RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 HRH2P25021 359 aa14.93□□□□□ -0.02
FXN-201ENST00000377270 RGRP47804 291 aa14.93□□□□□ -0.02
FXN-201ENST00000377270 EEFSECP57772 596 aaKnown RBP14.93□□□□□ -0.02
FXN-201ENST00000377270 TIAL1Q01085 375 aaKnown RBP eCLIP14.93□□□□□ -0.02
FXN-201ENST00000377270 KCNAB2Q13303 367 aa14.93□□□□□ -0.02
FXN-201ENST00000377270 ALKBH1Q13686 389 aaKnown RBP14.93□□□□□ -0.02
FXN-201ENST00000377270 NFYCQ13952 458 aa14.93□□□□□ -0.02
FXN-201ENST00000377270 ZNF678Q5SXM1 525 aa14.93□□□□□ -0.02
FXN-201ENST00000377270 ZNF566Q969W8 418 aa14.93□□□□□ -0.02
FXN-201ENST00000377270 CCDC32Q9BV29 185 aa14.93□□□□□ -0.02
FXN-201ENST00000377270 TTLL2Q9BWV7 592 aa14.93□□□□□ -0.02
FXN-201ENST00000377270 KAT8Q9H7Z6 458 aaKnown RBP14.93□□□□□ -0.02
FXN-201ENST00000377270 NIT2Q9NQR4 276 aa14.93□□□□□ -0.02
FXN-201ENST00000377270 TET1Q8NFU7 2136 aa14.93□□□□□ -0.02
FXN-201ENST00000377270 PNMA8CA0A1B0GUJ8 204 aa14.93□□□□□ -0.02
FXN-201ENST00000377270 XPNPEP2O43895 674 aa14.93□□□□□ -0.02
FXN-201ENST00000377270 TULP3O75386 442 aa14.93□□□□□ -0.02
FXN-201ENST00000377270 CD1DP15813 335 aa14.93□□□□□ -0.02
FXN-201ENST00000377270 OR1D2P34982 312 aa14.93□□□□□ -0.02
FXN-201ENST00000377270 HSF2Q03933 536 aa14.93□□□□□ -0.02
FXN-201ENST00000377270 SMAD4Q13485 552 aaKnown RBP14.93□□□□□ -0.02
FXN-201ENST00000377270 REPS1Q96D71 796 aa14.93□□□□□ -0.02
FXN-201ENST00000377270 CDKN2AIPNLQ96HQ2 116 aa14.93□□□□□ -0.02
FXN-201ENST00000377270 FRMD6Q96NE9 622 aa14.93□□□□□ -0.02
FXN-201ENST00000377270 TRIB3Q96RU7 358 aa14.93□□□□□ -0.02
FXN-201ENST00000377270 MGME1Q9BQP7 344 aa14.93□□□□□ -0.02
FXN-201ENST00000377270 ERVK-18Q9QC07 812 aa14.93□□□□□ -0.02
FXN-201ENST00000377270 A0A1W2PP18 115 aa14.92□□□□□ -0.02
FXN-201ENST00000377270 SIGLEC6O43699 453 aa14.92□□□□□ -0.02
FXN-201ENST00000377270 EIF3GO75821 320 aaKnown RBP eCLIP14.92□□□□□ -0.02
FXN-201ENST00000377270 MATN4O95460 622 aa14.92□□□□□ -0.02
FXN-201ENST00000377270 VAMP1P23763 118 aa14.92□□□□□ -0.02
FXN-201ENST00000377270 HLA-DMAP28067 261 aa14.92□□□□□ -0.02
FXN-201ENST00000377270 HTR1EP28566 365 aa14.92□□□□□ -0.02
FXN-201ENST00000377270 BMP8BP34820 402 aa14.92□□□□□ -0.02
FXN-201ENST00000377270 CDH4P55283 916 aa14.92□□□□□ -0.02
FXN-201ENST00000377270 CDH13P55290 713 aa14.92□□□□□ -0.02
FXN-201ENST00000377270 UNC50Q53HI1 259 aa14.92□□□□□ -0.02
FXN-201ENST00000377270 BMP8AQ7Z5Y6 402 aa14.92□□□□□ -0.02
FXN-201ENST00000377270 OR5T2Q8NGG2 359 aa14.92□□□□□ -0.02
FXN-201ENST00000377270 PXYLP1Q8TE99 480 aa14.92□□□□□ -0.02
FXN-201ENST00000377270 EXOSC8Q96B26 276 aaKnown RBP14.92□□□□□ -0.02
FXN-201ENST00000377270 L3HYPDHQ96EM0 354 aa14.92□□□□□ -0.02
FXN-201ENST00000377270 MYO19Q96H55 970 aa14.92□□□□□ -0.02
FXN-201ENST00000377270 NSMCE2Q96MF7 247 aa14.92□□□□□ -0.02
FXN-201ENST00000377270 GKN1Q9NS71 199 aa14.92□□□□□ -0.02
FXN-201ENST00000377270 THUMPD1Q9NXG2 353 aaKnown RBP14.92□□□□□ -0.02
FXN-201ENST00000377270 INVSQ9Y283 1065 aa14.92□□□□□ -0.02
FXN-201ENST00000377270 LOC100130705A0A1B0GUX0 176 aa14.92□□□□□ -0.02
FXN-201ENST00000377270 UBA6A0AVT1 1052 aaPredicted RBP14.92□□□□□ -0.02
FXN-201ENST00000377270 H3BNC9 293 aa14.92□□□□□ -0.02
FXN-201ENST00000377270 NOBOXO60393 691 aa14.92□□□□□ -0.02
FXN-201ENST00000377270 CBX7O95931 251 aa14.92□□□□□ -0.02
FXN-201ENST00000377270 RAF1P04049 648 aa14.92□□□□□ -0.02
FXN-201ENST00000377270 CYBBP04839 570 aa14.92□□□□□ -0.02
FXN-201ENST00000377270 RAP2AP10114 183 aa14.92□□□□□ -0.02
FXN-201ENST00000377270 PBLDP30039 288 aaPredicted RBP14.92□□□□□ -0.02
FXN-201ENST00000377270 CD6P30203 668 aa14.92□□□□□ -0.02
FXN-201ENST00000377270 STC1P52823 247 aa14.92□□□□□ -0.02
FXN-201ENST00000377270 CHAF1BQ13112 559 aa14.92□□□□□ -0.02
FXN-201ENST00000377270 EXOSC2Q13868 293 aaKnown RBP14.92□□□□□ -0.02
FXN-201ENST00000377270 FAM76BQ5HYJ3 339 aa14.92□□□□□ -0.02
FXN-201ENST00000377270 ZNF691Q5VV52 312 aa14.92□□□□□ -0.02
FXN-201ENST00000377270 GLYATQ6IB77 296 aa14.92□□□□□ -0.02
FXN-201ENST00000377270 TMEM175Q9BSA9 504 aa14.92□□□□□ -0.02
FXN-201ENST00000377270 TRMOQ9BU70 441 aa14.92□□□□□ -0.02
FXN-201ENST00000377270 SLC52A3Q9NQ40 469 aa14.92□□□□□ -0.02
FXN-201ENST00000377270 BIN3Q9NQY0 253 aa14.92□□□□□ -0.02
FXN-201ENST00000377270 MIOXQ9UGB7 285 aa14.92□□□□□ -0.02
FXN-201ENST00000377270 hCG_1807616A0A1W2PRN6 198 aa14.91□□□□□ -0.02
FXN-201ENST00000377270 ZNF840PA6NDX5 716 aa14.91□□□□□ -0.02
FXN-201ENST00000377270 C2orf74A8MZ97 194 aa14.91□□□□□ -0.02
FXN-201ENST00000377270 H7C2Y5 167 aa14.91□□□□□ -0.02
FXN-201ENST00000377270 TERTO14746 1132 aaKnown RBP14.91□□□□□ -0.02
FXN-201ENST00000377270 COCHO43405 550 aa14.91□□□□□ -0.02
FXN-201ENST00000377270 HRO43593 1189 aa14.91□□□□□ -0.02
FXN-201ENST00000377270 KDELR3O43731 214 aa14.91□□□□□ -0.02
FXN-201ENST00000377270 TSPAN3O60637 253 aa14.91□□□□□ -0.02
FXN-201ENST00000377270 DHFRP00374 187 aa14.91□□□□□ -0.02
FXN-201ENST00000377270 IGHV2-70P01814 119 aa14.91□□□□□ -0.02
FXN-201ENST00000377270 KLKB1P03952 638 aa14.91□□□□□ -0.02
FXN-201ENST00000377270 CDK5R2Q13319 367 aa14.91□□□□□ -0.02
FXN-201ENST00000377270 TRIM60Q495X7 471 aa14.91□□□□□ -0.02
FXN-201ENST00000377270 TCTE1Q5JU00 501 aa14.91□□□□□ -0.02
FXN-201ENST00000377270 HECTD3Q5T447 861 aa14.91□□□□□ -0.02
FXN-201ENST00000377270 BLOC1S3Q6QNY0 202 aa14.91□□□□□ -0.02
FXN-201ENST00000377270 ANGPTL8Q6UXH0 198 aa14.91□□□□□ -0.02
FXN-201ENST00000377270 PTGR2Q8N8N7 351 aaPredicted RBP14.91□□□□□ -0.02
FXN-201ENST00000377270 SLC13A3Q8WWT9 602 aa14.91□□□□□ -0.02
FXN-201ENST00000377270 HYLS1Q96M11 299 aa14.91□□□□□ -0.02
FXN-201ENST00000377270 SMIM14Q96QK8 99 aa14.91□□□□□ -0.02
FXN-201ENST00000377270 ERVK-6Q9BXR3 956 aa14.91□□□□□ -0.02
FXN-201ENST00000377270 UFSP2Q9NUQ7 469 aa14.91□□□□□ -0.02
FXN-201ENST00000377270 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.91□□□□□ -0.02
FXN-201ENST00000377270 LOC390937A0A1W2PQ73 354 aa14.91□□□□□ -0.02
FXN-201ENST00000377270 B4DXG7 233 aa14.91□□□□□ -0.02
FXN-201ENST00000377270 CBX4O00257 560 aa14.91□□□□□ -0.02
FXN-201ENST00000377270 STX16O14662 325 aa14.91□□□□□ -0.02
FXN-201ENST00000377270 DSCR3O14972 297 aa14.91□□□□□ -0.02
FXN-201ENST00000377270 INSIG1O15503 277 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms