RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 DSC2Q02487 901 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 TMEM205Q6UW68 189 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 SPATA22Q8NHS9 363 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 OR5P2Q8WZ92 322 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 HMCESQ96FZ2 354 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 MROQ9BYG7 248 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 TREM1Q9NP99 234 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 MED17Q9NVC6 651 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 CDHR4A6H8M9 788 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 CERS1P27544 350 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 GKP32189 559 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 WNT4P56705 351 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 SAMD12Q8N8I0 201 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 SMAD5Q99717 465 aaKnown RBP9.84□□□□□ -0.83
PTCH1-204ENST00000375290 APOBEC3GQ9HC16 384 aaKnown RBP9.84□□□□□ -0.83
PTCH1-204ENST00000375290 CXorf49A8MYA2 514 aaPredicted RBP9.84□□□□□ -0.83
PTCH1-204ENST00000375290 FOXO6A8MYZ6 492 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 CKMT1AP12532 417 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 PAQR3Q6TCH7 311 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 UMODL1-AS1Q8N2C9 162 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 NOP16Q9Y3C1 178 aaKnown RBP9.84□□□□□ -0.83
PTCH1-204ENST00000375290 TIMM13Q9Y5L4 95 aaPredicted RBP9.84□□□□□ -0.83
PTCH1-204ENST00000375290 NDUFB5O43674 189 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 NFATC1O95644 943 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 IL1RNP18510 177 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 MEF2DQ14814 521 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 TMEM69Q5SWH9 247 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 MANEALQ5VSG8 457 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 ARHGAP12Q8IWW6 846 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 SLC15A4Q8N697 577 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 A0A1W2PQH9 124 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 CRISP1P54107 249 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 FIP1L1Q6UN15 594 aaKnown RBP9.84□□□□□ -0.83
PTCH1-204ENST00000375290 ARL14Q8N4G2 192 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 RASGEF1AQ8N9B8 481 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 SMAP2Q8WU79 429 aaPredicted RBP9.84□□□□□ -0.83
PTCH1-204ENST00000375290 GIMAP5Q96F15 307 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 G6PC3Q9BUM1 346 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 B3GNT5Q9BYG0 378 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 REEP4Q9H6H4 257 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 ZCCHC3Q9NUD5 404 aaKnown RBP9.84□□□□□ -0.83
PTCH1-204ENST00000375290 MYO10Q9HD67 2058 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 JUNBP17275 347 aaPredicted RBP9.84□□□□□ -0.83
PTCH1-204ENST00000375290 CAPN3P20807 821 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 PRKXP51817 358 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 CLEC20AQ6ZU45 233 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 RIMS3Q9UJD0 308 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 LOC285095A0A1B0GVY8 99 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 SMCO3A2RU48 225 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 OCLNQ16625 522 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 SIDT2Q8NBJ9 832 aaKnown RBP9.84□□□□□ -0.83
PTCH1-204ENST00000375290 MAST2Q6P0Q8 1798 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 M0R036 132 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 HNRNPA0Q13151 305 aaKnown RBP9.84□□□□□ -0.83
PTCH1-204ENST00000375290 CEACAM7Q14002 265 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 GK2Q14410 553 aaPredicted RBP9.84□□□□□ -0.83
PTCH1-204ENST00000375290 TIGD3Q6B0B8 471 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 YIPF4Q9BSR8 244 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 EBF1Q9UH73 591 aa9.84□□□□□ -0.83
PTCH1-204ENST00000375290 A0A0G2JMP0 313 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 C9IYK1 514 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 ENDOD1O94919 500 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 GTF2F2P13984 249 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 CD1DP15813 335 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 CORO1AP31146 461 aaKnown RBP9.83□□□□□ -0.84
PTCH1-204ENST00000375290 NDUFV1P49821 464 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 AKIRIN2Q53H80 203 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 CEACAM20Q6UY09 585 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 Q6ZNX1 250 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 CNTN4Q8IWV2 1026 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 ACBD7Q8N6N7 88 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 OR4M2Q8NGB6 313 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 SMPDL3AQ92484 453 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 CNOT9Q92600 299 aaKnown RBP9.83□□□□□ -0.84
PTCH1-204ENST00000375290 TLX2O43763 284 aaPredicted RBP9.83□□□□□ -0.84
PTCH1-204ENST00000375290 PRAMEF2O60811 474 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 UBBP0CG47 229 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 UBCP0CG48 685 aaKnown RBP9.83□□□□□ -0.84
PTCH1-204ENST00000375290 FOSL1P15407 271 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 ZNF20P17024 532 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 RPS27AP62979 156 aaKnown RBP9.83□□□□□ -0.84
PTCH1-204ENST00000375290 UBA52P62987 128 aaKnown RBP9.83□□□□□ -0.84
PTCH1-204ENST00000375290 FAM110CQ1W6H9 321 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 ADAMTS16Q8TE57 1224 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 UPF1Q92900 1129 aaKnown RBP eCLIP9.83□□□□□ -0.84
PTCH1-204ENST00000375290 NTRK2Q16620 822 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 SCIMPQ6UWF3 145 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 ANKRD46Q86W74 232 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 CHST4Q8NCG5 386 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 OR2AJ1Q8NGZ0 328 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 TRAPPC12Q8WVT3 735 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 CDCA5Q96FF9 252 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 PGAP3Q96FM1 320 aaPredicted RBP9.83□□□□□ -0.84
PTCH1-204ENST00000375290 BPIFA1Q9NP55 256 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 SCML2Q9UQR0 700 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 ATE1O95260 518 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 MAGP20916 626 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 CDH15P55291 814 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 CXCL9Q07325 125 aa9.83□□□□□ -0.84
PTCH1-204ENST00000375290 PPP1R3AQ16821 1122 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms