RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 SEC14L3Q9UDX4 400 aa11.5□□□□□ -0.57
LSM2-208ENST00000375661 C3orf18Q9UK00 162 aa11.5□□□□□ -0.57
LSM2-208ENST00000375661 CDC14AQ9UNH5 594 aa11.5□□□□□ -0.57
LSM2-208ENST00000375661 SLC22A14Q9Y267 594 aa11.5□□□□□ -0.57
LSM2-208ENST00000375661 MAU2Q9Y6X3 613 aa11.5□□□□□ -0.57
LSM2-208ENST00000375661 SCN2AQ99250 2005 aa11.5□□□□□ -0.57
LSM2-208ENST00000375661 HEATR5BQ9P2D3 2071 aa11.49□□□□□ -0.57
LSM2-208ENST00000375661 COPEO14579 308 aa11.49□□□□□ -0.57
LSM2-208ENST00000375661 PRPF4O43172 522 aaKnown RBP eCLIP11.49□□□□□ -0.57
LSM2-208ENST00000375661 NRP2O60462 931 aa11.49□□□□□ -0.57
LSM2-208ENST00000375661 GLRA3O75311 464 aa11.49□□□□□ -0.57
LSM2-208ENST00000375661 WFS1O76024 890 aa11.49□□□□□ -0.57
LSM2-208ENST00000375661 S100BP04271 92 aaPredicted RBP11.49□□□□□ -0.57
LSM2-208ENST00000375661 ICAM2P13598 275 aa11.49□□□□□ -0.57
LSM2-208ENST00000375661 CCND1P24385 295 aa11.49□□□□□ -0.57
LSM2-208ENST00000375661 CMPK1P30085 196 aa11.49□□□□□ -0.57
LSM2-208ENST00000375661 SSTR2P30874 369 aa11.49□□□□□ -0.57
LSM2-208ENST00000375661 CCT5P48643 541 aa11.49□□□□□ -0.57
LSM2-208ENST00000375661 HSPA7P48741 367 aa11.49□□□□□ -0.57
LSM2-208ENST00000375661 AGTR2P50052 363 aa11.49□□□□□ -0.57
LSM2-208ENST00000375661 VSX2P58304 361 aaPredicted RBP11.49□□□□□ -0.57
LSM2-208ENST00000375661 PFKFB4Q16877 469 aa11.49□□□□□ -0.57
LSM2-208ENST00000375661 KRTAP21-3Q3LHN1 58 aa11.49□□□□□ -0.57
LSM2-208ENST00000375661 THEMIS2Q5TEJ8 643 aa11.49□□□□□ -0.57
LSM2-208ENST00000375661 ZNF425Q6IV72 752 aa11.49□□□□□ -0.57
LSM2-208ENST00000375661 RNF44Q7L0R7 432 aa11.49□□□□□ -0.57
LSM2-208ENST00000375661 CROCCP2Q86T23 111 aa11.49□□□□□ -0.57
LSM2-208ENST00000375661 EXOC3L1Q86VI1 746 aa11.49□□□□□ -0.57
LSM2-208ENST00000375661 THOC6Q86W42 341 aaKnown RBP11.49□□□□□ -0.57
LSM2-208ENST00000375661 UBTD2Q8WUN7 234 aa11.49□□□□□ -0.57
LSM2-208ENST00000375661 PGM2Q96G03 612 aa11.49□□□□□ -0.57
LSM2-208ENST00000375661 DPH7Q9BTV6 452 aa11.49□□□□□ -0.57
LSM2-208ENST00000375661 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.49□□□□□ -0.57
LSM2-208ENST00000375661 PCBD2Q9H0N5 130 aa11.49□□□□□ -0.57
LSM2-208ENST00000375661 MRPS30Q9NP92 439 aaKnown RBP11.49□□□□□ -0.57
LSM2-208ENST00000375661 C14orf105Q9NVL8 296 aa11.49□□□□□ -0.57
LSM2-208ENST00000375661 MKS1Q9NXB0 559 aa11.49□□□□□ -0.57
LSM2-208ENST00000375661 PLA2G3Q9NZ20 509 aa11.49□□□□□ -0.57
LSM2-208ENST00000375661 CACNA1CQ13936 2221 aa11.48□□□□□ -0.57
LSM2-208ENST00000375661 POLQO75417 2590 aa11.48□□□□□ -0.57
LSM2-208ENST00000375661 LOC102723996A0A087X1L8 192 aa11.48□□□□□ -0.57
LSM2-208ENST00000375661 IGHV1-45A0A0A0MS14 117 aa11.48□□□□□ -0.57
LSM2-208ENST00000375661 OR2A25A4D2G3 310 aa11.48□□□□□ -0.57
LSM2-208ENST00000375661 LRRC14BA6NHZ5 514 aa11.48□□□□□ -0.57
LSM2-208ENST00000375661 PLIN3O60664 434 aa11.48□□□□□ -0.57
LSM2-208ENST00000375661 PRAMEF2O60811 474 aa11.48□□□□□ -0.57
LSM2-208ENST00000375661 CTSVO60911 334 aa11.48□□□□□ -0.57
LSM2-208ENST00000375661 SPAG7O75391 227 aa11.48□□□□□ -0.57
LSM2-208ENST00000375661 STK16O75716 305 aa11.48□□□□□ -0.57
LSM2-208ENST00000375661 WDR47O94967 919 aa11.48□□□□□ -0.57
LSM2-208ENST00000375661 CCNDBP1O95273 360 aa11.48□□□□□ -0.57
LSM2-208ENST00000375661 PROCP04070 461 aa11.48□□□□□ -0.57
LSM2-208ENST00000375661 GFAPP14136 432 aa11.48□□□□□ -0.57
LSM2-208ENST00000375661 FBLP22087 321 aaKnown RBP11.48□□□□□ -0.57
LSM2-208ENST00000375661 SMSP52788 366 aa11.48□□□□□ -0.57
LSM2-208ENST00000375661 EMP2P54851 167 aa11.48□□□□□ -0.57
LSM2-208ENST00000375661 ABATP80404 500 aa11.48□□□□□ -0.57
LSM2-208ENST00000375661 SETDB1Q15047 1291 aa11.48□□□□□ -0.57
LSM2-208ENST00000375661 FBXO42Q6P3S6 717 aa11.48□□□□□ -0.57
LSM2-208ENST00000375661 HDXQ7Z353 690 aa11.48□□□□□ -0.57
LSM2-208ENST00000375661 METTL27Q8N6F8 245 aaPredicted RBP11.48□□□□□ -0.57
LSM2-208ENST00000375661 PTGR2Q8N8N7 351 aaPredicted RBP11.48□□□□□ -0.57
LSM2-208ENST00000375661 C8orf44Q96CB5 159 aa11.48□□□□□ -0.57
LSM2-208ENST00000375661 APOPT1Q96IL0 206 aa11.48□□□□□ -0.57
LSM2-208ENST00000375661 PLCD4Q9BRC7 762 aa11.48□□□□□ -0.57
LSM2-208ENST00000375661 HAUS8Q9BT25 410 aa11.48□□□□□ -0.57
LSM2-208ENST00000375661 CD244Q9BZW8 370 aa11.48□□□□□ -0.57
LSM2-208ENST00000375661 CENPHQ9H3R5 247 aa11.48□□□□□ -0.57
LSM2-208ENST00000375661 SYNPO2LQ9H987 977 aa11.48□□□□□ -0.57
LSM2-208ENST00000375661 TMBIM4Q9HC24 238 aa11.48□□□□□ -0.57
LSM2-208ENST00000375661 GRID1Q9ULK0 1009 aa11.48□□□□□ -0.57
LSM2-208ENST00000375661 PCDHGB6Q9Y5F9 930 aa11.48□□□□□ -0.57
LSM2-208ENST00000375661 CSMD2Q7Z408 3487 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 PCNX1Q96RV3 2341 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 OR5H15A6NDH6 313 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 A8MT66 165 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 IDSB3KWA1 339 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 G3V2L1 256 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 STX16-NPEPL1H3BU86 382 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 H7BY64 318 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 STX16O14662 325 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 TYROBPO43914 113 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 DLX3O60479 287 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 PRAMEF4O60810 478 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 SASH3O75995 380 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 SIX3O95343 332 aaPredicted RBP11.47□□□□□ -0.57
LSM2-208ENST00000375661 MED26O95402 600 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 MLYCDO95822 493 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 WDPCPO95876 746 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 MYZAPP0CAP1 466 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 CDH1P12830 882 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 EPORP19235 508 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 MST1P26927 711 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 ALDH18A1P54886 795 aaKnown RBP11.47□□□□□ -0.57
LSM2-208ENST00000375661 DSG2Q14126 1118 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 PCBP2Q15366 365 aaKnown RBP eCLIP11.47□□□□□ -0.57
LSM2-208ENST00000375661 PRTGQ2VWP7 1150 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 CATSPEREQ5SY80 951 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 PRAMEF9Q5VWM5 478 aa11.47□□□□□ -0.57
LSM2-208ENST00000375661 FRMPD2BQ6IN97 320 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms