RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 ZNF878C9JN71 531 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 BOLA2-SMG1P6H3BVE0 249 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 TYROBPO43914 113 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 LBX1P52954 281 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 RABGGTBP53611 331 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 DNAJB13P59910 316 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 MAPK14Q16539 360 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 EOGTQ5NDL2 527 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 FOXRED2Q8IWF2 684 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 GRHL3Q8TE85 626 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 IRF7Q92985 503 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 RGMAQ96B86 450 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 PYCR2Q96C36 320 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 LRCH3Q96II8 777 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 TM9SF2Q99805 663 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 TMEM246Q9BRR3 403 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 ASPNQ9BXN1 380 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 C2orf92A0A1B0GVN3 265 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 NUAK1O60285 661 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 ZNF30P17039 623 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 MAPK3P27361 379 aaPredicted RBP13.51□□□□□ -0.25
SNPH-201ENST00000381867 AMZ1Q400G9 498 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 CDKL4Q5MAI5 379 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 ELMOD2Q8IZ81 293 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 SLC44A3Q8N4M1 653 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 ANKFN1Q8N957 763 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 COQ8AQ8NI60 647 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 YIPF4Q9BSR8 244 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 DERL2Q9GZP9 239 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 TPT1P8Q9HAU6 139 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 NEUROD4Q9HD90 331 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 PAK1IP1Q9NWT1 392 aaPredicted RBP13.51□□□□□ -0.25
SNPH-201ENST00000381867 SLX4Q8IY92 1834 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 LOC100509620A0A075B734 347 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 RPP14O95059 124 aaKnown RBP13.51□□□□□ -0.25
SNPH-201ENST00000381867 F7P08709 466 aaPredicted RBP13.51□□□□□ -0.25
SNPH-201ENST00000381867 MAGEA8P43361 318 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 E2F1Q01094 437 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 SLC25A11Q02978 314 aaKnown RBP13.51□□□□□ -0.25
SNPH-201ENST00000381867 PIM3Q86V86 326 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 AUTS2Q8WXX7 1259 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 SLC45A3Q96JT2 553 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 SMURF1Q9HCE7 757 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 DNAJC27Q9NZQ0 273 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 MGAT4BQ9UQ53 548 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 MARF1Q9Y4F3 1742 aaKnown RBP13.51□□□□□ -0.25
SNPH-201ENST00000381867 DFNA5O60443 496 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 OAZ2O95190 189 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 TGFB1P01137 390 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 ANXA3P12429 323 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 PM20D2Q8IYS1 436 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 SCML4Q8N228 414 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 GLIS1Q8NBF1 620 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 TSPEARQ8WU66 669 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 CDCA3Q99618 268 aaPredicted RBP13.51□□□□□ -0.25
SNPH-201ENST00000381867 CCSER2Q9H7U1 834 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 SLC39A1Q9NY26 324 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 ABCD2Q9UBJ2 740 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 C14orf166Q9Y224 244 aaKnown RBP13.51□□□□□ -0.25
SNPH-201ENST00000381867 HS3ST4Q9Y661 456 aa13.51□□□□□ -0.25
SNPH-201ENST00000381867 CBSLP0DN79 551 aa13.5□□□□□ -0.25
SNPH-201ENST00000381867 FGF3P11487 239 aaPredicted RBP13.5□□□□□ -0.25
SNPH-201ENST00000381867 CBSP35520 551 aa13.5□□□□□ -0.25
SNPH-201ENST00000381867 GRIA2P42262 883 aa13.5□□□□□ -0.25
SNPH-201ENST00000381867 LSAMPQ13449 338 aa13.5□□□□□ -0.25
SNPH-201ENST00000381867 CYBRD1Q53TN4 286 aa13.5□□□□□ -0.25
SNPH-201ENST00000381867 MEDAGQ5VYS4 303 aa13.5□□□□□ -0.25
SNPH-201ENST00000381867 ZNF101Q8IZC7 436 aa13.5□□□□□ -0.25
SNPH-201ENST00000381867 LMO3Q8TAP4 145 aa13.5□□□□□ -0.25
SNPH-201ENST00000381867 PMEPA1Q969W9 287 aa13.5□□□□□ -0.25
SNPH-201ENST00000381867 FIZ1Q96SL8 496 aa13.5□□□□□ -0.25
SNPH-201ENST00000381867 SUV39H2Q9H5I1 410 aa13.5□□□□□ -0.25
SNPH-201ENST00000381867 HCN3Q9P1Z3 774 aa13.5□□□□□ -0.25
SNPH-201ENST00000381867 SCP2D1Q9UJQ7 156 aa13.5□□□□□ -0.25
SNPH-201ENST00000381867 GMEB2Q9UKD1 530 aa13.5□□□□□ -0.25
SNPH-201ENST00000381867 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.5□□□□□ -0.25
SNPH-201ENST00000381867 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.5□□□□□ -0.25
SNPH-201ENST00000381867 MT-ND5P03915 603 aa13.5□□□□□ -0.25
SNPH-201ENST00000381867 MATN1P21941 496 aa13.5□□□□□ -0.25
SNPH-201ENST00000381867 PDX1P52945 283 aa13.5□□□□□ -0.25
SNPH-201ENST00000381867 GALNT2Q10471 571 aa13.5□□□□□ -0.25
SNPH-201ENST00000381867 MAD2L1BPQ15013 274 aaPredicted RBP13.5□□□□□ -0.25
SNPH-201ENST00000381867 PIGGQ5H8A4 983 aa13.5□□□□□ -0.25
SNPH-201ENST00000381867 SPANXN4Q5MJ08 99 aa13.5□□□□□ -0.25
SNPH-201ENST00000381867 TREML1Q86YW5 311 aa13.5□□□□□ -0.25
SNPH-201ENST00000381867 CEP97Q8IW35 865 aa13.5□□□□□ -0.25
SNPH-201ENST00000381867 RASGEF1AQ8N9B8 481 aa13.5□□□□□ -0.25
SNPH-201ENST00000381867 MAFIPQ8WZ33 124 aa13.5□□□□□ -0.25
SNPH-201ENST00000381867 NECTIN4Q96NY8 510 aa13.5□□□□□ -0.25
SNPH-201ENST00000381867 SLC2A13Q96QE2 648 aa13.5□□□□□ -0.25
SNPH-201ENST00000381867 MS4A12Q9NXJ0 267 aa13.5□□□□□ -0.25
SNPH-201ENST00000381867 SMCO3A2RU48 225 aa13.5□□□□□ -0.25
SNPH-201ENST00000381867 CDC7O00311 574 aa13.5□□□□□ -0.25
SNPH-201ENST00000381867 SOX14O95416 240 aa13.5□□□□□ -0.25
SNPH-201ENST00000381867 ATP5A1P25705 553 aaKnown RBP13.5□□□□□ -0.25
SNPH-201ENST00000381867 HOXC12P31275 282 aa13.5□□□□□ -0.25
SNPH-201ENST00000381867 MAP2K3P46734 347 aa13.5□□□□□ -0.25
SNPH-201ENST00000381867 PON3Q15166 354 aa13.5□□□□□ -0.25
SNPH-201ENST00000381867 GDPD4Q6W3E5 623 aa13.5□□□□□ -0.25
SNPH-201ENST00000381867 JAGN1Q8N5M9 183 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms