RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 SLC2A2P11168 524 aaPredicted RBP14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 S100A3P33764 101 aa14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 PIK3CGP48736 1102 aa14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 RENBPP51606 427 aa14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 GBX2P52951 348 aaPredicted RBP14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 SLC10A7Q0GE19 358 aa14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 IRF5Q13568 498 aa14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 GTF2H2Q13888 395 aa14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 NFE2L1Q14494 772 aa14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 COL28A1Q2UY09 1125 aa14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 USP39Q53GS9 565 aaKnown RBP14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 ZNF628Q5EBL2 1059 aa14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 RAB41Q5JT25 222 aa14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 MANEALQ5VSG8 457 aa14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 TRIQKQ629K1 86 aa14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 GTF2H2CQ6P1K8 395 aa14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 ERICH5Q6P6B1 374 aa14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 CLDN22Q8N7P3 220 aa14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 OR8K5Q8NH50 307 aa14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 MYLPFQ96A32 169 aa14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 ZFP64Q9NPA5 681 aa14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 ASIC5Q9NY37 505 aa14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 RIMKLBQ9ULI2 386 aa14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 PTCH2Q9Y6C5 1203 aa14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 GBF1Q92538 1859 aa14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 SCN10AQ9Y5Y9 1956 aa14.08□□□□□ -0.15
VPS9D1-201ENST00000389386 A0A1W2PRG6 482 aa14.08□□□□□ -0.15
VPS9D1-201ENST00000389386 INMT-MINDY4F8WBC2 141 aa14.08□□□□□ -0.15
VPS9D1-201ENST00000389386 FKTNO75072 461 aa14.08□□□□□ -0.15
VPS9D1-201ENST00000389386 IL1AP01583 271 aa14.08□□□□□ -0.15
VPS9D1-201ENST00000389386 INHAP05111 366 aa14.08□□□□□ -0.15
VPS9D1-201ENST00000389386 OR4Q2P0C623 313 aa14.08□□□□□ -0.15
VPS9D1-201ENST00000389386 BCKDHAP12694 445 aa14.08□□□□□ -0.15
VPS9D1-201ENST00000389386 CDH18Q13634 790 aa14.08□□□□□ -0.15
VPS9D1-201ENST00000389386 PCBP2Q15366 365 aaKnown RBP eCLIP14.08□□□□□ -0.156e-6■■■■□ 19.3
VPS9D1-201ENST00000389386 Q8N402 240 aa14.08□□□□□ -0.15
VPS9D1-201ENST00000389386 SIDT2Q8NBJ9 832 aaKnown RBP14.08□□□□□ -0.15
VPS9D1-201ENST00000389386 OR52H1Q8NGJ2 320 aa14.08□□□□□ -0.15
VPS9D1-201ENST00000389386 RBPMSQ93062 196 aaKnown RBP14.08□□□□□ -0.15
VPS9D1-201ENST00000389386 LINGO1Q96FE5 620 aa14.08□□□□□ -0.15
VPS9D1-201ENST00000389386 TPD52L3Q96J77 140 aa14.08□□□□□ -0.15
VPS9D1-201ENST00000389386 KLHL5Q96PQ7 755 aa14.08□□□□□ -0.15
VPS9D1-201ENST00000389386 CD244Q9BZW8 370 aa14.08□□□□□ -0.15
VPS9D1-201ENST00000389386 PIGUQ9H490 435 aa14.08□□□□□ -0.15
VPS9D1-201ENST00000389386 PPP1R3EQ9H7J1 279 aa14.08□□□□□ -0.15
VPS9D1-201ENST00000389386 IPPKQ9H8X2 491 aa14.08□□□□□ -0.15
VPS9D1-201ENST00000389386 CUEDC1Q9NWM3 386 aaPredicted RBP14.08□□□□□ -0.15
VPS9D1-201ENST00000389386 PCDHGB7Q9Y5F8 929 aa14.08□□□□□ -0.15
VPS9D1-201ENST00000389386 CSNK1G3Q9Y6M4 447 aa14.08□□□□□ -0.15
VPS9D1-201ENST00000389386 NUP214P35658 2090 aaPredicted RBP14.08□□□□□ -0.16
VPS9D1-201ENST00000389386 SH3D21A4FU49 640 aa14.08□□□□□ -0.16
VPS9D1-201ENST00000389386 OTCP00480 354 aa14.08□□□□□ -0.16
VPS9D1-201ENST00000389386 CKMT1AP12532 417 aa14.08□□□□□ -0.16
VPS9D1-201ENST00000389386 CCT3P49368 545 aaKnown RBP14.08□□□□□ -0.16
VPS9D1-201ENST00000389386 PGFP49763 221 aa14.08□□□□□ -0.16
VPS9D1-201ENST00000389386 KLHL12Q53G59 568 aa14.08□□□□□ -0.16
VPS9D1-201ENST00000389386 TSEN54Q7Z6J9 526 aaKnown RBP14.08□□□□□ -0.16
VPS9D1-201ENST00000389386 LRRTM3Q86VH5 581 aa14.08□□□□□ -0.16
VPS9D1-201ENST00000389386 TRIM69Q86WT6 500 aa14.08□□□□□ -0.16
VPS9D1-201ENST00000389386 PTOV1Q86YD1 416 aa14.08□□□□□ -0.16
VPS9D1-201ENST00000389386 ST8SIA4Q92187 359 aa14.08□□□□□ -0.16
VPS9D1-201ENST00000389386 SAMD11Q96NU1 681 aa14.08□□□□□ -0.16
VPS9D1-201ENST00000389386 ADAM2Q99965 735 aa14.08□□□□□ -0.16
VPS9D1-201ENST00000389386 SOSTQ9BQB4 213 aa14.08□□□□□ -0.16
VPS9D1-201ENST00000389386 LRTM1Q9HBL6 345 aa14.08□□□□□ -0.16
VPS9D1-201ENST00000389386 POLMQ9NP87 494 aaPredicted RBP14.08□□□□□ -0.16
VPS9D1-201ENST00000389386 SSR3Q9UNL2 185 aa14.08□□□□□ -0.16
VPS9D1-201ENST00000389386 POFUT2Q9Y2G5 429 aa14.08□□□□□ -0.16
VPS9D1-201ENST00000389386 FKBP7Q9Y680 259 aa14.08□□□□□ -0.16
VPS9D1-201ENST00000389386 LOC102723532A0A0G2JNH3 316 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 TNFRSF11BO00300 401 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 SLC28A1O00337 649 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 FFAR3O14843 346 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 GPR42O15529 346 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 CHP2O43745 196 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 ZNF254O75437 659 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 PAGE1O75459 146 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 AP2A2O94973 939 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 IL2P60568 153 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 KCNJ10P78508 379 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 PPIGQ13427 754 aaKnown RBP eCLIP14.07□□□□□ -0.162e-6■■□□□ 13.3
VPS9D1-201ENST00000389386 EXOSC2Q13868 293 aaKnown RBP14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 FCN2Q15485 313 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 UPP1Q16831 310 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 PTPRNQ16849 979 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 DGLUCYQ7Z3D6 616 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 TMEM145Q8NBT3 493 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 OR10G2Q8NGC3 310 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 OR11H4Q8NGC9 324 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 RIT1Q92963 219 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 TADA1Q96BN2 335 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 CDKN2AIPNLQ96HQ2 116 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 ZSWIM3Q96MP5 696 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 FAM129BQ96TA1 746 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 NIPSNAP1Q9BPW8 284 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 DPCDQ9BVM2 203 aaPredicted RBP14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 CRISPLD1Q9H336 500 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 NDUFB11Q9NX14 153 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 GPRC5BQ9NZH0 403 aa14.07□□□□□ -0.16
VPS9D1-201ENST00000389386 MPP6Q9NZW5 540 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms