RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 ARNT2Q9HBZ2 717 aa13.11□□□□□ -0.31
C9orf47-203ENST00000375851 LYARQ9NX58 379 aaKnown RBP13.11□□□□□ -0.31
C9orf47-203ENST00000375851 SCDO00767 359 aa13.11□□□□□ -0.31
C9orf47-203ENST00000375851 ACOX3O15254 700 aa13.11□□□□□ -0.31
C9orf47-203ENST00000375851 LDOC1O95751 146 aaPredicted RBP13.11□□□□□ -0.31
C9orf47-203ENST00000375851 FESP07332 822 aa13.11□□□□□ -0.31
C9orf47-203ENST00000375851 TGFBR2P37173 567 aa13.11□□□□□ -0.31
C9orf47-203ENST00000375851 NFE2L1Q14494 772 aa13.11□□□□□ -0.31
C9orf47-203ENST00000375851 DEFB134Q4QY38 66 aa13.11□□□□□ -0.31
C9orf47-203ENST00000375851 IDNKQ5T6J7 187 aa13.11□□□□□ -0.31
C9orf47-203ENST00000375851 ARHGAP40Q5TG30 622 aa13.11□□□□□ -0.31
C9orf47-203ENST00000375851 HSDL2Q6YN16 418 aa13.11□□□□□ -0.31
C9orf47-203ENST00000375851 ASRGL1Q7L266 308 aa13.11□□□□□ -0.31
C9orf47-203ENST00000375851 CBARPQ8N350 705 aaPredicted RBP13.11□□□□□ -0.31
C9orf47-203ENST00000375851 SLC12A9Q9BXP2 914 aa13.11□□□□□ -0.31
C9orf47-203ENST00000375851 ITPAQ9BY32 194 aa13.11□□□□□ -0.31
C9orf47-203ENST00000375851 GSTO2Q9H4Y5 243 aa13.11□□□□□ -0.31
C9orf47-203ENST00000375851 PLEKHA1Q9HB21 404 aa13.11□□□□□ -0.31
C9orf47-203ENST00000375851 MS4A12Q9NXJ0 267 aa13.11□□□□□ -0.31
C9orf47-203ENST00000375851 ANXA2P2A6NMY6 339 aa13.11□□□□□ -0.31
C9orf47-203ENST00000375851 ANXA2P07355 339 aaKnown RBP13.11□□□□□ -0.31
C9orf47-203ENST00000375851 ZNF12P17014 697 aa13.11□□□□□ -0.31
C9orf47-203ENST00000375851 KCNA5P22460 613 aa13.11□□□□□ -0.31
C9orf47-203ENST00000375851 DECR1Q16698 335 aa13.11□□□□□ -0.31
C9orf47-203ENST00000375851 FBXO43Q4G163 708 aa13.11□□□□□ -0.31
C9orf47-203ENST00000375851 NXPE4Q6UWF7 544 aa13.11□□□□□ -0.31
C9orf47-203ENST00000375851 BTN2A1Q7KYR7 527 aa13.11□□□□□ -0.31
C9orf47-203ENST00000375851 SLC29A4Q7RTT9 530 aa13.11□□□□□ -0.31
C9orf47-203ENST00000375851 TCEANCQ8N8B7 351 aa13.11□□□□□ -0.31
C9orf47-203ENST00000375851 KCTD7Q96MP8 289 aa13.11□□□□□ -0.31
C9orf47-203ENST00000375851 MVB12BQ9H7P6 319 aa13.11□□□□□ -0.31
C9orf47-203ENST00000375851 RC3H2Q9HBD1 1191 aaKnown RBP13.11□□□□□ -0.31
C9orf47-203ENST00000375851 CYP8B1Q9UNU6 501 aa13.11□□□□□ -0.31
C9orf47-203ENST00000375851 BTAF1O14981 1849 aa13.11□□□□□ -0.31
C9orf47-203ENST00000375851 ITGB4P16144 1822 aa13.11□□□□□ -0.31
C9orf47-203ENST00000375851 ADRB3P13945 408 aa13.11□□□□□ -0.31
C9orf47-203ENST00000375851 HRH2P25021 359 aa13.11□□□□□ -0.31
C9orf47-203ENST00000375851 GBX2P52951 348 aaPredicted RBP13.11□□□□□ -0.31
C9orf47-203ENST00000375851 CDH11P55287 796 aa13.11□□□□□ -0.31
C9orf47-203ENST00000375851 C1orf61Q13536 156 aa13.11□□□□□ -0.31
C9orf47-203ENST00000375851 ZNF267Q14586 743 aaPredicted RBP13.11□□□□□ -0.31
C9orf47-203ENST00000375851 TAZQ16635 292 aa13.11□□□□□ -0.31
C9orf47-203ENST00000375851 SPRED3Q2MJR0 410 aa13.11□□□□□ -0.31
C9orf47-203ENST00000375851 PLA2G15Q8NCC3 412 aa13.11□□□□□ -0.31
C9orf47-203ENST00000375851 MDGA1Q8NFP4 955 aa13.11□□□□□ -0.31
C9orf47-203ENST00000375851 DIABLOQ9NR28 239 aa13.11□□□□□ -0.31
C9orf47-203ENST00000375851 TREX1Q9NSU2 369 aa13.11□□□□□ -0.31
C9orf47-203ENST00000375851 MID1O15344 667 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 ABCB7O75027 752 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 CA3P07451 260 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 NTSR1P30989 418 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 LBX1P52954 281 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 PPP3R1P63098 170 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 COQ5Q5HYK3 327 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 SHQ1Q6PI26 577 aaKnown RBP13.1□□□□□ -0.31
C9orf47-203ENST00000375851 ZNF773Q6PK81 442 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 NRROSQ86YC3 692 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 SLC22A15Q8IZD6 547 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 PHOSPHO1Q8TCT1 267 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 JPH3Q8WXH2 748 aaPredicted RBP13.1□□□□□ -0.31
C9orf47-203ENST00000375851 PIGKQ92643 395 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 RNF38Q9H0F5 515 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 MGAT4BQ9UQ53 548 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 MYH7BA7E2Y1 1941 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 C2orf74A8MZ97 194 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 FGF4P08620 206 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 OR12D1P0DN82 309 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 KCNC1P48547 511 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 ABATP80404 500 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 SLAMF1Q13291 335 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 TRAM2Q15035 370 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 KIAA0319Q5VV43 1072 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 ARL9Q6T311 187 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 ASPGQ86U10 573 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 ARRDC2Q8TBH0 407 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 DOHHQ9BU89 302 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 OR8D2Q9GZM6 311 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 TCRBV21S2A2A0A5A6 115 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 RPS3P23396 243 aaKnown RBP eCLIP13.1□□□□□ -0.31
C9orf47-203ENST00000375851 VSX2P58304 361 aaPredicted RBP13.1□□□□□ -0.31
C9orf47-203ENST00000375851 WDR5P61964 334 aaKnown RBP13.1□□□□□ -0.31
C9orf47-203ENST00000375851 TLR1Q15399 786 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 LETMD1Q6P1Q0 360 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 CARM1Q86X55 608 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 ZNF676Q8N7Q3 588 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 GPR26Q8NDV2 337 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 CNDP2Q96KP4 475 aaKnown RBP13.1□□□□□ -0.31
C9orf47-203ENST00000375851 GAL3ST1Q99999 423 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 DPH2Q9BQC3 489 aaPredicted RBP13.1□□□□□ -0.31
C9orf47-203ENST00000375851 TUBA8Q9NY65 449 aaPredicted RBP13.1□□□□□ -0.31
C9orf47-203ENST00000375851 DNAJC27Q9NZQ0 273 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 GMEB2Q9UKD1 530 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 LOC285095A0A1B0GVY8 99 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 KLHL33A6NCF5 533 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 FAM25EA8MYX2 175 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 C9J4A7 227 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 IFI30P13284 250 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 PFKLP17858 780 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 AGXTP21549 392 aa13.1□□□□□ -0.31
C9orf47-203ENST00000375851 ZNF423Q2M1K9 1284 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms