RNA–Protein interactions for RNA: ENST00000377595.7

UCHL3-201, Transcript of ubiquitin C-terminal hydrolase L3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UCHL3, Length 844 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCHL3-201ENST00000377595 CEP97Q8IW35 865 aa14.29□□□□□ -0.12
UCHL3-201ENST00000377595 GHDCQ8N2G8 530 aa14.29□□□□□ -0.12
UCHL3-201ENST00000377595 CPSF7Q8N684 471 aaKnown RBP14.29□□□□□ -0.12
UCHL3-201ENST00000377595 AICDAQ9GZX7 198 aa14.29□□□□□ -0.12
UCHL3-201ENST00000377595 GPAMQ9HCL2 828 aa14.29□□□□□ -0.12
UCHL3-201ENST00000377595 FBXW2Q9UKT8 454 aa14.29□□□□□ -0.12
UCHL3-201ENST00000377595 MEMO1Q9Y316 297 aa14.29□□□□□ -0.12
UCHL3-201ENST00000377595 SNX24Q9Y343 169 aa14.29□□□□□ -0.12
UCHL3-201ENST00000377595 ZGRF1Q86YA3 2104 aa14.29□□□□□ -0.12
UCHL3-201ENST00000377595 LRBAP50851 2863 aa14.28□□□□□ -0.12
UCHL3-201ENST00000377595 IGKV3D-11A0A0A0MRZ8 115 aa14.28□□□□□ -0.12
UCHL3-201ENST00000377595 EFCAB8A8MWE9 144 aa14.28□□□□□ -0.12
UCHL3-201ENST00000377595 C4orf51C9J302 202 aa14.28□□□□□ -0.12
UCHL3-201ENST00000377595 KLRC4-KLRK1H3BQV0 150 aa14.28□□□□□ -0.12
UCHL3-201ENST00000377595 CLDN4O14493 209 aa14.28□□□□□ -0.12
UCHL3-201ENST00000377595 NME2P1O60361 137 aa14.28□□□□□ -0.12
UCHL3-201ENST00000377595 PIAS1O75925 651 aa14.28□□□□□ -0.12
UCHL3-201ENST00000377595 MYO1DO94832 1006 aa14.28□□□□□ -0.12
UCHL3-201ENST00000377595 SEC31AO94979 1220 aaKnown RBP14.28□□□□□ -0.12
UCHL3-201ENST00000377595 NME2P22392 152 aa14.28□□□□□ -0.12
UCHL3-201ENST00000377595 TRHRP34981 398 aaPredicted RBP14.28□□□□□ -0.12
UCHL3-201ENST00000377595 CLCN2P51788 898 aa14.28□□□□□ -0.12
UCHL3-201ENST00000377595 HSF1Q00613 529 aa14.28□□□□□ -0.12
UCHL3-201ENST00000377595 SLBPQ14493 270 aaKnown RBP eCLIP14.28□□□□□ -0.12
UCHL3-201ENST00000377595 FASTKD3Q14CZ7 662 aaKnown RBP14.28□□□□□ -0.12
UCHL3-201ENST00000377595 RNFT1Q5M7Z0 435 aa14.28□□□□□ -0.12
UCHL3-201ENST00000377595 CAPN12Q6ZSI9 719 aa14.28□□□□□ -0.12
UCHL3-201ENST00000377595 ZNF227Q86WZ6 799 aa14.28□□□□□ -0.12
UCHL3-201ENST00000377595 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.28□□□□□ -0.12
UCHL3-201ENST00000377595 KLHDC8AQ8IYD2 350 aa14.28□□□□□ -0.12
UCHL3-201ENST00000377595 KRT78Q8N1N4 520 aa14.28□□□□□ -0.12
UCHL3-201ENST00000377595 SPATA6LQ8N4H0 392 aa14.28□□□□□ -0.12
UCHL3-201ENST00000377595 TMEM156Q8N614 296 aa14.28□□□□□ -0.12
UCHL3-201ENST00000377595 TTLQ8NG68 377 aa14.28□□□□□ -0.12
UCHL3-201ENST00000377595 RHBDF1Q96CC6 855 aa14.28□□□□□ -0.12
UCHL3-201ENST00000377595 DIDO1Q9BTC0 2240 aaKnown RBP14.28□□□□□ -0.12
UCHL3-201ENST00000377595 CAPS2Q9BXY5 557 aa14.28□□□□□ -0.12
UCHL3-201ENST00000377595 KCNF1Q9H3M0 494 aa14.28□□□□□ -0.12
UCHL3-201ENST00000377595 TRIM45Q9H8W5 580 aaPredicted RBP14.28□□□□□ -0.12
UCHL3-201ENST00000377595 PRTFDC1Q9NRG1 225 aa14.28□□□□□ -0.12
UCHL3-201ENST00000377595 NSMCE4AQ9NXX6 385 aa14.28□□□□□ -0.12
UCHL3-201ENST00000377595 MTO1Q9Y2Z2 717 aaKnown RBP14.28□□□□□ -0.12
UCHL3-201ENST00000377595 SAR1BQ9Y6B6 198 aa14.28□□□□□ -0.12
UCHL3-201ENST00000377595 TRBV11-1A0A0K0K1C0 115 aa14.27□□□□□ -0.13
UCHL3-201ENST00000377595 LRIT2A6NDA9 550 aa14.27□□□□□ -0.13
UCHL3-201ENST00000377595 ANKDD1BA6NHY2 528 aa14.27□□□□□ -0.13
UCHL3-201ENST00000377595 PRRG2O14669 202 aa14.27□□□□□ -0.13
UCHL3-201ENST00000377595 ERI3O43414 337 aaKnown RBP14.27□□□□□ -0.13
UCHL3-201ENST00000377595 ZNF24P17028 368 aa14.27□□□□□ -0.13
UCHL3-201ENST00000377595 AGAP20933 346 aa14.27□□□□□ -0.13
UCHL3-201ENST00000377595 ELAVL4P26378 380 aaKnown RBP14.27□□□□□ -0.13
UCHL3-201ENST00000377595 PLA2G16P53816 162 aa14.27□□□□□ -0.13
UCHL3-201ENST00000377595 SLC13A2Q13183 592 aa14.27□□□□□ -0.13
UCHL3-201ENST00000377595 C3P1Q6ZMU1 363 aa14.27□□□□□ -0.13
UCHL3-201ENST00000377595 ADAMTSL2Q86TH1 951 aa14.27□□□□□ -0.13
UCHL3-201ENST00000377595 DOLPP1Q86YN1 238 aa14.27□□□□□ -0.13
UCHL3-201ENST00000377595 SULF2Q8IWU5 870 aa14.27□□□□□ -0.13
UCHL3-201ENST00000377595 ZBED8Q8IZ13 594 aa14.27□□□□□ -0.13
UCHL3-201ENST00000377595 B3GNT7Q8NFL0 401 aa14.27□□□□□ -0.13
UCHL3-201ENST00000377595 AGAP11Q8TF27 550 aa14.27□□□□□ -0.13
UCHL3-201ENST00000377595 GAL3ST3Q96A11 431 aa14.27□□□□□ -0.13
UCHL3-201ENST00000377595 MTFMTQ96DP5 389 aaKnown RBP14.27□□□□□ -0.13
UCHL3-201ENST00000377595 MS4A6EQ96DS6 147 aa14.27□□□□□ -0.13
UCHL3-201ENST00000377595 PDLIM2Q96JY6 352 aa14.27□□□□□ -0.13
UCHL3-201ENST00000377595 NPLQ9BXD5 320 aaPredicted RBP14.27□□□□□ -0.13
UCHL3-201ENST00000377595 RHOJQ9H4E5 214 aa14.27□□□□□ -0.13
UCHL3-201ENST00000377595 KLF13Q9Y2Y9 288 aaPredicted RBP14.27□□□□□ -0.13
UCHL3-201ENST00000377595 MMACHCQ9Y4U1 282 aa14.27□□□□□ -0.13
UCHL3-201ENST00000377595 A0A088AWK7 358 aa14.26□□□□□ -0.13
UCHL3-201ENST00000377595 USP27XA6NNY8 438 aa14.26□□□□□ -0.13
UCHL3-201ENST00000377595 CCDC188H7C350 402 aa14.26□□□□□ -0.13
UCHL3-201ENST00000377595 CLGNO14967 610 aa14.26□□□□□ -0.13
UCHL3-201ENST00000377595 TP73O15350 636 aa14.26□□□□□ -0.13
UCHL3-201ENST00000377595 B3GALT2O43825 422 aa14.26□□□□□ -0.13
UCHL3-201ENST00000377595 PEX1O43933 1283 aa14.26□□□□□ -0.13
UCHL3-201ENST00000377595 CLDN14O95500 239 aa14.26□□□□□ -0.13
UCHL3-201ENST00000377595 CCDC166P0CW27 439 aa14.26□□□□□ -0.13
UCHL3-201ENST00000377595 ZNF10P21506 573 aaPredicted RBP14.26□□□□□ -0.13
UCHL3-201ENST00000377595 HNRNPH1P31943 449 aaKnown RBP14.26□□□□□ -0.13
UCHL3-201ENST00000377595 PTGER4P35408 488 aa14.26□□□□□ -0.13
UCHL3-201ENST00000377595 RFC3P40938 356 aa14.26□□□□□ -0.13
UCHL3-201ENST00000377595 RPL21P46778 160 aaKnown RBP14.26□□□□□ -0.13
UCHL3-201ENST00000377595 SLC6A12P48065 614 aa14.26□□□□□ -0.13
UCHL3-201ENST00000377595 MEOX1P50221 254 aa14.26□□□□□ -0.13
UCHL3-201ENST00000377595 HSD17B7P56937 341 aa14.26□□□□□ -0.13
UCHL3-201ENST00000377595 MRPS25P82663 173 aaKnown RBP14.26□□□□□ -0.13
UCHL3-201ENST00000377595 POU4F1Q01851 419 aa14.26□□□□□ -0.13
UCHL3-201ENST00000377595 TGFBIQ15582 683 aa14.26□□□□□ -0.13
UCHL3-201ENST00000377595 NCCRP1Q6ZVX7 275 aaPredicted RBP14.26□□□□□ -0.13
UCHL3-201ENST00000377595 GPSM1Q86YR5 675 aa14.26□□□□□ -0.13
UCHL3-201ENST00000377595 SNX31Q8N9S9 440 aa14.26□□□□□ -0.13
UCHL3-201ENST00000377595 APCDD1LQ8NCL9 501 aa14.26□□□□□ -0.13
UCHL3-201ENST00000377595 PYROXD1Q8WU10 500 aa14.26□□□□□ -0.13
UCHL3-201ENST00000377595 ESAMQ96AP7 390 aa14.26□□□□□ -0.13
UCHL3-201ENST00000377595 KRT12Q99456 494 aa14.26□□□□□ -0.13
UCHL3-201ENST00000377595 NAPGQ99747 312 aaPredicted RBP14.26□□□□□ -0.13
UCHL3-201ENST00000377595 CCDC77Q9BR77 488 aa14.26□□□□□ -0.13
UCHL3-201ENST00000377595 NT5DC2Q9H857 520 aa14.26□□□□□ -0.13
UCHL3-201ENST00000377595 CAB39LQ9H9S4 337 aa14.26□□□□□ -0.13
UCHL3-201ENST00000377595 POPDC3Q9HBV1 291 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms