RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 RNGTTO60942 597 aaKnown RBP10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 SH3BGRLO75368 114 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 SEC24DO94855 1032 aaPredicted RBP10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 OR6B1O95007 311 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 KLK1P06870 262 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 ITGAMP11215 1152 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 NELFEP18615 380 aaKnown RBP10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 CDH2P19022 906 aaPredicted RBP10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 FPR1P21462 350 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 PKLRP30613 574 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 DNAJA1P31689 397 aaKnown RBP10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 HLCSP50747 726 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 RAB28P51157 221 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 TPD52P55327 224 aaPredicted RBP10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 ITGA1P56199 1179 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 TAS2R50P59544 299 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 TRA2BP62995 288 aaKnown RBP10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 MEF2AQ02078 507 aaPredicted RBP10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 DYNC1I2Q13409 638 aaKnown RBP10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 GAB1Q13480 694 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 FGL2Q14314 439 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 GCNT6Q5T4J0 391 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 ISLR2Q6UXK2 745 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 USP30Q70CQ3 517 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 GPR141Q7Z602 305 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 HORMAD1Q86X24 394 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 NUDT13Q86X67 352 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 OR2L8Q8NGY9 312 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 HDAC2Q92769 488 aaKnown RBP10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 HSH2DQ96JZ2 352 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 C12orf66Q96MD2 445 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 CAMK1GQ96NX5 476 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 FERD3LQ96RJ6 166 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 SLC35A5Q9BS91 424 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 ING2Q9H160 280 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 TOR3AQ9H497 397 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 MIEF1Q9NQG6 463 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 FAM118AQ9NWS6 357 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 SPASTQ9UBP0 616 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 UTS2RQ9UKP6 389 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 BLOC1S6Q9UL45 172 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 ERVK-11Q9UQG0 969 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 HEBP2Q9Y5Z4 205 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 ACACBO00763 2458 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 DNAH14Q0VDD8 3507 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 A0A1B0GTW7 788 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 A0A1W2PPV9 198 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 A0A1W2PRB8 838 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 EME2A4GXA9 379 aaPredicted RBP10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 ANTXRLA6NF34 631 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 SLC16A6O15403 523 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 SUV39H1O43463 412 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 HS6ST1O60243 411 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 UGT2B11O75310 529 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 CLEC3AO75596 197 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 C6orf47O95873 294 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 PAK4O96013 591 aaPredicted RBP10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 IFNA14P01570 189 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 ASGR2P07307 311 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 IL3P08700 152 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 ACP5P13686 325 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 DDCP20711 480 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 UQCRC2P22695 453 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 TPP2P29144 1249 aaPredicted RBP10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 CDK9P50750 372 aaKnown RBP10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 ARFIP1P53367 373 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 NUBP1P53384 320 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 SEC13P55735 322 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 KIAA1024LP59773 190 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 GABARAPL2P60520 117 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 HBA1P69905 142 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 ABATP80404 500 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 LSAMPQ13449 338 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 SPIDRQ14159 915 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 HEPACAMQ14CZ8 416 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 ZNF630Q2M218 657 aaPredicted RBP10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 ZBED5Q49AG3 693 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 CCDC80Q76M96 950 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 CHST15Q7LFX5 561 aaPredicted RBP10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 CACUL1Q86Y37 369 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 OFCC1Q8IZS5 231 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 TBC1D19Q8N5T2 526 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 ZNF740Q8NDX6 193 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 SETD9Q8NE22 299 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 DENND6BQ8NEG7 585 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 OR14C36Q8NHC7 312 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 RGMAQ96B86 450 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 SCARF2Q96GP6 870 aaPredicted RBP10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 NECTIN4Q96NY8 510 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 MUS81Q96NY9 551 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 MBOAT4Q96T53 435 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 INSM2Q96T92 566 aaPredicted RBP10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 TUBA1CQ9BQE3 449 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 APOOQ9BUR5 198 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 BTBD1Q9H0C5 482 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 TM7SF3Q9NS93 570 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 RSL24D1Q9UHA3 163 aaKnown RBP10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 NCKAP1Q9Y2A7 1128 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 PADI2Q9Y2J8 665 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms