RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 F8W8V4 182 aa-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 H0YAE9 185 aa-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 I3L1I5 382 aaPredicted RBP-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 SAP30O75446 220 aa-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 NDST3O95803 873 aa-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 FCER2P06734 321 aa-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 RPL35AP18077 110 aaKnown RBP-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 PSMB1P20618 241 aaKnown RBP-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 ACVR1BP36896 505 aa-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 BRCC3P46736 316 aa-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 BLKP51451 505 aa-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 CAV2P51636 162 aa-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 ALDH18A1P54886 795 aaKnown RBP-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 CD81P60033 236 aa-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 RPS29P62273 56 aaKnown RBP-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 SLC39A6Q13433 755 aa-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 NAE1Q13564 534 aa-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 PDE7AQ13946 482 aa-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 SLC18A3Q16572 532 aa-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 TMEM266Q2M3C6 531 aa-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 ZNF528Q3MIS6 628 aa-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 PDLIM3Q53GG5 364 aaPredicted RBP-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 PCOTHQ58A44 107 aa-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 SH2D4BQ5SQS7 431 aa-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 CTRB2Q6GPI1 263 aa-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 CACNA2D4Q7Z3S7 1137 aa-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 RABEPKQ7Z6M1 372 aa-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 PXKQ7Z7A4 578 aa-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 LAX1Q8IWV1 398 aa-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 PM20D2Q8IYS1 436 aa-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 NRSN1Q8IZ57 195 aa-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 C6orf223Q8N319 242 aa-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 BLNKQ8WV28 456 aa-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 FRZBQ92765 325 aa-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 ZBED6CLQ96FA7 236 aaPredicted RBP-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 TAAR9Q96RI9 348 aa-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 IFIH1Q9BYX4 1025 aaKnown RBP-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 AGPAT4-IT1Q9H0P7 198 aa-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 THAP2Q9H0W7 228 aa-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 MOB1AQ9H8S9 216 aa-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 OPTCQ9UBM4 332 aa-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 TP73-AS1Q9UF72 201 aa-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 HOOK1Q9UJC3 728 aaKnown RBP-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 CDC23Q9UJX2 597 aa-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 PCDHGB4Q9UN71 923 aa-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 LRCH1Q9Y2L9 728 aa-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 PCDHGB3Q9Y5G1 929 aa-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 TNRC6AQ8NDV7 1962 aaKnown RBP-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 PCDH15Q96QU1 1955 aa-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 ARFGEF3Q5TH69 2177 aa-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 KDM6BO15054 1643 aa-1.18□□□□□ -2.6
RNU6-540P-201ENST00000384622 CNTNAP1P78357 1384 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 CARMIL3Q8ND23 1372 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 YLPM1P49750 1951 aaKnown RBP-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 GTF3C1Q12789 2109 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 IGHV3-20A0A0C4DH32 117 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 LCE6AA0A183 80 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 ZNF487B1APH4 448 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 LOC730098B7Z3J9 87 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 NBR2O15453 112 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 SMPD2O60906 423 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 BAIAP3O94812 1187 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 PDGFBP01127 241 aaPredicted RBP-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 HPNP05981 417 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 ZNF806P0C7X5 589 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 IGHV4-31P0DP07 118 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 MBL2P11226 248 aaPredicted RBP-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 ACP5P13686 325 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 PGAM2P15259 253 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 UGT1A6P19224 532 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 ABCD3P28288 659 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 PKLRP30613 574 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 SHMT1P34896 483 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 BMI1P35226 326 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 SLC1A4P43007 532 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 PSMC4P43686 418 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 RPL21P46778 160 aaKnown RBP-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 SLC6A8P48029 635 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 ITKQ08881 620 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 PTP4A2Q12974 167 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 PRKAA1Q13131 559 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 SNTB2Q13425 540 aaKnown RBP-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 CRMP1Q14194 572 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 GGTLC2Q14390 218 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 STK11Q15831 433 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 UPP1Q16831 310 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 LGALS9BQ3B8N2 356 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 SP6Q3SY56 376 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 LRRC24Q50LG9 513 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 SOWAHCQ53LP3 525 aaPredicted RBP-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 FAM83BQ5T0W9 1011 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 IFIT1BQ5T764 474 aaKnown RBP-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 LGALS9CQ6DKI2 356 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 MORN3Q6PF18 240 aaPredicted RBP-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 OLIG3Q7RTU3 272 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 AACSQ86V21 672 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 ZDHHC21Q8IVQ6 265 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 ARHGAP12Q8IWW6 846 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 LRRC43Q8N309 656 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 PTGR2Q8N8N7 351 aaPredicted RBP-1.19□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms