 202 aa11.93□□□□□ -0.5
GGPS1-203ENST00000391855 H0YIV9 168 aa11.93□□□□□ -0.5
GGPS1-203ENST00000391855 MASP2O00187 686 aa11.93□□□□□ -0.5
GGPS1-203ENST00000391855 UQCRHP07919 91 aa11.93□□□□□ -0.5
GGPS1-203ENST00000391855 GSTA1P08263 222 aa11.93□□□□□ -0.5
GGPS1-203ENST00000391855 PCNAP12004 261 aa11.93□□□□□ -0.5
GGPS1-203ENST00000391855 TAC1P20366 129 aa11.93□□□□□ -0.5
GGPS1-203ENST00000391855 SOX11P35716 441 aa11.93□□□□□ -0.5
GGPS1-203ENST00000391855 PIK3CBP42338 1070 aa11.93□□□□□ -0.5
GGPS1-203ENST00000391855 TSFMP43897 325 aaKnown RBP11.93□□□□□ -0.5
GGPS1-203ENST00000391855 EFNA3P52797 238 aa11.93□□□□□ -0.5
GGPS1-203ENST00000391855 BTN3A2P78410 334 aa11.93□□□□□ -0.5
GGPS1-203ENST00000391855 Q0VFX4 171 aa11.93□□□□□ -0.5
GGPS1-203ENST00000391855 ABRAXAS2Q15018 415 aa11.93□□□□□ -0.5
GGPS1-203ENST00000391855 NSDHLQ15738 373 aa11.93□□□□□ -0.5
GGPS1-203ENST00000391855 Q6ZS92 163 aa11.93□□□□□ -0.5
GGPS1-203ENST00000391855 CHSY3Q70JA7 882 aa11.93□□□□□ -0.5
GGPS1-203ENST00000391855 GOLGA7Q7Z5G4 137 aa11.93□□□□□ -0.5
GGPS1-203ENST00000391855 ATCAYQ86WG3 371 aa11.93□□□□□ -0.5
GGPS1-203ENST00000391855 MYLK4Q86YV6 388 aaPredicted RBP11.93□□□□□ -0.5
GGPS1-203ENST00000391855 L3MBTL4Q8NA19 623 aa11.93□□□□□ -0.5
GGPS1-203ENST00000391855 C7orf57Q8NEG2 295 aa11.93□□□□□ -0.5
GGPS1-203ENST00000391855 UBLCP1Q8WVY7 318 aaPredicted RBP11.93□□□□□ -0.5
GGPS1-203ENST00000391855 CMTM7Q96FZ5 175 aa11.93□□□□□ -0.5
GGPS1-203ENST00000391855 QRFPRQ96P65 431 aa11.93□□□□□ -0.5
GGPS1-203ENST00000391855 MESP1Q9BRJ9 268 aa11.93□□□□□ -0.5
GGPS1-203ENST00000391855 TBCDQ9BTW9 1192 aa11.93□□□□□ -0.5
GGPS1-203ENST00000391855 EPB41L4BQ9H329 900 aa11.93□□□□□ -0.5
GGPS1-203ENST00000391855 IPPKQ9H8X2 491 aa11.93□□□□□ -0.5
GGPS1-203ENST00000391855 PRDM9Q9NQV7 894 aa11.93□□□□□ -0.5
GGPS1-203ENST00000391855 ZNF358Q9NW07 568 aa11.93□□□□□ -0.5
GGPS1-203ENST00000391855 B3GNT3Q9Y2A9 372 aa11.93□□□□□ -0.5
GGPS1-203ENST00000391855 SPACA6W5XKT8 324 aa11.93□□□□□ -0.5
GGPS1-203ENST00000391855 SCN3AQ9NY46 2000 aa11.92□□□□□ -0.5
GGPS1-203ENST00000391855 CFAP46Q8IYW2 2715 aa11.92□□□□□ -0.5
GGPS1-203ENST00000391855 BLACEA4D250 179 aa11.92□□□□□ -0.5
GGPS1-203ENST00000391855 TTLL8A6PVC2 850 aa11.92□□□□□ -0.5
GGPS1-203ENST00000391855 E2F3O00716 465 aa11.92□□□□□ -0.5
GGPS1-203ENST00000391855 CLDN4O14493 209 aa11.92□□□□□ -0.5
GGPS1-203ENST00000391855 PRMT3O60678 531 aa11.92□□□□□ -0.5
GGPS1-203ENST00000391855 CDC123O75794 336 aaPredicted RBP11.92□□□□□ -0.5
GGPS1-203ENST00000391855 SCELO95171 688 aa11.92□□□□□ -0.5
GGPS1-203ENST00000391855 SLU7O95391 586 aaKnown RBP11.92□□□□□ -0.5
GGPS1-203ENST00000391855 CLDN9O95484 217 aa11.92□□□□□ -0.5
GGPS1-203ENST00000391855 TBX6O95947 436 aaPredicted RBP11.92□□□□□ -0.5
GGPS1-203ENST00000391855 B3GALT4O96024 378 aa11.92□□□□□ -0.5
GGPS1-203ENST00000391855 MYBL2P10244 700 aa11.92□□□□□ -0.5
GGPS1-203ENST00000391855 EEF1DP29692 281 aaKnown RBP11.92□□□□□ -0.5
GGPS1-203ENST00000391855 PLA2G16P53816 162 aa11.92□□□□□ -0.5
GGPS1-203ENST00000391855 HSD17B7P56937 341 aa11.92□□□□□ -0.5
GGPS1-203ENST00000391855 OR4D2P58180 307 aa11.92□□□□□ -0.5
GGPS1-203ENST00000391855 ACTN3Q08043 901 aaPredicted RBP11.92□□□□□ -0.5
GGPS1-203ENST00000391855 RASA2Q15283 850 aa11.92□□□□□ -0.5
GGPS1-203ENST00000391855 SFT2D3Q587I9 215 aa11.92□□□□□ -0.5
GGPS1-203ENST00000391855 B3GNTL1Q67FW5 361 aaPredicted RBP11.92□□□□□ -0.5
GGPS1-203ENST00000391855 PAPD4Q6PIY7 484 aaKnown RBP11.92□□□□□ -0.5
GGPS1-203ENST00000391855 LANCL3Q6ZV70 420 aa11.92□□□□□ -0.5
GGPS1-203ENST00000391855 TDRPQ86YL5 185 aa11.92□□□□□ -0.5
GGPS1-203ENST00000391855 IQCKQ8N0W5 287 aa11.92□□□□□ -0.5
GGPS1-203ENST00000391855 M1APQ8TC57 530 aa11.92□□□□□ -0.5
GGPS1-203ENST00000391855 ATP6V1E2Q96A05 226 aa11.92□□□□□ -0.5
GGPS1-203ENST00000391855 PTCHD1Q96NR3 888 aa11.92□□□□□ -0.5
GGPS1-203ENST00000391855 C1QTNF3Q9BXJ4 246 aa11.92□□□□□ -0.5
GGPS1-203ENST00000391855 TRIM4Q9C037 500 aa11.92□□□□□ -0.5
GGPS1-203ENST00000391855 ILKAPQ9H0C8 392 aaPredicted RBP11.92□□□□□ -0.5
GGPS1-203ENST00000391855 MMP25Q9NPA2 562 aa11.92□□□□□ -0.5
GGPS1-203ENST00000391855 PSD3Q9NYI0 1048 aa11.92□□□□□ -0.5
GGPS1-203ENST00000391855 PCTPQ9UKL6 214 aa11.92□□□□□ -0.5
GGPS1-203ENST00000391855 PPT2Q9UMR5 302 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms