RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 FAM76AQ8TAV0 307 aa4.73□□□□□ -1.65
RNU6-40P-201ENST00000384254 TMEM190Q8WZ59 177 aa4.73□□□□□ -1.65
RNU6-40P-201ENST00000384254 AZIN2Q96A70 460 aa4.73□□□□□ -1.65
RNU6-40P-201ENST00000384254 ZNF501Q96CX3 271 aaPredicted RBP4.73□□□□□ -1.65
RNU6-40P-201ENST00000384254 ZNF486Q96H40 463 aaPredicted RBP4.73□□□□□ -1.65
RNU6-40P-201ENST00000384254 CDHR1Q96JP9 859 aa4.73□□□□□ -1.65
RNU6-40P-201ENST00000384254 LURAP1Q96LR2 239 aa4.73□□□□□ -1.65
RNU6-40P-201ENST00000384254 C2orf48Q96LS8 159 aa4.73□□□□□ -1.65
RNU6-40P-201ENST00000384254 PIGQQ9BRB3 760 aa4.73□□□□□ -1.65
RNU6-40P-201ENST00000384254 ZDHHC6Q9H6R6 413 aa4.73□□□□□ -1.65
RNU6-40P-201ENST00000384254 MTHFD2LQ9H903 347 aaPredicted RBP4.73□□□□□ -1.65
RNU6-40P-201ENST00000384254 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.73□□□□□ -1.65
RNU6-40P-201ENST00000384254 ATAD3AQ9NVI7 634 aa4.73□□□□□ -1.65
RNU6-40P-201ENST00000384254 FETUBQ9UGM5 382 aa4.73□□□□□ -1.65
RNU6-40P-201ENST00000384254 UBQLN2Q9UHD9 624 aa4.73□□□□□ -1.65
RNU6-40P-201ENST00000384254 LNPEPQ9UIQ6 1025 aa4.73□□□□□ -1.65
RNU6-40P-201ENST00000384254 HOOK1Q9UJC3 728 aaKnown RBP4.73□□□□□ -1.65
RNU6-40P-201ENST00000384254 TSPAN16Q9UKR8 245 aa4.73□□□□□ -1.65
RNU6-40P-201ENST00000384254 MRPS28Q9Y2Q9 187 aaKnown RBP4.73□□□□□ -1.65
RNU6-40P-201ENST00000384254 STRAPQ9Y3F4 350 aaKnown RBP4.73□□□□□ -1.65
RNU6-40P-201ENST00000384254 hCG_38984A0A1B0GV85 526 aa4.72□□□□□ -1.65
RNU6-40P-201ENST00000384254 C15orf61A6NNL5 157 aa4.72□□□□□ -1.65
RNU6-40P-201ENST00000384254 SLC28A1O00337 649 aa4.72□□□□□ -1.65
RNU6-40P-201ENST00000384254 MAGEB2O15479 319 aa4.72□□□□□ -1.65
RNU6-40P-201ENST00000384254 SEC22BO75396 215 aa4.72□□□□□ -1.65
RNU6-40P-201ENST00000384254 CHRNGP07510 517 aa4.72□□□□□ -1.65
RNU6-40P-201ENST00000384254 SFTPBP07988 381 aa4.72□□□□□ -1.65
RNU6-40P-201ENST00000384254 MMP10P09238 476 aa4.72□□□□□ -1.65
RNU6-40P-201ENST00000384254 SKILP12757 684 aa4.72□□□□□ -1.65
RNU6-40P-201ENST00000384254 HOXB6P17509 224 aaKnown RBP4.72□□□□□ -1.65
RNU6-40P-201ENST00000384254 ITGB6P18564 788 aa4.72□□□□□ -1.65
RNU6-40P-201ENST00000384254 ACKR3P25106 362 aa4.72□□□□□ -1.65
RNU6-40P-201ENST00000384254 NSFP46459 744 aaKnown RBP4.72□□□□□ -1.65
RNU6-40P-201ENST00000384254 CASP9P55211 416 aa4.72□□□□□ -1.65
RNU6-40P-201ENST00000384254 GIT2Q14161 759 aa4.72□□□□□ -1.65
RNU6-40P-201ENST00000384254 SMC1AQ14683 1233 aaKnown RBP4.72□□□□□ -1.65
RNU6-40P-201ENST00000384254 HLA-BQ31612 363 aa4.72□□□□□ -1.65
RNU6-40P-201ENST00000384254 TMEM64Q6YI46 380 aa4.72□□□□□ -1.65
RNU6-40P-201ENST00000384254 MEX3BQ6ZN04 569 aaKnown RBP4.72□□□□□ -1.65
RNU6-40P-201ENST00000384254 CUZD1Q86UP6 607 aa4.72□□□□□ -1.65
RNU6-40P-201ENST00000384254 ZNF619Q8N2I2 560 aa4.72□□□□□ -1.65
RNU6-40P-201ENST00000384254 SLC43A2Q8N370 569 aa4.72□□□□□ -1.65
RNU6-40P-201ENST00000384254 FBXW8Q8N3Y1 598 aa4.72□□□□□ -1.65
RNU6-40P-201ENST00000384254 SIDT2Q8NBJ9 832 aaKnown RBP4.72□□□□□ -1.65
RNU6-40P-201ENST00000384254 TRPV3Q8NET8 790 aa4.72□□□□□ -1.65
RNU6-40P-201ENST00000384254 EXOC6Q8TAG9 804 aa4.72□□□□□ -1.65
RNU6-40P-201ENST00000384254 URGCPQ8TCY9 931 aa4.72□□□□□ -1.65
RNU6-40P-201ENST00000384254 SAP25Q8TEE9 199 aa4.72□□□□□ -1.65
RNU6-40P-201ENST00000384254 PGLYRP2Q96PD5 576 aa4.72□□□□□ -1.65
RNU6-40P-201ENST00000384254 TMEM237Q96Q45 408 aa4.72□□□□□ -1.65
RNU6-40P-201ENST00000384254 CCM2Q9BSQ5 444 aa4.72□□□□□ -1.65
RNU6-40P-201ENST00000384254 HOXD1Q9GZZ0 328 aa4.72□□□□□ -1.65
RNU6-40P-201ENST00000384254 TMEM245Q9H330 911 aa4.72□□□□□ -1.65
RNU6-40P-201ENST00000384254 S100A14Q9HCY8 104 aa4.72□□□□□ -1.65
RNU6-40P-201ENST00000384254 UBE2TQ9NPD8 197 aaPredicted RBP4.72□□□□□ -1.65
RNU6-40P-201ENST00000384254 PLEK2Q9NYT0 353 aa4.72□□□□□ -1.65
RNU6-40P-201ENST00000384254 ZNF319Q9P2F9 582 aa4.72□□□□□ -1.65
RNU6-40P-201ENST00000384254 SH3GLB1Q9Y371 365 aa4.72□□□□□ -1.65
RNU6-40P-201ENST00000384254 TEX264Q9Y6I9 313 aa4.72□□□□□ -1.65
RNU6-40P-201ENST00000384254 A0A1W2PR80 420 aa4.71□□□□□ -1.66
RNU6-40P-201ENST00000384254 KRT87PA6NCN2 255 aa4.71□□□□□ -1.66
RNU6-40P-201ENST00000384254 ERVV-2B6SEH9 535 aa4.71□□□□□ -1.66
RNU6-40P-201ENST00000384254 RTCAO00442 366 aaKnown RBP4.71□□□□□ -1.66
RNU6-40P-201ENST00000384254 MLNRO43193 412 aa4.71□□□□□ -1.66
RNU6-40P-201ENST00000384254 IGHEP01854 428 aa4.71□□□□□ -1.66
RNU6-40P-201ENST00000384254 SP1P08047 785 aa4.71□□□□□ -1.66
RNU6-40P-201ENST00000384254 NUDT17P0C025 328 aa4.71□□□□□ -1.66
RNU6-40P-201ENST00000384254 GAP43P17677 238 aa4.71□□□□□ -1.66
RNU6-40P-201ENST00000384254 C4BPBP20851 252 aa4.71□□□□□ -1.66
RNU6-40P-201ENST00000384254 MARCKSP29966 332 aaPredicted RBP4.71□□□□□ -1.66
RNU6-40P-201ENST00000384254 TNFSF10P50591 281 aa4.71□□□□□ -1.66
RNU6-40P-201ENST00000384254 LUMP51884 338 aaPredicted RBP4.71□□□□□ -1.66
RNU6-40P-201ENST00000384254 IRX4P78413 519 aa4.71□□□□□ -1.66
RNU6-40P-201ENST00000384254 GPR50Q13585 617 aa4.71□□□□□ -1.66
RNU6-40P-201ENST00000384254 TRA2AQ13595 282 aaKnown RBP eCLIP4.71□□□□□ -1.66
RNU6-40P-201ENST00000384254 SPHARQ15513 63 aa4.71□□□□□ -1.66
RNU6-40P-201ENST00000384254 STX1AQ16623 288 aa4.71□□□□□ -1.66
RNU6-40P-201ENST00000384254 CYP4V2Q6ZWL3 525 aaPredicted RBP4.71□□□□□ -1.66
RNU6-40P-201ENST00000384254 STHQ8IWL8 128 aa4.71□□□□□ -1.66
RNU6-40P-201ENST00000384254 ZNF248Q8NDW4 579 aa4.71□□□□□ -1.66
RNU6-40P-201ENST00000384254 OR4A16Q8NH70 328 aa4.71□□□□□ -1.66
RNU6-40P-201ENST00000384254 RPLP0P6Q8NHW5 317 aa4.71□□□□□ -1.66
RNU6-40P-201ENST00000384254 SLC13A3Q8WWT9 602 aa4.71□□□□□ -1.66
RNU6-40P-201ENST00000384254 SLC35C1Q96A29 364 aa4.71□□□□□ -1.66
RNU6-40P-201ENST00000384254 RUNDC3BQ96NL0 473 aa4.71□□□□□ -1.66
RNU6-40P-201ENST00000384254 KLHL8Q9P2G9 620 aaPredicted RBP4.71□□□□□ -1.66
RNU6-40P-201ENST00000384254 PSORS1C1Q9UIG5 152 aa4.71□□□□□ -1.66
RNU6-40P-201ENST00000384254 ANGPTL3Q9Y5C1 460 aa4.71□□□□□ -1.66
RNU6-40P-201ENST00000384254 CSNK1G3Q9Y6M4 447 aa4.71□□□□□ -1.66
RNU6-40P-201ENST00000384254 DISP3Q9P2K9 1392 aa4.7□□□□□ -1.66
RNU6-40P-201ENST00000384254 MEIOCA2RUB1 952 aa4.7□□□□□ -1.66
RNU6-40P-201ENST00000384254 GTPBP10A4D1E9 387 aaKnown RBP4.7□□□□□ -1.66
RNU6-40P-201ENST00000384254 ARHGAP42A6NI28 874 aa4.7□□□□□ -1.66
RNU6-40P-201ENST00000384254 OGTO15294 1046 aa4.7□□□□□ -1.66
RNU6-40P-201ENST00000384254 AMBPP02760 352 aa4.7□□□□□ -1.66
RNU6-40P-201ENST00000384254 ALPPP05187 535 aa4.7□□□□□ -1.66
RNU6-40P-201ENST00000384254 RPLP0P05388 317 aaKnown RBP4.7□□□□□ -1.66
RNU6-40P-201ENST00000384254 ALPPL2P10696 532 aa4.7□□□□□ -1.66
RNU6-40P-201ENST00000384254 ODC1P11926 461 aa4.7□□□□□ -1.66
RNU6-40P-201ENST00000384254 IL10P22301 178 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms