RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 LRRC3BQ96PB8 259 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 OR4K3Q96R72 315 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 CPNE5Q9HCH3 593 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 ADPRHL2Q9NX46 363 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 PCDHGA2Q9Y5H1 932 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 SAP18O00422 153 aaKnown RBP15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 NUAK1O60285 661 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 ANXA4P09525 319 aaPredicted RBP15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 HOXB6P17509 224 aaKnown RBP15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 CYP2A7P20853 494 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 TCEA1P23193 301 aaKnown RBP15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 PCYT1AP49585 367 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 CDC20Q12834 499 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 VEZF1Q14119 521 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 GANABQ14697 944 aaKnown RBP15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 STARD3Q14849 445 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 CPTPQ5TA50 214 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 TMEM220Q6QAJ8 160 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 MSANTD1Q6ZTZ1 278 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 USP43Q70EL4 1123 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 LGI4Q8N135 537 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 CYP4Z2PQ8N1L4 340 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 STX19Q8N4C7 294 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 OR4A15Q8NGL6 344 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 TMEM159Q96B96 161 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 FCRL1Q96LA6 429 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 SP140LQ9H930 580 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 CCDC88CQ9P219 2028 aa15.59■□□□□ 0.09
NKX3-1-201ENST00000380871 ARHGEF33A8MVX0 844 aa15.59■□□□□ 0.09
NKX3-1-201ENST00000380871 GFYI3L273 518 aa15.59■□□□□ 0.09
NKX3-1-201ENST00000380871 RPLP0P05388 317 aaKnown RBP15.59■□□□□ 0.09
NKX3-1-201ENST00000380871 ELFN1P0C7U0 828 aa15.59■□□□□ 0.09
NKX3-1-201ENST00000380871 THOC6Q86W42 341 aaKnown RBP15.59■□□□□ 0.09
NKX3-1-201ENST00000380871 ATL1Q8WXF7 558 aa15.59■□□□□ 0.09
NKX3-1-201ENST00000380871 KCNS3Q9BQ31 491 aa15.59■□□□□ 0.09
NKX3-1-201ENST00000380871 EHD1Q9H4M9 534 aa15.59■□□□□ 0.09
NKX3-1-201ENST00000380871 TRIM39Q9HCM9 518 aa15.59■□□□□ 0.09
NKX3-1-201ENST00000380871 MS4A12Q9NXJ0 267 aa15.59■□□□□ 0.09
NKX3-1-201ENST00000380871 EXO1Q9UQ84 846 aaKnown RBP15.59■□□□□ 0.09
NKX3-1-201ENST00000380871 USP34Q70CQ2 3546 aa15.59■□□□□ 0.09
NKX3-1-201ENST00000380871 GNG14A0A1W2PPG7 69 aa15.59■□□□□ 0.09
NKX3-1-201ENST00000380871 HNMTP50135 292 aa15.59■□□□□ 0.09
NKX3-1-201ENST00000380871 MC1RQ01726 317 aa15.59■□□□□ 0.09
NKX3-1-201ENST00000380871 GDPD3Q7L5L3 318 aa15.59■□□□□ 0.09
NKX3-1-201ENST00000380871 C12orf40Q86WS4 652 aa15.59■□□□□ 0.09
NKX3-1-201ENST00000380871 LACC1Q8IV20 430 aa15.59■□□□□ 0.09
NKX3-1-201ENST00000380871 NPAS3Q8IXF0 933 aa15.59■□□□□ 0.09
NKX3-1-201ENST00000380871 CIDECQ96AQ7 238 aaPredicted RBP15.59■□□□□ 0.09
NKX3-1-201ENST00000380871 LMLNQ96KR4 655 aa15.59■□□□□ 0.09
NKX3-1-201ENST00000380871 SGK2Q9HBY8 427 aa15.59■□□□□ 0.09
NKX3-1-201ENST00000380871 CFAP20Q9Y6A4 193 aaKnown RBP15.59■□□□□ 0.09
NKX3-1-201ENST00000380871 NINQ8N4C6 2090 aa15.59■□□□□ 0.09
NKX3-1-201ENST00000380871 PCDH17O14917 1159 aa15.58■□□□□ 0.09
NKX3-1-201ENST00000380871 UGT2B10P36537 528 aa15.58■□□□□ 0.09
NKX3-1-201ENST00000380871 RGS6P49758 472 aa15.58■□□□□ 0.09
NKX3-1-201ENST00000380871 TUBA1BP68363 451 aa15.58■□□□□ 0.09
NKX3-1-201ENST00000380871 HBA1P69905 142 aa15.58■□□□□ 0.09
NKX3-1-201ENST00000380871 COL9A2Q14055 689 aaPredicted RBP15.58■□□□□ 0.09
NKX3-1-201ENST00000380871 TUBA1AQ71U36 451 aa15.58■□□□□ 0.09
NKX3-1-201ENST00000380871 METTL3Q86U44 580 aaKnown RBP15.58■□□□□ 0.09
NKX3-1-201ENST00000380871 TRAPPC5Q8IUR0 188 aa15.58■□□□□ 0.09
NKX3-1-201ENST00000380871 B3GNT7Q8NFL0 401 aa15.58■□□□□ 0.09
NKX3-1-201ENST00000380871 CAPSLQ8WWF8 208 aa15.58■□□□□ 0.09
NKX3-1-201ENST00000380871 MYDGFQ969H8 173 aa15.58■□□□□ 0.09
NKX3-1-201ENST00000380871 C11orf24Q96F05 449 aaPredicted RBP15.58■□□□□ 0.09
NKX3-1-201ENST00000380871 TXNDC15Q96J42 360 aa15.58■□□□□ 0.09
NKX3-1-201ENST00000380871 SPATA6Q9NWH7 488 aaPredicted RBP15.58■□□□□ 0.09
NKX3-1-201ENST00000380871 ERVK13-1Q9NX77 482 aa15.58■□□□□ 0.09
NKX3-1-201ENST00000380871 PADI2Q9Y2J8 665 aa15.58■□□□□ 0.09
NKX3-1-201ENST00000380871 INSL6Q9Y581 213 aa15.58■□□□□ 0.09
NKX3-1-201ENST00000380871 CTDSP2O14595 271 aa15.58■□□□□ 0.08
NKX3-1-201ENST00000380871 CYP2A6P11509 494 aaPredicted RBP15.58■□□□□ 0.08
NKX3-1-201ENST00000380871 VIPR1P32241 457 aa15.58■□□□□ 0.08
NKX3-1-201ENST00000380871 BMPR1AP36894 532 aa15.58■□□□□ 0.08
NKX3-1-201ENST00000380871 MVDP53602 400 aa15.58■□□□□ 0.08
NKX3-1-201ENST00000380871 SELENOWP63302 87 aa15.58■□□□□ 0.08
NKX3-1-201ENST00000380871 MEF2AQ02078 507 aaPredicted RBP15.58■□□□□ 0.08
NKX3-1-201ENST00000380871 ZNF181Q2M3W8 571 aa15.58■□□□□ 0.08
NKX3-1-201ENST00000380871 IER5LQ5T953 404 aa15.58■□□□□ 0.08
NKX3-1-201ENST00000380871 CCBE1Q6UXH8 406 aaPredicted RBP15.58■□□□□ 0.08
NKX3-1-201ENST00000380871 AMER2Q8N7J2 671 aa15.58■□□□□ 0.08
NKX3-1-201ENST00000380871 NFKBIDQ8NI38 313 aa15.58■□□□□ 0.08
NKX3-1-201ENST00000380871 ASZ1Q8WWH4 475 aa15.58■□□□□ 0.08
NKX3-1-201ENST00000380871 FCGR1BQ92637 280 aa15.58■□□□□ 0.08
NKX3-1-201ENST00000380871 POP5Q969H6 163 aaKnown RBP15.58■□□□□ 0.08
NKX3-1-201ENST00000380871 MCCC1Q96RQ3 725 aaPredicted RBP15.58■□□□□ 0.08
NKX3-1-201ENST00000380871 FKBP14Q9NWM8 211 aa15.58■□□□□ 0.08
NKX3-1-201ENST00000380871 IFT52Q9Y366 437 aa15.58■□□□□ 0.08
NKX3-1-201ENST00000380871 CEP290O15078 2479 aa15.58■□□□□ 0.08
NKX3-1-201ENST00000380871 IGLV3-16A0A075B6K0 115 aa15.58■□□□□ 0.08
NKX3-1-201ENST00000380871 GRXCR1A8MXD5 290 aa15.58■□□□□ 0.08
NKX3-1-201ENST00000380871 IDSP22304 550 aa15.58■□□□□ 0.08
NKX3-1-201ENST00000380871 SLC6A11P48066 632 aa15.58■□□□□ 0.08
NKX3-1-201ENST00000380871 ST8SIA6P61647 398 aa15.58■□□□□ 0.08
NKX3-1-201ENST00000380871 IFITM2Q01629 132 aa15.58■□□□□ 0.08
NKX3-1-201ENST00000380871 MED22Q15528 200 aa15.58■□□□□ 0.08
NKX3-1-201ENST00000380871 CCDC92Q53HC0 331 aaPredicted RBP15.58■□□□□ 0.08
NKX3-1-201ENST00000380871 DEPDC1Q5TB30 811 aa15.58■□□□□ 0.08
NKX3-1-201ENST00000380871 ZNF605Q86T29 641 aa15.58■□□□□ 0.08
NKX3-1-201ENST00000380871 CFAP206Q8IYR0 622 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms