RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 SERPINB1P30740 379 aa15.82■□□□□ 0.12
HMGN4-201ENST00000377575 HNRNPH1P31943 449 aaKnown RBP15.82■□□□□ 0.12
HMGN4-201ENST00000377575 OR4D2P58180 307 aa15.82■□□□□ 0.12
HMGN4-201ENST00000377575 BTN3A2P78410 334 aa15.82■□□□□ 0.12
HMGN4-201ENST00000377575 UBAP2LQ14157 1087 aaKnown RBP15.82■□□□□ 0.12
HMGN4-201ENST00000377575 ADPRMQ3LIE5 342 aa15.82■□□□□ 0.12
HMGN4-201ENST00000377575 IFT20Q8IY31 132 aa15.82■□□□□ 0.12
HMGN4-201ENST00000377575 CA13Q8N1Q1 262 aa15.82■□□□□ 0.12
HMGN4-201ENST00000377575 FAM26EQ8N5C1 309 aa15.82■□□□□ 0.12
HMGN4-201ENST00000377575 ARMC2Q8NEN0 867 aa15.82■□□□□ 0.12
HMGN4-201ENST00000377575 OR2L5Q8NG80 312 aa15.82■□□□□ 0.12
HMGN4-201ENST00000377575 M1APQ8TC57 530 aa15.82■□□□□ 0.12
HMGN4-201ENST00000377575 AICDAQ9GZX7 198 aa15.82■□□□□ 0.12
HMGN4-201ENST00000377575 RNF32Q9H0A6 362 aa15.82■□□□□ 0.12
HMGN4-201ENST00000377575 VPS11Q9H270 941 aa15.82■□□□□ 0.12
HMGN4-201ENST00000377575 RHBGQ9H310 441 aa15.82■□□□□ 0.12
HMGN4-201ENST00000377575 COPS7BQ9H9Q2 264 aaPredicted RBP15.82■□□□□ 0.12
HMGN4-201ENST00000377575 ASF1BQ9NVP2 202 aa15.82■□□□□ 0.12
HMGN4-201ENST00000377575 ASB1Q9Y576 335 aa15.82■□□□□ 0.12
HMGN4-201ENST00000377575 ANGPTL3Q9Y5C1 460 aa15.82■□□□□ 0.12
HMGN4-201ENST00000377575 TRAV17A0A0B4J275 112 aa15.81■□□□□ 0.12
HMGN4-201ENST00000377575 CLEC18AA5D8T8 446 aa15.81■□□□□ 0.12
HMGN4-201ENST00000377575 TCP11X1B4DZS4 312 aa15.81■□□□□ 0.12
HMGN4-201ENST00000377575 B3GALT2O43825 422 aa15.81■□□□□ 0.12
HMGN4-201ENST00000377575 PRAMEF4O60810 478 aa15.81■□□□□ 0.12
HMGN4-201ENST00000377575 DNAJB6O75190 326 aa15.81■□□□□ 0.12
HMGN4-201ENST00000377575 EPB42P16452 691 aa15.81■□□□□ 0.12
HMGN4-201ENST00000377575 EPORP19235 508 aa15.81■□□□□ 0.12
HMGN4-201ENST00000377575 CD22P20273 847 aa15.81■□□□□ 0.12
HMGN4-201ENST00000377575 CASP2P42575 452 aa15.81■□□□□ 0.12
HMGN4-201ENST00000377575 MSH2P43246 934 aa15.81■□□□□ 0.12
HMGN4-201ENST00000377575 ALDH18A1P54886 795 aaKnown RBP15.81■□□□□ 0.12
HMGN4-201ENST00000377575 ZNF33BQ06732 778 aa15.81■□□□□ 0.12
HMGN4-201ENST00000377575 PTPN13Q12923 2485 aa15.81■□□□□ 0.12
HMGN4-201ENST00000377575 E2F2Q14209 437 aa15.81■□□□□ 0.12
HMGN4-201ENST00000377575 NAA30Q147X3 362 aaPredicted RBP15.81■□□□□ 0.12
HMGN4-201ENST00000377575 SETDB1Q15047 1291 aa15.81■□□□□ 0.12
HMGN4-201ENST00000377575 LRRK2Q5S007 2527 aa15.81■□□□□ 0.12
HMGN4-201ENST00000377575 PRAMEF9Q5VWM5 478 aa15.81■□□□□ 0.12
HMGN4-201ENST00000377575 CLEC18BQ6UXF7 455 aa15.81■□□□□ 0.12
HMGN4-201ENST00000377575 SETXQ7Z333 2677 aaKnown RBP15.81■□□□□ 0.12
HMGN4-201ENST00000377575 VN1R5Q7Z5H4 357 aa15.81■□□□□ 0.12
HMGN4-201ENST00000377575 CLEC18CQ8NCF0 446 aa15.81■□□□□ 0.12
HMGN4-201ENST00000377575 SRFBP1Q8NEF9 429 aaKnown RBP15.81■□□□□ 0.12
HMGN4-201ENST00000377575 HAS2Q92819 552 aa15.81■□□□□ 0.12
HMGN4-201ENST00000377575 ISL2Q96A47 359 aa15.81■□□□□ 0.12
HMGN4-201ENST00000377575 C19orf60Q96EN9 201 aa15.81■□□□□ 0.12
HMGN4-201ENST00000377575 PTCHD1Q96NR3 888 aa15.81■□□□□ 0.12
HMGN4-201ENST00000377575 KCNK13Q9HB14 408 aa15.81■□□□□ 0.12
HMGN4-201ENST00000377575 MMP25Q9NPA2 562 aa15.81■□□□□ 0.12
HMGN4-201ENST00000377575 PRDM9Q9NQV7 894 aa15.81■□□□□ 0.12
HMGN4-201ENST00000377575 ABI3Q9P2A4 366 aa15.81■□□□□ 0.12
HMGN4-201ENST00000377575 ZNF180Q9UJW8 692 aa15.81■□□□□ 0.12
HMGN4-201ENST00000377575 ZNF490Q9ULM2 529 aaPredicted RBP15.81■□□□□ 0.12
HMGN4-201ENST00000377575 MRPS33Q9Y291 106 aaKnown RBP15.81■□□□□ 0.12
HMGN4-201ENST00000377575 MMACHCQ9Y4U1 282 aa15.81■□□□□ 0.12
HMGN4-201ENST00000377575 DOPEY2Q9Y3R5 2298 aa15.8■□□□□ 0.12
HMGN4-201ENST00000377575 A0A0G2JN53 185 aa15.8■□□□□ 0.12
HMGN4-201ENST00000377575 MYBL2P10244 700 aa15.8■□□□□ 0.12
HMGN4-201ENST00000377575 PCNAP12004 261 aa15.8■□□□□ 0.12
HMGN4-201ENST00000377575 MTHFD2P13995 350 aa15.8■□□□□ 0.12
HMGN4-201ENST00000377575 MAGEA12P43365 314 aa15.8■□□□□ 0.12
HMGN4-201ENST00000377575 PIK3CGP48736 1102 aa15.8■□□□□ 0.12
HMGN4-201ENST00000377575 TNFSF10P50591 281 aa15.8■□□□□ 0.12
HMGN4-201ENST00000377575 PLA2G16P53816 162 aa15.8■□□□□ 0.12
HMGN4-201ENST00000377575 MTTPP55157 894 aa15.8■□□□□ 0.12
HMGN4-201ENST00000377575 RAB38P57729 211 aa15.8■□□□□ 0.12
HMGN4-201ENST00000377575 TAS2R50P59544 299 aa15.8■□□□□ 0.12
HMGN4-201ENST00000377575 PCDH1Q08174 1060 aa15.8■□□□□ 0.12
HMGN4-201ENST00000377575 RCN2Q14257 317 aa15.8■□□□□ 0.12
HMGN4-201ENST00000377575 NR6A1Q15406 480 aa15.8■□□□□ 0.12
HMGN4-201ENST00000377575 INAQ16352 499 aa15.8■□□□□ 0.12
HMGN4-201ENST00000377575 PFKFB4Q16877 469 aa15.8■□□□□ 0.12
HMGN4-201ENST00000377575 FHL5Q5TD97 284 aa15.8■□□□□ 0.12
HMGN4-201ENST00000377575 GRHL2Q6ISB3 625 aa15.8■□□□□ 0.12
HMGN4-201ENST00000377575 MED27Q6P2C8 311 aa15.8■□□□□ 0.12
HMGN4-201ENST00000377575 FAM180AQ6UWF9 173 aa15.8■□□□□ 0.12
HMGN4-201ENST00000377575 SUN3Q8TAQ9 357 aa15.8■□□□□ 0.12
HMGN4-201ENST00000377575 ZNF354BQ96LW1 612 aa15.8■□□□□ 0.12
HMGN4-201ENST00000377575 MAGEB10Q96LZ2 347 aaPredicted RBP15.8■□□□□ 0.12
HMGN4-201ENST00000377575 KCNC2Q96PR1 638 aa15.8■□□□□ 0.12
HMGN4-201ENST00000377575 SERINC2Q96SA4 455 aa15.8■□□□□ 0.12
HMGN4-201ENST00000377575 ROGDIQ9GZN7 287 aa15.8■□□□□ 0.12
HMGN4-201ENST00000377575 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.8■□□□□ 0.12
HMGN4-201ENST00000377575 PLA2G3Q9NZ20 509 aa15.8■□□□□ 0.12
HMGN4-201ENST00000377575 CPSF2Q9P2I0 782 aaKnown RBP15.8■□□□□ 0.12
HMGN4-201ENST00000377575 TMCO1Q9UM00 188 aa15.8■□□□□ 0.12
HMGN4-201ENST00000377575 NFU1Q9UMS0 254 aa15.8■□□□□ 0.12
HMGN4-201ENST00000377575 TNPO3Q9Y5L0 923 aaKnown RBP15.8■□□□□ 0.12
HMGN4-201ENST00000377575 EXOC1LA0A1B0GW35 172 aa15.79■□□□□ 0.12
HMGN4-201ENST00000377575 TCRBV16S1A1N1A0A5B0 115 aa15.79■□□□□ 0.12
HMGN4-201ENST00000377575 SYNDIG1LA6NDD5 238 aa15.79■□□□□ 0.12
HMGN4-201ENST00000377575 A8MUI8 341 aa15.79■□□□□ 0.12
HMGN4-201ENST00000377575 POC1B-GALNT4F8VUJ3 575 aa15.79■□□□□ 0.12
HMGN4-201ENST00000377575 KLK8O60259 260 aa15.79■□□□□ 0.12
HMGN4-201ENST00000377575 WDPCPO95876 746 aa15.79■□□□□ 0.12
HMGN4-201ENST00000377575 ABHD2P08910 425 aa15.79■□□□□ 0.12
HMGN4-201ENST00000377575 RBP1P09455 135 aa15.79■□□□□ 0.12
HMGN4-201ENST00000377575 MAOAP21397 527 aa15.79■□□□□ 0.12
HMGN4-201ENST00000377575 SLC26A5P58743 744 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms